>gb|AY109072.1| Zea mays PCO086346 mRNA sequence
          Length = 583

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 370 cgccttcttggtgttgaacaagttggttcatccaccttgtagtcatcccccagtgatctg 429
           |||||||| |||||||||||||||| |||||||||||| || || || ||||| || || 
Sbjct: 294 cgccttctcggtgttgaacaagttgcttcatccaccttataatcttctcccagagaccta 235

                        
Query: 430 ttggcattccctg 442
           | |||||||||||
Sbjct: 234 tcggcattccctg 222

>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence
          Length = 124972

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 377    ttggtgttgaacaagttggttcatccacct 406
              ||||||||||||||| ||||||||| ||||
Sbjct: 124709 ttggtgttgaacaagatggttcatcaacct 124738

>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence
          Length = 127295

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 377  ttggtgttgaacaagttggttcatccacct 406
            ||||||||||||||| ||||||||| ||||
Sbjct: 1771 ttggtgttgaacaagatggttcatcaacct 1742

>gb|AC149490.2| Medicago truncatula chromosome 2 BAC clone mth2-29n15, complete
            sequence
          Length = 53286

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 377  ttggtgttgaacaagttggttcatccacct 406
            ||||||||||||||| ||||||||| ||||
Sbjct: 9279 ttggtgttgaacaagatggttcatcaacct 9308

>gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, complete sequence
          Length = 171004

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 346    tggcagctggggatgttaacc 366
              |||||||||||||||||||||
Sbjct: 102316 tggcagctggggatgttaacc 102296

>emb|AL355975.10| Human DNA sequence from clone RP11-468C2 on chromosome 9, complete
             sequence
          Length = 131705

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    atattacatttcttgcatata 33
             |||||||||||||||||||||
Sbjct: 86130 atattacatttcttgcatata 86110

>gb|DQ248949.1| Taihangia rupestris TrSHP MADS-box protein mRNA, complete cds
          Length = 958

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 135 atcttcaaactacagagtcaa 155
           |||||||||||||||||||||
Sbjct: 777 atcttcaaactacagagtcaa 757

>ref|NM_001018853.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPAP27G11.15), partial mRNA
          Length = 816

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 216 aggaactctctccatctcaat 236
           |||||||||||||||||||||
Sbjct: 722 aggaactctctccatctcaat 702

>emb|AL157917.1|SPAP27G11 S.pombe chromosome I P1 p27G11
          Length = 29285

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   aggaactctctccatctcaat 236
             |||||||||||||||||||||
Sbjct: 29114 aggaactctctccatctcaat 29094

>gb|DQ234767.1| Streptococcus gordonii alpha-phosphoglucomutase (pgm) gene, complete
            cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   agtcttctacgacagagata 52
            ||||||||||||||||||||
Sbjct: 1671 agtcttctacgacagagata 1652

>gb|AC123703.8| Mus musculus chromosome 3, clone RP23-345N18, complete sequence
          Length = 197442

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   ctgtgtctagttaattgtag 211
             ||||||||||||||||||||
Sbjct: 55915 ctgtgtctagttaattgtag 55934

>gb|U39678.2| Caenorhabditis elegans cosmid C39D10, complete sequence
          Length = 40898

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   ttcatccaccttgtagtcat 415
             ||||||||||||||||||||
Sbjct: 27010 ttcatccaccttgtagtcat 27029

>gb|AC123877.5| Mus musculus BAC clone RP23-297J18 from chromosome 5, complete sequence
          Length = 183152

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ataaatgctcaacattacat 69
             ||||||||||||||||||||
Sbjct: 77920 ataaatgctcaacattacat 77901

>gb|AC125542.4| Mus musculus BAC clone RP23-321C24 from chromosome 5, complete sequence
          Length = 194326

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    ataaatgctcaacattacat 69
             ||||||||||||||||||||
Sbjct: 90667 ataaatgctcaacattacat 90686

>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence
          Length = 270111

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     tattacatttcttgcatata 33
              ||||||||||||||||||||
Sbjct: 166461 tattacatttcttgcatata 166442

>emb|AL353618.11| Human DNA sequence from clone RP11-550K21 on chromosome 6, complete
            sequence
          Length = 32451

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  aactagctcaggccataatg 122
            ||||||||||||||||||||
Sbjct: 8317 aactagctcaggccataatg 8336

>emb|AL160006.16| Human DNA sequence from clone RP4-773N10 on chromosome 1p13.1-13.3
             Contains the 3' end of gene KIAA1761 (FLJ14743) and the
             ALX3 gene for aristaless-like homeobox 3, complete
             sequence
          Length = 91783

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   ggccataatgcctccaaggt 132
             ||||||||||||||||||||
Sbjct: 18474 ggccataatgcctccaaggt 18455

>emb|AL117338.15|HSA490O24 Human DNA sequence from clone RP11-490O24 on chromosome 10 Contains a
             60S ribosomal protein L23 (RPL23) pseudogene and a novel
             gene, complete sequence
          Length = 168778

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   ttcatccaccttgtagtcat 415
             ||||||||||||||||||||
Sbjct: 62682 ttcatccaccttgtagtcat 62701

>gb|AC158795.4| Mus musculus chromosome 3, clone RP23-261G9, complete sequence
          Length = 155916

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    ctgtgtctagttaattgtag 211
              ||||||||||||||||||||
Sbjct: 109619 ctgtgtctagttaattgtag 109638

>emb|BX663610.8| Zebrafish DNA sequence from clone DKEYP-114A6 in linkage group 3,
             complete sequence
          Length = 120560

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   agtgatctgttggcattccc 440
             ||||||||||||||||||||
Sbjct: 21409 agtgatctgttggcattccc 21390

>gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 62     cattacatttcttgcatatagtct 85
              |||||||| |||||||||||||||
Sbjct: 108224 cattacatctcttgcatatagtct 108247

>gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complete sequence
          Length = 193015

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tgctcaacattacatttctt 74
             ||||||||||||||||||||
Sbjct: 87933 tgctcaacattacatttctt 87914

>emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 in linkage group 19,
            complete sequence
          Length = 151598

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 6    catagtaatattacatttcttgcatata 33
            |||||||| | |||||||||||||||||
Sbjct: 3806 catagtaaaaatacatttcttgcatata 3833

>dbj|AP003973.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-89C3, complete
              sequence
          Length = 189099

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    tctctccatctcaattgcca 241
              ||||||||||||||||||||
Sbjct: 117222 tctctccatctcaattgcca 117241

>gb|AC110375.4| Mus musculus BAC clone RP23-409L20 from 18, complete sequence
          Length = 191505

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tattacatttcttgcatata 33
             ||||||||||||||||||||
Sbjct: 35998 tattacatttcttgcatata 35979


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,736,705
Number of Sequences: 3902068
Number of extensions: 3736705
Number of successful extensions: 63922
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63878
Number of HSP's gapped (non-prelim): 44
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)