>gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA,
            complete cds
          Length = 2923

 Score =  285 bits (144), Expect = 6e-74
 Identities = 183/196 (93%)
 Strand = Plus / Minus

                                                                        
Query: 251  gaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcatcca 310
            ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2923 gaggtcgattgagttgttatgccgcaactggatgcctgatgatcccacgcccttcatcga 2864

                                                                        
Query: 311  ggacaaagctgttgtcgttgaagtgagagctggagaagaagggcctcagatcgtagatct 370
            ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 2863 ggacaaagctgttgtcactgaagtgagagctggagaagaacggcctcaggtcgtagatct 2804

                                                                        
Query: 371  catattctcgggccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtg 430
            |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 2803 catattcttgggccttgttcttcaggtcatccactttaacctcaacgtgagtcaggcgtg 2744

                            
Query: 431  tggttgatcccgacac 446
            |||||||||| |||||
Sbjct: 2743 tggttgatccagacac 2728

>gb|AY532593.1| Triticum aestivum minichromosomal maintenance factor (MCM2) gene,
            exons 1 through 18 and complete sequence
          Length = 8809

 Score =  210 bits (106), Expect = 3e-51
 Identities = 161/178 (90%), Gaps = 1/178 (0%)
 Strand = Plus / Minus

                                                                        
Query: 42   gatggcgtcaggtgcatataacactgaattatgacatcaagaaggtacaaacatctctaa 101
            ||||||||||| | |||| ||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 8259 gatggcgtcagttccata-aacactgaattatgatatcaagaaggtacagacatctcgaa 8201

                                                                        
Query: 102  atgccactggaggcataagggtttcagatagcaaacagtacaccaacaccagaattcccg 161
            ||||| ||| ||||| |||||||||||||||||||||||||||||| | ||||| || | 
Sbjct: 8200 atgccgctgtaggcacaagggtttcagatagcaaacagtacaccaatatcagaactctca 8141

                                                                      
Query: 162  taaaacagacacgagcagtcattttgccaacttacactacaagtggacatttctagct 219
             ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 8140 caaaacagacacaagcagtcattttgccgacttacactacaagtggacatttctagct 8083



 Score =  186 bits (94), Expect = 4e-44
 Identities = 127/138 (92%)
 Strand = Plus / Minus

                                                                        
Query: 248  gctgaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcat 307
            ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 8041 gctgatgttgattgagttgttatgctgcaactggatgcctgatgatcccacgcccttcgt 7982

                                                                        
Query: 308  ccaggacaaagctgttgtcgttgaagtgagagctggagaagaagggcctcagatcgtaga 367
            ||||||| |||||||||||| |||||||||||||||||||||| |||||||| |||||||
Sbjct: 7981 ccaggacgaagctgttgtcgctgaagtgagagctggagaagaacggcctcaggtcgtaga 7922

                              
Query: 368  tctcatattctcgggcct 385
            |||| || ||| ||||||
Sbjct: 7921 tctcgtactcttgggcct 7904



 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                        
Query: 383  ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgtggttgatcccg 442
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 7796 ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgcggttgatccca 7737

                
Query: 443  acac 446
            ||||
Sbjct: 7736 acac 7733



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 229  gctcttgaacaaagaggtagctg 251
            |||||||||||||||||||||||
Sbjct: 8085 gctcttgaacaaagaggtagctg 8063

>gb|AY109731.1| Zea mays CL9169_1 mRNA sequence
          Length = 623

 Score =  131 bits (66), Expect = 2e-27
 Identities = 138/162 (85%)
 Strand = Plus / Plus

                                                                       
Query: 279 tggatgcttgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgaga 338
           ||||||| ||||||||||||||||||||||||| |  |||| ||||||  |||||   | 
Sbjct: 178 tggatgcctgatgatcccacgcccttcatccagaaggaagccgttgtccctgaagcacgc 237

                                                                       
Query: 339 gctggagaagaagggcctcagatcgtagatctcatattctcgggccttgttcttcaggtc 398
           |||||||||||| ||| |||||||||||||||| |||||| ||||||||||| |||||||
Sbjct: 238 gctggagaagaacggcttcagatcgtagatctcgtattcttgggccttgttcctcaggtc 297

                                                     
Query: 399 atccactttaacctcgacatgagtcaggcgtgtggttgatcc 440
            |||| ||| |||||||| ||||| || |||| || ||||||
Sbjct: 298 ctccaatttgacctcgacgtgagtaagacgtgaggctgatcc 339

>dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N01, full
            insert sequence
          Length = 3214

 Score =  107 bits (54), Expect = 3e-20
 Identities = 120/142 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 346
            |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 2949 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 2890

                                                                        
Query: 347  agaagggcctcagatcgtagatctcatattctcgggccttgttcttcaggtcatccactt 406
            |||| || ||||| || ||||| || || ||  ||||||||||||||||||| || ||||
Sbjct: 2889 agaacggtctcaggtcatagatttcgtactcctgggccttgttcttcaggtcctctactt 2830

                                  
Query: 407  taacctcgacatgagtcaggcg 428
            |||||||||  |||||||||||
Sbjct: 2829 taacctcgatgtgagtcaggcg 2808

>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15,
              complete sequence
          Length = 149035

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                          
Query: 287    tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 346
              |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 102793 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 102734

                                    
Query: 347    agaagggcctcagatcgtagat 368
              |||| || ||||| || |||||
Sbjct: 102733 agaacggtctcaggtcatagat 102712



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 383    ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 428
              |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 102584 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 102539

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                            
Query: 287      tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 346
                |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 16462194 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 16462135

                                      
Query: 347      agaagggcctcagatcgtagat 368
                |||| || ||||| || |||||
Sbjct: 16462134 agaacggtctcaggtcatagat 16462113



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 383      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 428
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16461985 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16461940

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                            
Query: 287      tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 346
                |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 16553198 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 16553139

                                      
Query: 347      agaagggcctcagatcgtagat 368
                |||| || ||||| || |||||
Sbjct: 16553138 agaacggtctcaggtcatagat 16553117



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 383      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 428
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16552989 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16552944

>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 239    aaagaggtagctgaggttgat 259
              |||||||||||||||||||||
Sbjct: 103298 aaagaggtagctgaggttgat 103318

>gb|AC069426.9| Homo sapiens 3 BAC RP11-200O17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128500

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 385   ttgttcttcaggtcatccactttaacctc 413
             ||||||||||||||| |||||| ||||||
Sbjct: 50709 ttgttcttcaggtcacccacttgaacctc 50737

>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence
          Length = 178764

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   cttcatccaggacaaagctg 321
             ||||||||||||||||||||
Sbjct: 21112 cttcatccaggacaaagctg 21093

>gb|L07355.1|FLANPMEMPT Influenza A virus (A/Memphis/1/1990(H3N2)) segment 5 nucleoprotein
           (NP) gene, partial cds
          Length = 1508

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 358 agatcgtagatctcatattctcgg 381
           |||||| |||||||||||||||||
Sbjct: 784 agatcgaagatctcatattctcgg 807

>gb|CY003067.1| Influenza A virus (A/Memphis/1/90(H3N2)) segment 5, complete
           sequence
          Length = 1516

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 358 agatcgtagatctcatattctcgg 381
           |||||| |||||||||||||||||
Sbjct: 772 agatcgaagatctcatattctcgg 795

>gb|AC100531.15| Mus musculus chromosome 1, clone RP23-147I4, complete sequence
          Length = 202351

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   cttcatccaggacaaagctg 321
             ||||||||||||||||||||
Sbjct: 33699 cttcatccaggacaaagctg 33718

>gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, complete sequence
          Length = 159635

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     aaacatctctaaatgccact 109
              ||||||||||||||||||||
Sbjct: 104407 aaacatctctaaatgccact 104388

>gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, complete sequence
          Length = 177301

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     aaacatctctaaatgccact 109
              ||||||||||||||||||||
Sbjct: 117250 aaacatctctaaatgccact 117231

>gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, complete sequence
          Length = 156721

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aaacatctctaaatgccact 109
             ||||||||||||||||||||
Sbjct: 25257 aaacatctctaaatgccact 25276

>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    gagctggagaagaagggcct 356
              ||||||||||||||||||||
Sbjct: 214396 gagctggagaagaagggcct 214377

>gb|CY008743.1| Influenza A virus (A/Memphis/7/90(H3N2)) segment 5, complete
           sequence
          Length = 1523

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 358 agatcgtagatctcatattctcgg 381
           |||||| |||||||||||||||||
Sbjct: 777 agatcgaagatctcatattctcgg 800

>emb|BX934130.2| Gallus gallus finished cDNA, clone ChEST267k10
          Length = 1947

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  gttcttcaggtcatccactt 406
            ||||||||||||||||||||
Sbjct: 1258 gttcttcaggtcatccactt 1277

>gb|AC108022.3| Homo sapiens BAC clone RP11-9D8 from 4, complete sequence
          Length = 162609

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    tcaggtgcatataacactga 68
             ||||||||||||||||||||
Sbjct: 18559 tcaggtgcatataacactga 18578

>dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 11/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tgctgctactggatgcttga 289
             ||||||||||||||||||||
Sbjct: 14249 tgctgctactggatgcttga 14268

>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete
             sequence
          Length = 192328

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tgctgctactggatgcttga 289
             ||||||||||||||||||||
Sbjct: 50412 tgctgctactggatgcttga 50431

>emb|BX571671.3| Zebrafish DNA sequence from clone DKEY-153O22 in linkage group 20,
             complete sequence
          Length = 86323

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   cttcaggtcatccactttaa 409
             ||||||||||||||||||||
Sbjct: 16672 cttcaggtcatccactttaa 16691

>ref|NM_209992.1| Eremothecium gossypii AEL222Cp (AEL222C), mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 gagctggagaagaagggcct 356
           ||||||||||||||||||||
Sbjct: 46  gagctggagaagaagggcct 65

>emb|BX322618.8| Zebrafish DNA sequence from clone CH211-265G21 in linkage group 20,
             complete sequence
          Length = 144211

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   cttcaggtcatccactttaa 409
             ||||||||||||||||||||
Sbjct: 71855 cttcaggtcatccactttaa 71836

>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    tgctgctactggatgcttga 289
              ||||||||||||||||||||
Sbjct: 179399 tgctgctactggatgcttga 179418

>gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromosome unknown, complete
              sequence
          Length = 228494

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     cacaattcaccaactcatag 38
              ||||||||||||||||||||
Sbjct: 112473 cacaattcaccaactcatag 112454

>dbj|AB056778.1| Macaca fascicularis brain cDNA clone:QccE-21094, full insert
           sequence
          Length = 1550

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 gaacaaagaggtagctgagg 254
           ||||||||||||||||||||
Sbjct: 727 gaacaaagaggtagctgagg 746

>dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T1588, complete sequence
          Length = 66129

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tgctgctactggatgcttga 289
             ||||||||||||||||||||
Sbjct: 58308 tgctgctactggatgcttga 58327

>dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 11/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tgctgctactggatgcttga 289
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244

>dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 11/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tgctgctactggatgcttga 289
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,371,205
Number of Sequences: 3902068
Number of extensions: 3371205
Number of successful extensions: 73727
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73631
Number of HSP's gapped (non-prelim): 95
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)