>ABFA_BACSU (P94531) Alpha-N-arabinofuranosidase 1 (EC 3.2.1.55) (Arabinosidase|
           1)
          Length = 500

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +2

Query: 83  LSLTMDHHKERKKLQCLAIFCIMTTQLVPKKGKEWTWQPLIYHHIASRLVPR 238
           L +TM  H +R K+ CLA    +   ++ +KG E   QP+ Y ++ + +  R
Sbjct: 331 LLITMLQHADRVKIACLAQLVNVIAPIMTEKGGEAWRQPIFYPYMHASVYGR 382

>MY18A_MOUSE (Q9JMH9) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)|
            (Molecule associated with JAK3 N-terminus) (MAJN)
          Length = 2035

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 56   HCTTYRYQLLSLTMDHHKERKKLQCLAIFCIMTTQLVPKKGKEWTWQPL 202
            H T ++          H +++K+Q LAI C+       K  K+W W  L
Sbjct: 1187 HLTLFQAACRGYLARQHFKKRKIQDLAIRCVQKNIKKNKGVKDWPWWKL 1235

>PRIA_ECOLI (P17888) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 732

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +2

Query: 56  HCTTYRYQLLSLTMDHHKERKKLQCLAIFCIMTTQLVPKKGKEWTWQPLIYHHIASRL 229
           H   +  QL +L +      +KL  L         L PK+G  W WQ L+ H    RL
Sbjct: 648 HAPLFLQQLRNLILSSPLADEKLWVLG----PVPALAPKRGGRWRWQILLQHPSRVRL 701


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,294,663
Number of Sequences: 219361
Number of extensions: 1362349
Number of successful extensions: 3182
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3182
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)