ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl04c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HAL5_YEAST (P38970) Serine/threonine-protein kinase HAL5 (EC 2.7... 30 2.4
2TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1) 30 3.1
3YHHN_CAEEL (Q94402) Hypothetical protein ZK265.6 28 9.1

>HAL5_YEAST (P38970) Serine/threonine-protein kinase HAL5 (EC 2.7.11.1)|
           (Halotolerence protein 5)
          Length = 855

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 14/65 (21%), Positives = 35/65 (53%)
 Frame = +3

Query: 186 NENQQTLHKKKGLEKTA*LFRRHENANKMRTSHVKSCATFEQQVAHDDGGHHGEERRGNV 365
           N+++  +HK+K +   + LF+ H++ N+ +          +QQ   ++G     E+  ++
Sbjct: 342 NDSEANMHKQKSVFSLSGLFKSHKDGNQQQQ---------QQQQQEENGEQINLEKAFSI 392

Query: 366 LPAER 380
           +P++R
Sbjct: 393 IPSQR 397



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>TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1)|
          Length = 1244

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = +1

Query: 112  HIQRRHSPG*IRWHGSSRRSSPAQETKTSRHYIKRKDSKKLLNYSADTKTP 264
            H+ R  SP       SSRRS   +  K S++ +K   S  L ++SA TKTP
Sbjct: 1184 HLGRSKSPPSHSGSSSSRRSCQQEHCKPSKNGLKGSGS--LHHHSASTKTP 1232



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>YHHN_CAEEL (Q94402) Hypothetical protein ZK265.6|
          Length = 189

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 10/44 (22%)
 Frame = +1

Query: 163 RRSSPAQETKTSRH-YIKRKDSKKLLNYSA---------DTKTP 264
           +R  PA   + +R  Y+K+KD+KK L+ SA         +TKTP
Sbjct: 7   KRGKPAYTNRRNRQKYLKKKDNKKKLSKSAVPIIKYTWDETKTP 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,511,958
Number of Sequences: 219361
Number of extensions: 1120699
Number of successful extensions: 3222
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3220
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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