ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl04b10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3605 Score = 759 bits (383), Expect = 0.0 Identities = 436/449 (97%), Gaps = 5/449 (1%) Strand = Plus / Minus Query: 21 aaggacgggaataatttatataaataataaatacaagaattcataggtccattcctacga 80 ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| Sbjct: 3605 aaggacgggaataatttatataa-taataa-taca-gaattcataggtccattcctacg- 3550 Query: 81 tacaaagtgcctcataggaaaattcctataggtttacaatccaatgagattcctttgttc 140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3549 tacaaagtgcctcataggaaaattcctataggtttacaatccaatgagattcctttgttc 3490 Query: 141 cnnnnnnngagcttaacctcatgaaaacggtagatggtctattacatctatttacaaatg 200 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3489 caaaaaa-gagcttaacctcatgaaaacggtagatggtctattacatctatttacaaatg 3431 Query: 201 tgttttcgcaattttgacaactttctcaaacgtagtaattcgcaactccaaacataaatt 260 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 3430 tgttttcgcaattttgacaactttctcaaacgtagtaattcgcaaccccaaacataaatt 3371 Query: 261 ttctctggctccacgggttgtcagtcgatcactgttatattttctgtctctacaatctcc 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3370 ttctctggctccacgggttgtcagtcgatcactgttatattttctgtctctacaatctcc 3311 Query: 321 cattttcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtga 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3310 cattttcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtga 3251 Query: 381 atggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacga 440 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3250 atggatcaacacaaacccacagcaaggagaagattgaagccaggaggacagcccagacga 3191 Query: 441 tgacaatcgtcggtgtgcggttttgcctg 469 ||||||||||||||||||||||||||||| Sbjct: 3190 tgacaatcgtcggtgtgcggttttgcctg 3162
>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete cds Length = 3681 Score = 714 bits (360), Expect = 0.0 Identities = 429/453 (94%), Gaps = 1/453 (0%) Strand = Plus / Minus Query: 17 tgtgaaggacgggaataatttatataaataataaatacaagaattcataggtccattcct 76 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3638 tgtgaaggacaggaataatttatataaataataaatacaagaattcataggtccattcct 3579 Query: 77 acgatacaaagtgcctcataggaaaattcctataggtttacaatccaatgagattccttt 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3578 acgatacaaagtgcctcataggaaaattcctataggtttacaatccaatgagattccttt 3519 Query: 137 gttccnnnnnnngagcttaacctcatgaaaacggtagatggtctattacatctatttaca 196 ||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3518 gttccaaaaaaagatcttaacctcatgaaaacggtagatggtctattacatctatttaca 3459 Query: 197 aatgtgttttcgcaattttgacaactttctcaaacgtagtaattcgcaactccaaacata 256 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||| Sbjct: 3458 aatgtgttttctcaattttgacaactttctcaaacatagtaattcgcaaccccag-cata 3400 Query: 257 aattttctctggctccacgggttgtcagtcgatcactgttatattttctgtctctacaat 316 ||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| Sbjct: 3399 aatattctctggctccacaggtggtcgctcgatcactgttatattttctgtctctacaaa 3340 Query: 317 ctcccattttcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgta 376 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3339 ctcccactttcctagcagttgatgccacaggtttggatatttgggccagcgagacgggta 3280 Query: 377 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 436 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 3279 gtgaatggatcaacacgaacccacagcaaggagaagatagaagcgaggaggacagcccag 3220 Query: 437 acgatgacaatcgtcggtgtgcggttttgcctg 469 ||||||||||||||||||||||||||||||||| Sbjct: 3219 acgatgacaatcgtcggtgtgcggttttgcctg 3187
>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA sequence Length = 3626 Score = 670 bits (338), Expect = 0.0 Identities = 437/470 (92%), Gaps = 8/470 (1%) Strand = Plus / Minus Query: 3 aaactcctccaaaatgtgaaggacgggaataatttatataaataataaatacaagaattc 62 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 3625 aaactcctccaaaatgtgaaggacaggaataatttatataaataataaatacaacatttc 3566 Query: 63 ataggtccattcctacgatacaaagtgcctcataggaaaattcctataggtttacaatcc 122 |||||||||||||||| || ||||||||||||||||||||||||||||||||||| | Sbjct: 3565 ataggtccattcctacaatccaaagtgcctcataggaaaattcctataggtttac----c 3510 Query: 123 aatgagattcctttgttccnnnnnnnga---gcttaacctcatgaaaacggtagatggtc 179 ||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 3509 aatgagattcctttgttccaaaaaaagaagagcttaacctcatgaaaacggtagatggtc 3450 Query: 180 tattacatctatttacaaatgtgttttcgcaattttgacaactttctcaaacgtagtaat 239 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3449 tattacatctatttacaaatgtgttttctcaattttgacaactttctcaaacgtagtaat 3390 Query: 240 tcgcaactccaaacataaattttctctggctccacgggttgtcagtcgatcactgttata 299 || |||| |||| ||||||| |||||||||||| |||||||| ||||||||||||||| Sbjct: 3389 tcacaaccccaa-cataaatattctctggctccgcgggttgttgctcgatcactgttata 3331 Query: 300 ttttctgtctctacaatctcccattttcctagcagttgatgccacaggtttggatatttg 359 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3330 ttttctgtctctacaaactcccactttcctagcagttgatgccacaggtttggatatttg 3271 Query: 360 ggccagcgagacgtgtagtgaatggatcaacacgaacccacagcaaggagaagattgaag 419 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3270 ggccagcgagacgggtagtgaatggatcaacacgaacccacagcaaggagaagatagaag 3211 Query: 420 ccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgcctg 469 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3210 cgaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgcctg 3161
>gb|BT009583.1| Triticum aestivum clone wre1n.pk0043.h8:fis, full insert mRNA sequence Length = 993 Score = 509 bits (257), Expect = e-141 Identities = 306/321 (95%), Gaps = 1/321 (0%) Strand = Plus / Minus Query: 149 gagcttaacctcatgaaaacggtagatggtctattacatctatttacaaatgtgttttcg 208 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 959 gagcttaacctcatgaaaacggtagatagtctattacatctatttacaaatgtgttttct 900 Query: 209 caattttgacaactttctcaaacgtagtaattcgcaactccaaacataaattttctctgg 268 ||||||||||||||||||||||||||||||||| |||| |||| ||||||| |||||||| Sbjct: 899 caattttgacaactttctcaaacgtagtaattcacaaccccaa-cataaatattctctgg 841 Query: 269 ctccacgggttgtcagtcgatcactgttatattttctgtctctacaatctcccattttcc 328 |||||| ||| ||| ||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 840 ctccacaggtggtcgctcgatcactgttatattttctgtctctacaaactcccactttcc 781 Query: 329 tagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggatca 388 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 780 tagcagttgatgccacaggtttggatatttgggccagcgagacgggtagtgaatggatca 721 Query: 389 acacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatc 448 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 720 acacgaacccacagcaaggagaagatagaagcgaggaggacagcccagacgatgacaatc 661 Query: 449 gtcggtgtgcggttttgcctg 469 ||||||||||||||||||||| Sbjct: 660 gtcggtgtgcggttttgcctg 640
>gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA, complete cds Length = 3613 Score = 129 bits (65), Expect = 9e-27 Identities = 122/141 (86%) Strand = Plus / Minus Query: 327 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 386 ||||||||||||||||||| ||||| ||| |||||||| || || || |||||||||| Sbjct: 3452 cctagcagttgatgccacacttttgggtatctgggccagtgacccgggtggtgaatggat 3393 Query: 387 caacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaa 446 ||| |||||||||||||||||||||||| || || ||||||| |||||||||| |||| Sbjct: 3392 caatacgaacccacagcaaggagaagatagatgcaaggaggatggcccagacgacaacaa 3333 Query: 447 tcgtcggtgtgcggttttgcc 467 | |||||||||||||| |||| Sbjct: 3332 tggtcggtgtgcggttctgcc 3312
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 324 tttcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatg 383 |||||||||| ||||||||||| |||||| ||| |||||||| || || || ||||| | Sbjct: 3208 tttcctagcaattgatgccacatgtttgggtatctgggccagtgacgcgggtggtgaacg 3149 Query: 384 gatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatga 443 |||||| ||||||||||||||||||||||| ||||| ||||||| |||||||| | | Sbjct: 3148 gatcaatgcgaacccacagcaaggagaagatcgaagcaaggaggattgcccagacaacaa 3089 Query: 444 caatcgtcggtgtgcggttttgcct 468 |||| ||||| |||||||||||||| Sbjct: 3088 caatggtcggcgtgcggttttgcct 3064
>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds Length = 3756 Score = 119 bits (60), Expect = 9e-24 Identities = 141/168 (83%) Strand = Plus / Minus Query: 301 tttctgtctctacaatctcccattttcctagcagttgatgccacaggtttggatatttgg 360 ||||| ||||||||||| ||| |||||||||||||||||||||| |||||| ||| ||| Sbjct: 3509 tttctttctctacaatcacccgctttcctagcagttgatgccacatgtttgggtatctgg 3450 Query: 361 gccagcgagacgtgtagtgaatggatcaacacgaacccacagcaaggagaagattgaagc 420 ||||| || || || ||||| || |||| |||||||||| |||||||||||| || || Sbjct: 3449 gccagtgacgcgggtggtgaacgggtcaatgcgaacccacaacaaggagaagatggaggc 3390 Query: 421 caggaggacagcccagacgatgacaatcgtcggtgtgcggttttgcct 468 ||||| | |||||||||| ||||| || ||||||||||||||||| Sbjct: 3389 aaggagaattgcccagacgacaacaatggttggtgtgcggttttgcct 3342
>ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3954 Score = 109 bits (55), Expect = 8e-21 Identities = 139/167 (83%) Strand = Plus / Minus Query: 301 tttctgtctctacaatctcccattttcctagcagttgatgccacaggtttggatatttgg 360 ||||||||||||||||| || |||| ||||||||||||||||| |||||| ||| ||| Sbjct: 3709 tttctgtctctacaatcccctgctttcttagcagttgatgccacatgtttgggtatctgg 3650 Query: 361 gccagcgagacgtgtagtgaatggatcaacacgaacccacagcaaggagaagattgaagc 420 ||| | || ||| || ||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 3649 gccggtgacacgggtggtgaatggatcgatgcgaacccacagcaatgagaagatcgaagc 3590 Query: 421 caggaggacagcccagacgatgacaatcgtcggtgtgcggttttgcc 467 ||| |||| ||||| || | || || ||||| ||||||||||||| Sbjct: 3589 cagaaggattgcccaaacaacaacgatggtcggagtgcggttttgcc 3543
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 109 bits (55), Expect = 8e-21 Identities = 139/167 (83%) Strand = Plus / Plus Query: 301 tttctgtctctacaatctcccattttcctagcagttgatgccacaggtttggatatttgg 360 ||||||||||||||||| || |||| ||||||||||||||||| |||||| ||| ||| Sbjct: 5885180 tttctgtctctacaatcccctgctttcttagcagttgatgccacatgtttgggtatctgg 5885239 Query: 361 gccagcgagacgtgtagtgaatggatcaacacgaacccacagcaaggagaagattgaagc 420 ||| | || ||| || ||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 5885240 gccggtgacacgggtggtgaatggatcgatgcgaacccacagcaatgagaagatcgaagc 5885299 Query: 421 caggaggacagcccagacgatgacaatcgtcggtgtgcggttttgcc 467 ||| |||| ||||| || | || || ||||| ||||||||||||| Sbjct: 5885300 cagaaggattgcccaaacaacaacgatggtcggagtgcggttttgcc 5885346 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | ||||||||| |||||||| ||||| | ||||||| Sbjct: 8533313 gagaagattgaagccagtagaatggaccagacgataacaatcgttggtgtcctgttttgc 8533254 Query: 467 ct 468 || Sbjct: 8533253 ct 8533252
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 109 bits (55), Expect = 8e-21 Identities = 139/167 (83%) Strand = Plus / Plus Query: 301 tttctgtctctacaatctcccattttcctagcagttgatgccacaggtttggatatttgg 360 ||||||||||||||||| || |||| ||||||||||||||||| |||||| ||| ||| Sbjct: 27628 tttctgtctctacaatcccctgctttcttagcagttgatgccacatgtttgggtatctgg 27687 Query: 361 gccagcgagacgtgtagtgaatggatcaacacgaacccacagcaaggagaagattgaagc 420 ||| | || ||| || ||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 27688 gccggtgacacgggtggtgaatggatcgatgcgaacccacagcaatgagaagatcgaagc 27747 Query: 421 caggaggacagcccagacgatgacaatcgtcggtgtgcggttttgcc 467 ||| |||| ||||| || | || || ||||| ||||||||||||| Sbjct: 27748 cagaaggattgcccaaacaacaacgatggtcggagtgcggttttgcc 27794
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 109 bits (55), Expect = 8e-21 Identities = 139/167 (83%) Strand = Plus / Plus Query: 301 tttctgtctctacaatctcccattttcctagcagttgatgccacaggtttggatatttgg 360 ||||||||||||||||| || |||| ||||||||||||||||| |||||| ||| ||| Sbjct: 59854 tttctgtctctacaatcccctgctttcttagcagttgatgccacatgtttgggtatctgg 59913 Query: 361 gccagcgagacgtgtagtgaatggatcaacacgaacccacagcaaggagaagattgaagc 420 ||| | || ||| || ||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 59914 gccggtgacacgggtggtgaatggatcgatgcgaacccacagcaatgagaagatcgaagc 59973 Query: 421 caggaggacagcccagacgatgacaatcgtcggtgtgcggttttgcc 467 ||| |||| ||||| || | || || ||||| ||||||||||||| Sbjct: 59974 cagaaggattgcccaaacaacaacgatggtcggagtgcggttttgcc 60020
>dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059I02, full insert sequence Length = 3954 Score = 109 bits (55), Expect = 8e-21 Identities = 139/167 (83%) Strand = Plus / Minus Query: 301 tttctgtctctacaatctcccattttcctagcagttgatgccacaggtttggatatttgg 360 ||||||||||||||||| || |||| ||||||||||||||||| |||||| ||| ||| Sbjct: 3709 tttctgtctctacaatcccctgctttcttagcagttgatgccacatgtttgggtatctgg 3650 Query: 361 gccagcgagacgtgtagtgaatggatcaacacgaacccacagcaaggagaagattgaagc 420 ||| | || ||| || ||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 3649 gccggtgacacgggtggtgaatggatcgatgcgaacccacagcaatgagaagatcgaagc 3590 Query: 421 caggaggacagcccagacgatgacaatcgtcggtgtgcggttttgcc 467 ||| |||| ||||| || | || || ||||| ||||||||||||| Sbjct: 3589 cagaaggattgcccaaacaacaacgatggtcggagtgcggttttgcc 3543
>dbj|AK062007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E01, full insert sequence Length = 1241 Score = 109 bits (55), Expect = 8e-21 Identities = 139/167 (83%) Strand = Plus / Minus Query: 301 tttctgtctctacaatctcccattttcctagcagttgatgccacaggtttggatatttgg 360 ||||||||||||||||| || |||| ||||||||||||||||| |||||| ||| ||| Sbjct: 996 tttctgtctctacaatcccctgctttcttagcagttgatgccacatgtttgggtatctgg 937 Query: 361 gccagcgagacgtgtagtgaatggatcaacacgaacccacagcaaggagaagattgaagc 420 ||| | || ||| || ||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 936 gccggtgacacgggtggtgaatggatcgatgcgaacccacagcaatgagaagatcgaagc 877 Query: 421 caggaggacagcccagacgatgacaatcgtcggtgtgcggttttgcc 467 ||| |||| ||||| || | || || ||||| ||||||||||||| Sbjct: 876 cagaaggattgcccaaacaacaacgatggtcggagtgcggttttgcc 830
>gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 85.7 bits (43), Expect = 1e-13 Identities = 118/143 (82%) Strand = Plus / Minus Query: 327 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 386 ||||||||||||||||||| || ||| ||| ||||||| || || || ||||| || | Sbjct: 3554 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 3495 Query: 387 caacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaa 446 | | ||||||||||||||||||||||| || ||||| |||| |||||||||| ||| | Sbjct: 3494 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 3435 Query: 447 tcgtcggtgtgcggttttgcctg 469 | ||||| |||||||| |||||| Sbjct: 3434 tggtcggggtgcggttctgcctg 3412
>gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 85.7 bits (43), Expect = 1e-13 Identities = 118/143 (82%) Strand = Plus / Minus Query: 327 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 386 ||||||||||||||||||| || ||| ||| ||||||| || || || ||||| || | Sbjct: 3572 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 3513 Query: 387 caacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaa 446 | | ||||||||||||||||||||||| || ||||| |||| |||||||||| ||| | Sbjct: 3512 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 3453 Query: 447 tcgtcggtgtgcggttttgcctg 469 | ||||| |||||||| |||||| Sbjct: 3452 tggtcggggtgcggttctgcctg 3430
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 326 tcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatgga 385 |||||||||||||| ||||| ||||| ||| ||||| | || ||| || ||||||||| Sbjct: 33476873 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 33476932 Query: 386 tcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgaca 445 || | |||||||||||||||||||||||| || || ||||||| ||||| || | ||| Sbjct: 33476933 tcgatacgaacccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaaca 33476992 Query: 446 atcgtcggtgtgcggttttgcc 467 || |||||||| ||||| |||| Sbjct: 33476993 atggtcggtgtacggttctgcc 33477014 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | |||||| |||||||| || ||||| | ||||||| Sbjct: 34878720 gagaagattgaagccagcagaatggaccagacaatgacaattgttggtgtcctgttttgc 34878661 Query: 467 ct 468 || Sbjct: 34878660 ct 34878659
>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence, complete sequence Length = 41693 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 326 tcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatgga 385 |||||||||||||| ||||| ||||| ||| ||||| | || ||| || ||||||||| Sbjct: 6100 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 6159 Query: 386 tcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgaca 445 || | |||||||||||||||||||||||| || || ||||||| ||||| || | ||| Sbjct: 6160 tcgatacgaacccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaaca 6219 Query: 446 atcgtcggtgtgcggttttgcc 467 || |||||||| ||||| |||| Sbjct: 6220 atggtcggtgtacggttctgcc 6241
>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3) mRNA, partial cds Length = 3362 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Minus Query: 326 tcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatgga 385 |||||||||||||||||||| ||||||||| ||| |||| || ||||| ||||| || Sbjct: 3158 tcctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacggg 3099 Query: 386 tcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgaca 445 || | ||||||||||||||||||||||| || || || |||| |||||||||| || Sbjct: 3098 tcgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacg 3039 Query: 446 atcgtcggtgtgcggttttgcc 467 || ||||| |||||||| |||| Sbjct: 3038 atggtcggcgtgcggttctgcc 3017
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Minus Query: 326 tcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatgga 385 |||||||||||||| ||||| ||||| ||| ||||| | || ||| || ||||||||| Sbjct: 21238 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 21179 Query: 386 tcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgaca 445 || | |||||||||||||||||||||||| || || ||||||| ||||| || | ||| Sbjct: 21178 tcgatacgaacccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaaca 21119 Query: 446 atcgtcggtgtgcggttttgcc 467 || |||||||| ||||| |||| Sbjct: 21118 atggtcggtgtacggttctgcc 21097
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 326 tcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatgga 385 |||||||||||||| ||||| ||||| ||| ||||| | || ||| || ||||||||| Sbjct: 33567383 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 33567442 Query: 386 tcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgaca 445 || | |||||||||||||||||||||||| || || ||||||| ||||| || | ||| Sbjct: 33567443 tcgatacgaacccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaaca 33567502 Query: 446 atcgtcggtgtgcggttttgcc 467 || |||||||| ||||| |||| Sbjct: 33567503 atggtcggtgtacggttctgcc 33567524 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | |||||| |||||||| || ||||| | ||||||| Sbjct: 34968792 gagaagattgaagccagcagaatggaccagacaatgacaattgttggtgtcctgttttgc 34968733 Query: 467 ct 468 || Sbjct: 34968732 ct 34968731
>dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003G18, full insert sequence Length = 4282 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Minus Query: 326 tcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatgga 385 |||||||||||||| ||||| ||||| ||| ||||| | || ||| || ||||||||| Sbjct: 3498 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 3439 Query: 386 tcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgaca 445 || | |||||||||||||||||||||||| || || ||||||| ||||| || | ||| Sbjct: 3438 tcgatacgaacccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaaca 3379 Query: 446 atcgtcggtgtgcggttttgcc 467 || |||||||| ||||| |||| Sbjct: 3378 atggtcggtgtacggttctgcc 3357
>dbj|AK061688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B05, full insert sequence Length = 1582 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Minus Query: 326 tcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatgga 385 |||||||||||||| ||||| ||||| ||| ||||| | || ||| || ||||||||| Sbjct: 1163 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 1104 Query: 386 tcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgaca 445 || | |||||||||||||||||||||||| || || ||||||| ||||| || | ||| Sbjct: 1103 tcgatacgaacccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaaca 1044 Query: 446 atcgtcggtgtgcggttttgcc 467 || |||||||| ||||| |||| Sbjct: 1043 atggtcggtgtacggttctgcc 1022
>ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3607 Score = 79.8 bits (40), Expect = 7e-12 Identities = 115/140 (82%) Strand = Plus / Minus Query: 328 ctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggatc 387 |||||||||||| ||||| ||||| ||| ||||| | || ||| || ||||||||||| Sbjct: 3607 ctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatggatc 3548 Query: 388 aacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaat 447 | |||||||||||||||||||||||| || || ||||||| ||||| || | ||||| Sbjct: 3547 gatacgaacccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaat 3488 Query: 448 cgtcggtgtgcggttttgcc 467 |||||||| ||||| |||| Sbjct: 3487 ggtcggtgtacggttctgcc 3468
>gb|BT019277.1| Zea mays clone Contig950.F mRNA sequence Length = 789 Score = 73.8 bits (37), Expect = 5e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 326 tcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatgga 385 |||||||||||||||||||| | ||||| ||||||| || || || ||||||||| Sbjct: 192 tcctagcagttgatgccacatttcgcgatatcagggccagtgacccgggtggtgaatgga 251 Query: 386 tcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgaca 445 || | ||||||||||| || ||| ||||| || || ||||||| ||||||||| | |||| Sbjct: 252 tcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgaca 311 Query: 446 atcgtcggtgtgcggtt 462 || ||||| |||||||| Sbjct: 312 atggtcggcgtgcggtt 328
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 73.8 bits (37), Expect = 5e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 326 tcctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatgga 385 |||||||||||||||||||| | ||||| ||||||| || || || ||||||||| Sbjct: 3486 tcctagcagttgatgccacatttcgcgatatcagggccagtgacccgggtggtgaatgga 3427 Query: 386 tcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgaca 445 || | ||||||||||| || ||| ||||| || || ||||||| ||||||||| | |||| Sbjct: 3426 tcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgaca 3367 Query: 446 atcgtcggtgtgcggtt 462 || ||||| |||||||| Sbjct: 3366 atggtcggcgtgcggtt 3350
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 377 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 436 ||||||||||| | ||||||||||| || ||| ||||| || || ||||||| ||||||| Sbjct: 3435 gtgaatggatcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccag 3376 Query: 437 acgatgacaatcgtcggtgtgcggtt 462 || | |||||| ||||| |||||||| Sbjct: 3375 acaacgacaatggtcggcgtgcggtt 3350
>gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA, complete cds Length = 3648 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 ||||||||||| |||||||| ||||| ||||||| | ||| || |||||||| |||||| Sbjct: 3255 acccacagcaacgagaagatggaagcaaggaggatggaccaaacaatgacaattgtcggt 3196 Query: 455 gtgcggtt 462 |||||||| Sbjct: 3195 gtgcggtt 3188
>gb|BT018125.1| Zea mays clone EL01N0554C08.c mRNA sequence Length = 1450 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 327 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 386 ||||||||||||||||||| ||| | ||| ||||||| || || || ||||| |||| Sbjct: 1263 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggat 1204 Query: 387 caacacgaacccacagcaaggagaagattgaagccaggagga 428 | | ||||||||||||||||||||||| || ||||| |||| Sbjct: 1203 cgatgcgaacccacagcaaggagaagatcgacgccagcagga 1162
>gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 (CesA-7) mRNA, complete cds Length = 3968 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | |||||||||||||||||| ||||| | ||||||| Sbjct: 3321 gagaagattgaagccagcagaatggaccagacgatgacaatcgttggtgtcctgttttgc 3262 Query: 467 ct 468 || Sbjct: 3261 ct 3260
>gb|AY103655.1| Zea mays PCO096398 mRNA sequence Length = 3897 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | |||||||||||||||||| ||||| | ||||||| Sbjct: 3334 gagaagattgaagccagcagaatggaccagacgatgacaatcgttggtgtcctgttttgc 3275 Query: 467 ct 468 || Sbjct: 3274 ct 3273
>gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds Length = 3795 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Minus Query: 327 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 386 ||||||||||||||||||| ||| | ||| ||||||| || || | ||||| |||| Sbjct: 3478 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcggttggtgaacggat 3419 Query: 387 caacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaa 446 | | ||||||||||||||||||||||| || ||||| |||| |||||||| | || | Sbjct: 3418 cgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacga 3359 Query: 447 tcgtcggtgtgcggttttgcc 467 | ||||| |||||||| |||| Sbjct: 3358 tggtcggggtgcggttctgcc 3338
>gb|AY112236.1| Zea mays CL1160_1 mRNA sequence Length = 3728 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Minus Query: 327 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 386 ||||||||||||||||||| ||| | ||| ||||||| || || | ||||| |||| Sbjct: 3478 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcggttggtgaacggat 3419 Query: 387 caacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaa 446 | | ||||||||||||||||||||||| || ||||| |||| |||||||| | || | Sbjct: 3418 cgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacga 3359 Query: 447 tcgtcggtgtgcggttttgcc 467 | ||||| |||||||| |||| Sbjct: 3358 tggtcggggtgcggttctgcc 3338
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 128361 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 128420 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 128421 gtgcggttctgcctg 128435
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 17204 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 17263 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 17264 gtgcggttctgcctg 17278
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds Length = 3277 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 380 aatggatcaacacgaacccacagcaaggagaagattgaagccaggag 426 |||||||||| || ||||| |||||||||||||| ||||||||||| Sbjct: 3067 aatggatcaatccggacccaaagcaaggagaagatggaagccaggag 3021
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 4506737 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 4506796 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 4506797 gtgcggttctgcctg 4506811
>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds Length = 3453 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||||| |||||||||||| || ||||||| | ||| || |||||||| || || Sbjct: 3340 acccacagcagggagaagattgacgcgaggaggatggaccaaacaatgacaatggttggc 3281 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 3280 gtgcggttctgcctg 3266
>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||||||||||||||| || || ||||||| | ||| |||||||| || || || Sbjct: 3333 acccacagcaaggagaagatagacgcaaggaggatggaccaaacgatgacgattgttggc 3274 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 3273 gtgcggttctgcctg 3259
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 3347 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 3288 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 3287 gtgcggttctgcctg 3273
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 3347 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 3288 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 3287 gtgcggttctgcctg 3273
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 3347 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 3288 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 3287 gtgcggttctgcctg 3273
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 3347 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 3288 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 3287 gtgcggttctgcctg 3273
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 3347 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 3288 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 3287 gtgcggttctgcctg 3273
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 3347 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 3288 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 3287 gtgcggttctgcctg 3273
>dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D02, full insert sequence Length = 1426 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 1024 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 965 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 964 gtgcggttctgcctg 950
>dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C08, full insert sequence Length = 1097 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||| | ||||||||| || || ||||||| | |||||||||||| || ||||| Sbjct: 598 acccacagaagggagaagatcgacgcgaggaggatcgaccagacgatgacgatggtcgga 539 Query: 455 gtgcggttttgcctg 469 |||||||| |||||| Sbjct: 538 gtgcggttctgcctg 524
>ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3746 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | ||||||||| |||||||| ||||| | ||||||| Sbjct: 3262 gagaagattgaagccagtagaatggaccagacgataacaatcgttggtgtcctgttttgc 3203 Query: 467 ct 468 || Sbjct: 3202 ct 3201
>gb|AY389728.1| Hyacinthus orientalis cellulose synthase protein mRNA, partial cds Length = 782 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 ||||||| ||| |||||||| ||||||||||||| | |||||| | ||||| ||||| Sbjct: 651 acccacaacaaagagaagatggaagccaggaggatcgaccagacaaccacaatggtcgga 592 Query: 455 gtgcggttttgcct 468 |||||||| ||||| Sbjct: 591 gtgcggttctgcct 578
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 94 ataggaaaattcctataggtttacaatccaatgagattcctt 135 ||||||||||||||||||| || |||||| |||| ||||||| Sbjct: 1133198 ataggaaaattcctataggatttcaatcctatgaaattcctt 1133157
>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||||||||||||||| || || || |||| | |||||| ||||| || || ||| Sbjct: 3340 acccacagcaaggagaagatagatgcaagaaggatggaccagacaatgacgattgttggt 3281 Query: 455 gtgcggttttgcct 468 |||||||| ||||| Sbjct: 3280 gtgcggttctgcct 3267
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 94 ataggaaaattcctataggtttacaatccaatgagattcctt 135 ||||||||||||||||||| || |||||| |||| ||||||| Sbjct: 109421 ataggaaaattcctataggatttcaatcctatgaaattcctt 109380
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | ||||||||| |||||||| ||||| | ||||||| Sbjct: 65781 gagaagattgaagccagtagaatggaccagacgataacaatcgttggtgtcctgttttgc 65722 Query: 467 ct 468 || Sbjct: 65721 ct 65720
>dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D04, full insert sequence Length = 3746 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | ||||||||| |||||||| ||||| | ||||||| Sbjct: 3262 gagaagattgaagccagtagaatggaccagacgataacaatcgttggtgtcctgttttgc 3203 Query: 467 ct 468 || Sbjct: 3202 ct 3201
>dbj|AK059649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C05, full insert sequence Length = 1335 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | ||||||||| |||||||| ||||| | ||||||| Sbjct: 599 gagaagattgaagccagtagaatggaccagacgataacaatcgttggtgtcctgttttgc 540 Query: 467 ct 468 || Sbjct: 539 ct 538
>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||||||||||||||| || || || |||| | |||||| ||||| || || ||| Sbjct: 3346 acccacagcaaggagaagatagatgcaagaaggatggaccagacaatgacgattgttggt 3287 Query: 455 gtgcggttttgcct 468 |||||||| ||||| Sbjct: 3286 gtgcggttctgcct 3273
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence Length = 161308 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||||||||||||||||||||||| Sbjct: 20393 aataatttatataaataataaata 20416
>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds Length = 3547 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 406 ggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttg 465 |||||||||||| || ||||||| | ||| ||||||||||| || || |||||||| || Sbjct: 3172 ggagaagattgacgcaaggaggatggaccaaacgatgacaatggttggcgtgcggttctg 3113 Query: 466 cctg 469 |||| Sbjct: 3112 cctg 3109
>gb|DQ014507.1| Eucalyptus grandis cellulose synthase 3 (CesA3) mRNA, complete cds Length = 3452 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggag 426 ||||||||||||||||| || ||||||||||| Sbjct: 3089 acccacagcaaggagaatatggaagccaggag 3058
>gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgt 450 |||||||| ||||||||||||| | |||||| ||||||||||| Sbjct: 3140 gagaagatcgaagccaggaggatggaccagacaatgacaatcgt 3097
>gb|AF200527.1|AF200527 Zea mays cellulose synthase-3 (CesA-3) mRNA, partial cds Length = 2828 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||||| ||||| || ||||| || ||||| | ||| |||||||| || |||||| Sbjct: 2396 acccacagcagcgagaatatggaagcaagaaggacggaccaaacgatgacgatggtcggt 2337 Query: 455 gtgcggtt 462 |||||||| Sbjct: 2336 gtgcggtt 2329
>gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgt 450 |||||||| ||||||||||||| | |||||| ||||||||||| Sbjct: 3373 gagaagatcgaagccaggaggatggaccagacaatgacaatcgt 3330
>gb|AC107453.14| Mus musculus chromosome 15, clone RP23-315F3, complete sequence Length = 193381 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||||||||||||||||||||||| Sbjct: 191769 aataatttatataaataataaata 191792
>gb|AC123860.4| Mus musculus BAC clone RP23-349N13 from chromosome 14, complete sequence Length = 191104 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 30 aataatttatataaataataaat 52 ||||||||||||||||||||||| Sbjct: 112581 aataatttatataaataataaat 112603
>gb|DQ124074.1| Coffea arabica clone MN-SSH3-C06 mRNA sequence Length = 241 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Plus Query: 377 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 436 ||||||||||||| || ||||| |||||||||||||| || || ||||| | | |||| Sbjct: 160 gtgaatggatcaattcgcacccagagcaaggagaagatggatgcaaggagtatggaccag 219 Query: 437 acgatgacaat 447 || |||||||| Sbjct: 220 acaatgacaat 230
>emb|CT025570.7| Mouse DNA sequence from clone RP24-82O4 on chromosome 14, complete sequence Length = 232110 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataataaat 52 ||||||||||||||||||||||| Sbjct: 217328 aataatttatataaataataaat 217306
>ref|XM_470347.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3905 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | |||||| |||||||| || ||||| | ||||||| Sbjct: 3197 gagaagattgaagccagcagaatggaccagacaatgacaattgttggtgtcctgttttgc 3138 Query: 467 ct 468 || Sbjct: 3137 ct 3136
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds Length = 3532 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Minus Query: 377 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggag 426 ||||| |||||||| | ||||||| |||||| ||||||||||| ||||| Sbjct: 3423 gtgaagggatcaactctcacccacaacaaggaaaagattgaagcaaggag 3374
>emb|AL359647.9| Human DNA sequence from clone RP11-431P10 on chromosome 13 Contains a chaperonin containing TCP1, subunit 5 (epsilon) (KIAA0098) (CCT5) pseudogene, complete sequence Length = 86050 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 42 aaataataaatacaagaattca 63 |||||||||||||||||||||| Sbjct: 81298 aaataataaatacaagaattca 81319
>gb|AC016304.8| Homo sapiens, clone RP11-25H11, complete sequence Length = 164336 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 35 tttatataaataataaatacaagaat 60 |||||||| ||||||||||||||||| Sbjct: 59524 tttatatatataataaatacaagaat 59499
>gb|AC068875.5| Homo sapiens chromosome 15, clone RP11-720L8, complete sequence Length = 166706 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 35 tttatataaataataaatacaagaat 60 |||||||| ||||||||||||||||| Sbjct: 153037 tttatatatataataaatacaagaat 153012
>gb|AC104809.5| Homo sapiens BAC clone RP11-637O3 from 2, complete sequence Length = 167196 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 410 aagattgaagccaggaggacag 431 |||||||||||||||||||||| Sbjct: 33619 aagattgaagccaggaggacag 33640
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | |||||| |||||||| || ||||| | ||||||| Sbjct: 136760 gagaagattgaagccagcagaatggaccagacaatgacaattgttggtgtcctgttttgc 136819 Query: 467 ct 468 || Sbjct: 136820 ct 136821
>dbj|AK100877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C10, full insert sequence Length = 4029 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | |||||| |||||||| || ||||| | ||||||| Sbjct: 3367 gagaagattgaagccagcagaatggaccagacaatgacaattgttggtgtcctgttttgc 3308 Query: 467 ct 468 || Sbjct: 3307 ct 3306
>dbj|AK101178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029A22, full insert sequence Length = 2325 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | |||||| |||||||| || ||||| | ||||||| Sbjct: 1992 gagaagattgaagccagcagaatggaccagacaatgacaattgttggtgtcctgttttgc 1933 Query: 467 ct 468 || Sbjct: 1932 ct 1931
>dbj|AK060814.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-H07, full insert sequence Length = 1180 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 407 gagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtgtgcggttttgc 466 ||||||||||||||||| || | | |||||| |||||||| || ||||| | ||||||| Sbjct: 515 gagaagattgaagccagcagaatggaccagacaatgacaattgttggtgtcctgttttgc 456 Query: 467 ct 468 || Sbjct: 455 ct 454
>gb|AC114512.5| Rattus norvegicus 5 BAC CH230-5N9 (Children's Hospital Oakland Research Institute) complete sequence Length = 247588 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 acatctatttacaaatgtgtt 204 ||||||||||||||||||||| Sbjct: 77532 acatctatttacaaatgtgtt 77512
>gb|DQ077190.3| Boehmeria nivea cellulose synthase CesA1 mRNA, partial cds Length = 3276 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Minus Query: 377 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 436 ||||||||||| | |||||||| ||||||||||| || ||||| || || | | ||| Sbjct: 2765 gtgaatggatcgatccgaacccagagcaaggagaatatggaagcaagaagaatggaccac 2706 Query: 437 acgatgacaatcgtcggtgtgcggttttg 465 ||||||||||| || || || |||||||| Sbjct: 2705 acgatgacaattgtaggggtacggttttg 2677
>emb|CR381579.22| Zebrafish DNA sequence from clone CH211-229N1 in linkage group 15, complete sequence Length = 130841 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 agcttaacctcatgaaaacgg 170 ||||||||||||||||||||| Sbjct: 120990 agcttaacctcatgaaaacgg 120970
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds Length = 3640 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaat 447 ||||| ||||||||||| || || || ||||| | || ||||||||||||||| Sbjct: 3215 acccatagcaaggagaaaatggaggcaaggagaatagaccagacgatgacaat 3163
>gb|AF546863.1| Rhodobryum umbraculum atpB-rbcL intergenic spacer, partial sequence Length = 682 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 303 aatttatataaataataaata 283
>gb|AF546861.1| Rhodobryum keniae atpB-rbcL intergenic spacer, partial sequence Length = 525 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 144 aatttatataaataataaata 124
>gb|AF546860.1| Rhodobryum giganteum atpB-rbcL intergenic spacer, partial sequence Length = 668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 288 aatttatataaataataaata 268
>gb|AF546854.1| Haplodontium reticulatum atpB-rbcL intergenic spacer, partial sequence Length = 683 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 292 aatttatataaataataaata 272
>gb|AF546849.1| Bryum purpurascens atpB-rbcL intergenic spacer, partial sequence Length = 682 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 296 aatttatataaataataaata 276
>gb|AF546848.1| Bryum pseudotriquetrum atpB-rbcL intergenic spacer, partial sequence Length = 624 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 244 aatttatataaataataaata 224
>gb|AF546847.1| Bryum pallescens atpB-rbcL intergenic spacer, partial sequence Length = 565 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 224 aatttatataaataataaata 204
>gb|AF546844.1| Bryum muehlenbeckii atpB-rbcL intergenic spacer, partial sequence Length = 679 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 299 aatttatataaataataaata 279
>gb|AF546842.1| Bryum lisae atpB-rbcL intergenic spacer, partial sequence Length = 681 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 301 aatttatataaataataaata 281
>gb|AF546839.1| Bryum donianum atpB-rbcL intergenic spacer, partial sequence Length = 665 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 287 aatttatataaataataaata 267
>gb|AF546836.1| Bryum cellulare atpB-rbcL intergenic spacer, partial sequence Length = 669 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 302 aatttatataaataataaata 282
>gb|AF546835.1| Bryum capillare atpB-rbcL intergenic spacer, partial sequence Length = 642 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 283 aatttatataaataataaata 263
>gb|AF546833.1| Bryum blandum atpB-rbcL intergenic spacer, partial sequence Length = 684 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 299 aatttatataaataataaata 279
>gb|AF546832.1| Bryum billarderi atpB-rbcL intergenic spacer, partial sequence Length = 681 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 300 aatttatataaataataaata 280
>gb|AF546831.1| Bryum bicolor atpB-rbcL intergenic spacer, partial sequence Length = 642 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 291 aatttatataaataataaata 271
>gb|AF546829.1| Bryum archangelicum atpB-rbcL intergenic spacer, partial sequence Length = 627 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 293 aatttatataaataataaata 273
>gb|AF546827.1| Bryum alpinum atpB-rbcL intergenic spacer, partial sequence Length = 649 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 298 aatttatataaataataaata 278
>gb|AF546826.1| Bryum algovicum atpB-rbcL intergenic spacer, partial sequence Length = 671 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 290 aatttatataaataataaata 270
>gb|AF546825.1| Brachymenium systylium atpB-rbcL intergenic spacer, partial sequence Length = 616 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 253 aatttatataaataataaata 233
>gb|AF546823.1| Brachymenium nepalense atpB-rbcL intergenic spacer, partial sequence Length = 689 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 302 aatttatataaataataaata 282
>gb|AF546821.1| Brachymenium capitulatum atpB-rbcL intergenic spacer, partial sequence Length = 662 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 279 aatttatataaataataaata 259
>gb|AF546815.1| Acidodontium sprucei atpB-rbcL intergenic spacer, partial sequence Length = 670 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 299 aatttatataaataataaata 279
>gb|AF546814.1| Acidodontium seminerve atpB-rbcL intergenic spacer, partial sequence Length = 624 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 269 aatttatataaataataaata 249
>gb|AF546813.1| Acidodontium ramicola atpB-rbcL intergenic spacer, partial sequence Length = 640 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 299 aatttatataaataataaata 279
>gb|AF546812.1| Acidodontium megalocarpum atpB-rbcL intergenic spacer, partial sequence Length = 638 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 304 aatttatataaataataaata 284
>gb|AF546811.2| Acidodontium heteroneuron atpB-rbcL intergenic spacer, partial sequence Length = 653 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 291 aatttatataaataataaata 271
>emb|BX323046.3| Human DNA sequence from clone RP11-11N7 on chromosome 1 Contains the FAM36A gene for member A of family with sequence similarity 36, the gene for a novel protein (FLJ37978, FLJ30202), the HNRPU gene for heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) and three CpG islands, complete sequence Length = 124570 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 29754 aatttatataaataataaata 29734
>emb|AL772225.5| Mouse DNA sequence from clone RP23-235D17 on chromosome 11 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 132761 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 ctgttatattttctgtctcta 312 ||||||||||||||||||||| Sbjct: 50223 ctgttatattttctgtctcta 50203
>emb|BX324229.7| Zebrafish DNA sequence from clone RP71-10D19, complete sequence Length = 72241 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttatataaataataaataca 55 ||||||||||||||||||||| Sbjct: 27486 tttatataaataataaataca 27466
>emb|BX005169.18| Zebrafish DNA sequence from clone CH211-81D10 in linkage group 14, complete sequence Length = 164868 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 aataatttatataaataataa 50 ||||||||||||||||||||| Sbjct: 108525 aataatttatataaataataa 108545
>emb|BX890584.6| Mouse DNA sequence from clone RP23-160I11 on chromosome X, complete sequence Length = 120359 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 ctccaaacataaattttctct 266 ||||||||||||||||||||| Sbjct: 68904 ctccaaacataaattttctct 68924
>gb|AC160725.1| Ornithorhynchus anatinus chromosome UNK clone OABb-130A1, complete sequence Length = 108108 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 tctctacaatctcccattttc 327 ||||||||||||||||||||| Sbjct: 14243 tctctacaatctcccattttc 14223
>gb|AC022288.5|AC022288 Arabidopsis thaliana chromosome 1 BAC T3M13 genomic sequence, complete sequence Length = 80309 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 15403 aatttatataaataataaata 15423
>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence, complete sequence Length = 82053 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 47854 aatttatataaataataaata 47834
>gb|AC006037.2| Homo sapiens BAC clone RP11-263G22 from 2, complete sequence Length = 108711 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 288 atcactgttatattttctgtctcta 312 |||||||||||||||||||| |||| Sbjct: 83707 atcactgttatattttctgtttcta 83731
>gb|AC015446.4|AC015446 Arabidopsis thaliana chromosome I BAC F12G12 genomic sequence, complete sequence Length = 125632 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 121958 aatttatataaataataaata 121978
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 93189 aatttatataaataataaata 93209
>gb|AY163100.1| Bryum radiculosum atpB-rbcL intergenic spacer, partial sequence Length = 562 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 263 aatttatataaataataaata 243
>gb|AY163099.1| Bryum orthothecium atpB-rbcL intergenic spacer, partial sequence Length = 652 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 293 aatttatataaataataaata 273
>gb|AY163097.1| Bryum coronatum atpB-rbcL intergenic spacer, partial sequence Length = 639 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 254 aatttatataaataataaata 234
>gb|AY163093.1| Anomobryum prostratum atpB-rbcL intergenic spacer, partial sequence Length = 671 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 294 aatttatataaataataaata 274
>gb|AY163092.1| Anomobryum humillimum atpB-rbcL intergenic spacer, partial sequence Length = 676 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 299 aatttatataaataataaata 279
>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete sequence Length = 99960 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 aatttatataaataataaata 53 ||||||||||||||||||||| Sbjct: 88446 aatttatataaataataaata 88466
>emb|AL954708.10| Zebrafish DNA sequence from clone CH211-160I4, complete sequence Length = 163996 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataataa 50 ||||||||||||||||||||| Sbjct: 117546 aataatttatataaataataa 117526
>emb|BX248116.8| Zebrafish DNA sequence from clone CH211-245G15 in linkage group 9, complete sequence Length = 161065 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 ttatataaataataaatacaa 56 ||||||||||||||||||||| Sbjct: 83653 ttatataaataataaatacaa 83633
>emb|CT573052.2| Medicago truncatula chromosome 5 clone mth2-60f21, COMPLETE SEQUENCE Length = 131869 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 taatttatataaataataaatacaa 56 |||||||| |||||||||||||||| Sbjct: 48902 taatttatttaaataataaatacaa 48926
>emb|CR931784.7| Zebrafish DNA sequence from clone DKEY-237H12 in linkage group 14, complete sequence Length = 223042 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataataa 50 ||||||||||||||||||||| Sbjct: 100461 aataatttatataaataataa 100441
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cataggaaaattcctatagg 112 |||||||||||||||||||| Sbjct: 138891 cataggaaaattcctatagg 138910
>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete sequence Length = 258658 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tatataaataataaatacaa 56 |||||||||||||||||||| Sbjct: 177723 tatataaataataaatacaa 177742
>gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5 of 7 of the complete sequence Length = 252394 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||||| ||||||||||||||||| Sbjct: 136090 aataatgtatataaataataaata 136113
>gb|AY585783.1| Anisops debilis isolate 504 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 437 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||| ||||||||||||||||||| Sbjct: 191 aatattttatataaataataaata 214
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cataggaaaattcctatagg 112 |||||||||||||||||||| Sbjct: 15001 cataggaaaattcctatagg 15020
>emb|CR352287.12| Zebrafish DNA sequence from clone DKEY-158P1 in linkage group 24, complete sequence Length = 153729 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tatataaataataaatacaa 56 |||||||||||||||||||| Sbjct: 14967 tatataaataataaatacaa 14948
>gb|AC004605.1|HUAC004605 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-248F7, complete sequence Length = 259474 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 cactgttatattttctgtctctac 313 |||||||||||||||| ||||||| Sbjct: 225904 cactgttatattttctatctctac 225927
>gb|AC129319.4| Mus musculus BAC clone RP24-127J16 from chromosome 8, complete sequence Length = 169835 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||||||||||||||| ||||||| Sbjct: 132778 aataatttatataaattataaata 132801
>gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome 8, complete sequence Length = 215576 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||||||||||||||| ||||||| Sbjct: 26566 aataatttatataaattataaata 26589
>gb|AC125409.3| Mus musculus BAC clone RP23-127O4 from 12, complete sequence Length = 209670 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cacagcaaggagaagattga 417 |||||||||||||||||||| Sbjct: 30998 cacagcaaggagaagattga 30979
>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence Length = 257003 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cactgttatattttctgtct 309 |||||||||||||||||||| Sbjct: 178996 cactgttatattttctgtct 179015
>gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complete sequence Length = 182204 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cactgttatattttctgtct 309 |||||||||||||||||||| Sbjct: 158652 cactgttatattttctgtct 158633
>gb|AC124193.2| Mus musculus BAC clone RP23-277F3 from 16, complete sequence Length = 190347 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttatataaataataaataca 55 |||||||||||||||||||| Sbjct: 75055 ttatataaataataaataca 75074
>emb|CR751228.19| Zebrafish DNA sequence from clone DKEY-168J9 in linkage group 22, complete sequence Length = 124694 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 40570 atttatataaataataaata 40551
>ref|XM_757687.1| Theileria parva strain Muguga chromosome 3 3-oxo-5-alpha-steroid 4-dehydrogenase (TP03_0656) partial mRNA Length = 984 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aataatttatataaataataaata 53 ||||||| |||||||||||||||| Sbjct: 31 aataattaatataaataataaata 8
>gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete sequence Length = 153556 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ataatttatataaataataaatac 54 ||||||||||||||||||| |||| Sbjct: 59788 ataatttatataaataatacatac 59811
>gb|AC137825.26| Medicago truncatula clone mth2-23j1, complete sequence Length = 130938 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tatataaataataaatacaa 56 |||||||||||||||||||| Sbjct: 100584 tatataaataataaatacaa 100603
>gb|AC164100.2| Mus musculus BAC clone RP23-11E1 from chromosome 14, complete sequence Length = 214128 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 31814 atttatataaataataaata 31795
>emb|AL591115.6| Human DNA sequence from clone RP11-314E23 on chromosome 6 Contains a novel gene, complete sequence Length = 91763 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 ataatttatataaataataa 50 |||||||||||||||||||| Sbjct: 67022 ataatttatataaataataa 67041
>emb|AL451049.11| Human DNA sequence from clone RP11-63A2 on chromosome 10 Contains a novel gene and a CpG island, complete sequence Length = 166973 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataata 49 |||||||||||||||||||| Sbjct: 88995 aataatttatataaataata 88976
>emb|AL512644.10| Human DNA sequence from clone RP11-726B11 on chromosome 9, complete sequence Length = 143919 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aataatttatataaataataaata 53 ||||||||| |||||||||||||| Sbjct: 75788 aataatttagataaataataaata 75765
>gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence Length = 270695 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttatataaataataaataca 55 |||||||||||||||||||| Sbjct: 180144 ttatataaataataaataca 180125
>emb|AL162573.15| Human DNA sequence from clone RP11-275J18 on chromosome 13, complete sequence Length = 166509 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||| ||||||||||||||||||| Sbjct: 40699 aatattttatataaataataaata 40722
>emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on chromosome 9 Contains the 3' end of the DDX31 gene for DEAD/H box polypeptide 31, the BARHL1 gene for BarH-like 1 (Drosophila) protein, two novel genes and three CpG islands, complete sequence Length = 189821 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 tcactgttatattttctgtctcta 312 |||||||| ||||||||||||||| Sbjct: 18520 tcactgttctattttctgtctcta 18543
>emb|CR387919.7| Zebrafish DNA sequence from clone DKEY-120I24, complete sequence Length = 110378 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 24494 atttatataaataataaata 24475
>emb|X03240.1|MIDYRRN Drosophila yakuba complete mitochondrial sequence Length = 16019 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||||||| ||||||||||||||| Sbjct: 14996 aataatttttataaataataaata 15019
>gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Hospital Oakland Research Institute) complete sequence Length = 242500 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataata 49 |||||||||||||||||||| Sbjct: 184276 aataatttatataaataata 184257
>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 Length = 272698 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aataatttatataaataataaata 53 |||| ||||||||||||||||||| Sbjct: 214744 aatattttatataaataataaata 214721
>emb|CR382379.6| Zebrafish DNA sequence from clone DKEY-175N5 in linkage group 7, complete sequence Length = 159548 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ttatattttctgtctctaca 314 |||||||||||||||||||| Sbjct: 123192 ttatattttctgtctctaca 123173
>emb|CR932960.3| Medicago truncatula chromosome 5 clone mth4-7a5, COMPLETE SEQUENCE Length = 199033 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aaataataaatacaagaatt 61 |||||||||||||||||||| Sbjct: 178971 aaataataaatacaagaatt 178952
>emb|CR786576.5| Zebrafish DNA sequence from clone DKEY-223D7 in linkage group 2, complete sequence Length = 202469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aatttatataaataataaat 52 |||||||||||||||||||| Sbjct: 94006 aatttatataaataataaat 94025
>gb|AC091936.2| Homo sapiens chromosome 5 clone RP11-325C20, complete sequence Length = 89681 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 caaacataaattttctctgg 268 |||||||||||||||||||| Sbjct: 9698 caaacataaattttctctgg 9679
>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence Length = 198687 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataata 49 |||||||||||||||||||| Sbjct: 155470 aataatttatataaataata 155451
>emb|CR384085.5| Zebrafish DNA sequence from clone CH211-267K7 in linkage group 5, complete sequence Length = 140947 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aataatttatataaataataaata 53 ||||||||||||| |||||||||| Sbjct: 93300 aataatttatatagataataaata 93277
>emb|BX572632.7| Zebrafish DNA sequence from clone CH211-162I20 in linkage group 5, complete sequence Length = 162716 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 ||||||||||||| |||||||||| Sbjct: 76277 aataatttatatagataataaata 76300
>gb|AC140068.18| Medicago truncatula clone mth2-15l24, complete sequence Length = 111620 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aaataataaatacaagaatt 61 |||||||||||||||||||| Sbjct: 83533 aaataataaatacaagaatt 83552
>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence Length = 185624 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aataatttatataaataataaata 53 |||||| ||||||||||||||||| Sbjct: 104379 aataatatatataaataataaata 104356
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 taaataataaatacaagaattcat 64 |||||||| ||||||||||||||| Sbjct: 2522140 taaataatgaatacaagaattcat 2522117
>gb|AC008972.8| Homo sapiens chromosome 5 clone CTD-2376I4, complete sequence Length = 98842 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 caaacataaattttctctgg 268 |||||||||||||||||||| Sbjct: 71917 caaacataaattttctctgg 71936
>gb|AC003103.2| Homo sapiens chromosome 17, clone CTC-268N12, complete sequence Length = 101800 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 atcactgttatattttctgtctct 311 ||||||||| |||||||||||||| Sbjct: 67394 atcactgttttattttctgtctct 67417
>gb|AC104619.5| Homo sapiens BAC clone RP11-192C21 from 4, complete sequence Length = 187749 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||||||||||||| ||||||||| Sbjct: 139046 aataatttatataattaataaata 139069
>gb|AF040643.1| Caenorhabditis elegans cosmid F14D2, complete sequence Length = 35188 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aaactcctccaaaatgtgaa 22 |||||||||||||||||||| Sbjct: 6748 aaactcctccaaaatgtgaa 6767
>gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, complete sequence Length = 159956 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 caaacataaattttctctgg 268 |||||||||||||||||||| Sbjct: 5294 caaacataaattttctctgg 5313
>gb|AC093044.1| Drosophila melanogaster, chromosome 2L, region 38A-38B, BAC clone BACR10H13, complete sequence Length = 165585 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataata 49 |||||||||||||||||||| Sbjct: 51242 aataatttatataaataata 51223
>ref|NM_062107.1| Caenorhabditis elegans F14D2.6 (F14D2.6) mRNA, complete cds Length = 2997 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aaactcctccaaaatgtgaa 22 |||||||||||||||||||| Sbjct: 2641 aaactcctccaaaatgtgaa 2660
>gb|AC009252.9|AC009252 Drosophila melanogaster, chromosome 2L, region 38A-38A, BAC clone BACR22E16, complete sequence Length = 164361 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataata 49 |||||||||||||||||||| Sbjct: 111366 aataatttatataaataata 111347
>emb|BX322624.8| Zebrafish DNA sequence from clone DKEY-273E21 in linkage group 2, complete sequence Length = 118516 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 104089 atttatataaataataaata 104070
>gb|AC100787.17| Homo sapiens chromosome 17, clone CTD-2589J4, complete sequence Length = 233062 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 actcctccaaaatgtgaagg 24 |||||||||||||||||||| Sbjct: 192921 actcctccaaaatgtgaagg 192940
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cataggaaaattcctatagg 112 |||||||||||||||||||| Sbjct: 19419665 cataggaaaattcctatagg 19419684
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 27507357 atttatataaataataaata 27507376
>gb|AF310886.1|AF310886 Dictyostelium discoideum RacA (racA) gene, complete cds Length = 3457 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 |||||| ||||||||||||||||| Sbjct: 457 aataatatatataaataataaata 480
>gb|AC092128.3| Homo sapiens chromosome 16 clone RP11-133M24, complete sequence Length = 202725 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cactgttatattttctgtctctac 313 |||||||||||||||| ||||||| Sbjct: 173676 cactgttatattttctatctctac 173653
>emb|BX511014.4| Zebrafish DNA sequence from clone CH211-143E20 in linkage group 19, complete sequence Length = 154861 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataata 49 |||||||||||||||||||| Sbjct: 5735 aataatttatataaataata 5716
>gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence Length = 182870 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 63185 atttatataaataataaata 63166
>gb|AC117070.2| Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence Length = 136240 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 76528 atttatataaataataaata 76547
>gb|AC138627.1| Homo sapiens chromosome 16 clone RP11-42H13, complete sequence Length = 170920 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 cactgttatattttctgtctctac 313 |||||||||||||||| ||||||| Sbjct: 164197 cactgttatattttctatctctac 164220
>gb|AC079248.5| Homo sapiens BAC clone RP11-24J11 from 2, complete sequence Length = 128535 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 attttgacaactttctcaaa 230 |||||||||||||||||||| Sbjct: 119355 attttgacaactttctcaaa 119374
>dbj|AP003706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1125_C04 Length = 98476 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 28060 atttatataaataataaata 28079
>emb|BX323030.5| Zebrafish DNA sequence from clone DKEYP-77D7 in linkage group 1, complete sequence Length = 181363 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tatataaataataaatacaa 56 |||||||||||||||||||| Sbjct: 20678 tatataaataataaatacaa 20697
>dbj|BS000064.1| Pan troglodytes chromosome 22 clone:RP43-044K09, map 22, complete sequences Length = 178960 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ataatttatataaataataa 50 |||||||||||||||||||| Sbjct: 13926 ataatttatataaataataa 13907
>dbj|BS000063.1| Pan troglodytes chromosome 22 clone:PTB-428P03, map 22, complete sequences Length = 136131 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ataatttatataaataataa 50 |||||||||||||||||||| Sbjct: 127316 ataatttatataaataataa 127297
>emb|BX530036.7| Zebrafish DNA sequence from clone DKEY-93M18 in linkage group 21, complete sequence Length = 211643 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 aatttatataaataataaatacaa 56 ||||||||||||||||||| |||| Sbjct: 92953 aatttatataaataataaacacaa 92976
>gb|AF240629.1|AF240629 Homo sapiens chromosome 21 map 21q21 clone B47C12, complete sequence Length = 151696 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ataatttatataaataataa 50 |||||||||||||||||||| Sbjct: 126433 ataatttatataaataataa 126414
>emb|AL954171.10| Zebrafish DNA sequence from clone CH211-284B7 in linkage group 2, complete sequence Length = 148854 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gtctattacatctatttaca 196 |||||||||||||||||||| Sbjct: 119873 gtctattacatctatttaca 119854
>emb|AL845284.4| Zebrafish DNA sequence from clone DKEY-277C13, complete sequence Length = 226168 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gcttaacctcatgaaaacgg 170 |||||||||||||||||||| Sbjct: 151311 gcttaacctcatgaaaacgg 151330
>emb|CR847882.13| Zebrafish DNA sequence from clone RP71-18L21 in linkage group 19, complete sequence Length = 149067 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataata 49 |||||||||||||||||||| Sbjct: 79058 aataatttatataaataata 79039
>emb|CR381668.8| Zebrafish DNA sequence from clone CH211-238A12 in linkage group 18, complete sequence Length = 155228 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 41796 atttatataaataataaata 41815 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 35851 atttatataaataataaata 35870 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 29901 atttatataaataataaata 29920
>gb|AY104236.1| Zea mays PCO121439 mRNA sequence Length = 2872 Score = 40.1 bits (20), Expect = 6.3 Identities = 56/68 (82%) Strand = Plus / Minus Query: 395 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 454 |||||||||| ||||| || ||||| || ||||| | ||| || ||||| || |||||| Sbjct: 2418 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 2359 Query: 455 gtgcggtt 462 |||||||| Sbjct: 2358 gtgcggtt 2351
>gb|AC157488.1| Medicago truncatula chromosome 2 BAC clone mte1-33n12, complete sequence Length = 93219 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataata 49 |||||||||||||||||||| Sbjct: 87749 aataatttatataaataata 87730
>gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74 of 83 of the complete sequence Length = 157875 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aataatttatataaataata 49 |||||||||||||||||||| Sbjct: 26573 aataatttatataaataata 26554
>gb|AC005924.2|AC005924 Homo sapiens Chr.14 PAC RPCI4-794B2 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 111107 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aataatttatataaataataaata 53 ||||||||| |||||||||||||| Sbjct: 22934 aataatttaaataaataataaata 22911
>emb|AL110118.7|CNS018P3 Human chromosome 14 DNA sequence BAC R-371E8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192265 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aataatttatataaataataaata 53 ||||||||| |||||||||||||| Sbjct: 35157 aataatttaaataaataataaata 35180
>emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-907D1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203266 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 288 atcactgttatattttctgtctctacaa 315 ||||||||| || ||||||||||||||| Sbjct: 30083 atcactgttctactttctgtctctacaa 30056
>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ataatttatataaataataa 50 |||||||||||||||||||| Sbjct: 312321 ataatttatataaataataa 312302
>gb|AC100406.7| Mus musculus chromosome 9, clone RP23-134M7, complete sequence Length = 183837 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aataatttatataaataataaata 53 |||||| ||||||||||||||||| Sbjct: 116594 aataatatatataaataataaata 116571
>emb|BX000705.13| Zebrafish DNA sequence from clone DKEY-76D18, complete sequence Length = 255779 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 68160 atttatataaataataaata 68179
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 taatttatataaataataaa 51 |||||||||||||||||||| Sbjct: 1314287 taatttatataaataataaa 1314306
>gb|AC134604.5| Mus musculus BAC clone RP23-296I5 from 12, complete sequence Length = 203284 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cacagcaaggagaagattga 417 |||||||||||||||||||| Sbjct: 178637 cacagcaaggagaagattga 178618
>emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chromosome 14, complete sequence Length = 200375 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 11696 atttatataaataataaata 11715
>gb|M97514.1|YSCMTCYTOC Saccharomyces douglasii mitochondrial cytochrome c oxidase subunit I (COXI) gene, complete cds Length = 8622 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 1703 atttatataaataataaata 1722
>dbj|AP004904.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT10C05, TM0062, complete sequence Length = 81367 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aatttatataaataataaat 52 |||||||||||||||||||| Sbjct: 57963 aatttatataaataataaat 57944
>dbj|AP004509.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16K17, TM0037a, complete sequence Length = 84322 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 acccacagcaaggagaagattgaagcca 422 ||||||||||||||||| || ||||||| Sbjct: 44255 acccacagcaaggagaaaatagaagcca 44282
>emb|AL928968.7| Zebrafish DNA sequence from clone CH211-103C14, complete sequence Length = 173210 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atttatataaataataaata 53 |||||||||||||||||||| Sbjct: 80608 atttatataaataataaata 80627
>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195115 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 288 atcactgttatattttctgtctctacaa 315 ||||||||| || ||||||||||||||| Sbjct: 975 atcactgttctactttctgtctctacaa 1002
>emb|X54011.1|DTMTRNA D.teissieri mitochondrial DNA for tRNA-fmet, tRNA-Ile, tRNA-Gln & tRNA-Val Length = 2305 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aataatttatataaataataaata 53 |||||||| ||||||||||||||| Sbjct: 1449 aataatttttataaataataaata 1426
>emb|X05915.1|MIDYTRN D. yakuba mitochondrial DNA for origin of replication, small ribosomal RNA , transfer RNAs tRNA-fMet, tRNA-Gln, tRNA-Ile and tRNA-Val Length = 2290 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aataatttatataaataataaata 53 |||||||| ||||||||||||||| Sbjct: 1435 aataatttttataaataataaata 1412
>emb|AL672273.9| Mouse DNA sequence from clone RP23-15A12 on chromosome 2, complete sequence Length = 202965 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 gaataatttatataaataat 48 |||||||||||||||||||| Sbjct: 195572 gaataatttatataaataat 195591
>emb|AL672067.5| Mouse DNA sequence from clone RP23-5P1 on chromosome X, complete sequence Length = 225196 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tatataaataataaatacaa 56 |||||||||||||||||||| Sbjct: 68096 tatataaataataaatacaa 68115
>emb|AL844493.6| Mouse DNA sequence from clone RP23-396G18 on chromosome 2, complete sequence Length = 166025 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttatataaataataaataca 55 |||||||||||||||||||| Sbjct: 142091 ttatataaataataaataca 142110
>emb|AL132641.3|CNS01DT6 Human chromosome 14 DNA sequence BAC C-3175A2 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 136603 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 ctgttatattttctgtctct 311 |||||||||||||||||||| Sbjct: 65525 ctgttatattttctgtctct 65506
>dbj|AP000957.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B781M3, LL56-APP region, complete sequence Length = 190937 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ataatttatataaataataa 50 |||||||||||||||||||| Sbjct: 84410 ataatttatataaataataa 84391 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,350,995 Number of Sequences: 3902068 Number of extensions: 5350995 Number of successful extensions: 140739 Number of sequences better than 10.0: 217 Number of HSP's better than 10.0 without gapping: 211 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 139889 Number of HSP's gapped (non-prelim): 840 length of query: 469 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 447 effective length of database: 17,147,199,772 effective search space: 7664798298084 effective search space used: 7664798298084 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
