Clone Name | rbastl04b11 |
---|---|
Clone Library Name | barley_pub |
>K125_ARATH (P82266) Probable 125 kDa kinesin-related protein| Length = 1056 Score = 36.6 bits (83), Expect = 0.034 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 13/99 (13%) Frame = -1 Query: 461 EKTLE------------ISGNANRSLGDDYKVDEPTCSTPRRRQVNIPSCQSIEGL-VTP 321 EKTLE I A + Y EPT +TP + + IP+ +IE L P Sbjct: 914 EKTLESFQQDQCCQARCIEDKAQETFQQQYMEYEPTGATPTKNEPEIPTKATIESLRAMP 973 Query: 320 LEDLVKSFRDSRTPSKLVAGNAKRLDLAIEMERVPLTTI 204 +E LV+ FR++ + K L R PL+ + Sbjct: 974 IETLVEEFRENNSYESFATKETKPQQLT----RSPLSQL 1008
>K125_TOBAC (O23826) 125 kDa kinesin-related protein| Length = 1006 Score = 32.7 bits (73), Expect = 0.49 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -1 Query: 467 HREKTLEISGNANRSLGDDYKVDEPTCSTPRRRQVNIPSCQSIEGL-VTPLEDLVKSFRD 291 H ++ I A + Y EPT +TP R + ++PS +IE L P+E L++ FR+ Sbjct: 920 HCMQSTSIEQIALETFQQKYMDYEPTGATPIRSEPDVPSKVTIESLRAMPMEVLLEEFRE 979 Query: 290 SRT 282 + + Sbjct: 980 NNS 982
>Y4BM_RHISN (P55380) Putative insertion sequence ATP-binding protein| y4bM/y4kI/y4tA Length = 263 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Frame = -2 Query: 379 QEGARLTSPAANRSRAW*LH-----WKTSSSHSGTAELRRNSWLG 260 +E LT+P ++ +A L W+ + SGT EL R+ WLG Sbjct: 2 KEARMLTNPTLDQMQALGLTGMAAAWRELTEQSGTNELSRDEWLG 46
>JHD1_CAEBR (Q60V67) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1063 Score = 29.3 bits (64), Expect = 5.4 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -1 Query: 383 TPRRRQVNIPSCQSIEGLVTPLEDLVKS 300 TPR ++ N+ + S+E +TPLEDLV S Sbjct: 78 TPRDQRKNLYNVLSLEYSLTPLEDLVNS 105
>CISY_CANTR (P79024) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)| Length = 467 Score = 28.9 bits (63), Expect = 7.1 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -3 Query: 396 TNLFNTKKAPG*HPQLPIDRGLGNSTGRPR 307 T LF +A G PQL +DRGLG RP+ Sbjct: 421 TVLFGVSRAFGVLPQLILDRGLGMPIERPK 450
>YCT3_SCHPO (O59813) Putative amino-acid permease C794.03| Length = 554 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 256 AFPATSFDGVLLSRNDLTRSSSGVTKPSIDWQLGMLTWRL 375 A+ A +F + LSRND +S + K S +QL W L Sbjct: 431 AYAAVAFGRLFLSRNDFPKSEWSLGKLSKPFQLITFLWNL 470 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,821,043 Number of Sequences: 219361 Number of extensions: 1436264 Number of successful extensions: 3720 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3647 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3719 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)