ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl04c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CFA_ECOLI (P0A9H7) Cyclopropane-fatty-acyl-phospholipid synthase... 28 6.7
2CFA_ECOL6 (P0A9H8) Cyclopropane-fatty-acyl-phospholipid synthase... 28 6.7
3PA2G6_MOUSE (P97819) 85 kDa calcium-independent phospholipase A2... 28 8.8
4PA2G6_RAT (P97570) 85 kDa calcium-independent phospholipase A2 (... 28 8.8

>CFA_ECOLI (P0A9H7) Cyclopropane-fatty-acyl-phospholipid synthase (EC|
           2.1.1.79) (Cyclopropane fatty acid synthase) (CFA
           synthase)
          Length = 381

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 423 KFIRIWEYYLIFSAACMKARALGDYQVVFSR 331
           +F R++ YYL   A   +AR +  +QVVFSR
Sbjct: 341 RFKRMFTYYLNACAGAFRARDIQLWQVVFSR 371



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>CFA_ECOL6 (P0A9H8) Cyclopropane-fatty-acyl-phospholipid synthase (EC|
           2.1.1.79) (Cyclopropane fatty acid synthase) (CFA
           synthase)
          Length = 381

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 423 KFIRIWEYYLIFSAACMKARALGDYQVVFSR 331
           +F R++ YYL   A   +AR +  +QVVFSR
Sbjct: 341 RFKRMFTYYLNACAGAFRARDIQLWQVVFSR 371



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>PA2G6_MOUSE (P97819) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)|
           (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI
           PLA2)
          Length = 752

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 217 NHMVW*STFLFIEKGFRPCFNH 152
           NH  W  T L +E G R CF+H
Sbjct: 116 NHPSWTVTHLAVELGIRECFHH 137



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>PA2G6_RAT (P97570) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)|
           (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI
           PLA2)
          Length = 751

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 217 NHMVW*STFLFIEKGFRPCFNH 152
           NH  W  T L +E G R CF+H
Sbjct: 115 NHPSWTVTHLAVELGIRECFHH 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,663,228
Number of Sequences: 219361
Number of extensions: 1203592
Number of successful extensions: 2410
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2410
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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