>CADH1_ARATH (P48523) Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) (CAD)|
          Length = 365

 Score = 32.3 bits (72), Expect = 0.47
 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +1

Query: 58  EHLRDATKFTVANRPSNSKRIKSNLTTATKQLPK-PPVDPILSCPNIKAHLVISPPLNQF 234
           EHL  A  + V++ P+  +R+  +L      +P   P+DP L+C  +   L++   +N  
Sbjct: 223 EHL-GADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTP 281

Query: 235 LRPITPV 255
           L+ +TP+
Sbjct: 282 LQFVTPL 288

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
 Frame = +1

Query: 100 PSNSKRIKSNLTTATKQLPKPPVD--PILSCPNIKAHLVISPPLNQFLRPITPV---GPS 264
           PS+ +  K+ + T  + +PKPP +  P  + P +K+ +  + P    ++ +      G +
Sbjct: 601 PSSVQEKKTRVPTKAEPMPKPPPETTPTPATPKVKSGVRRAEPATPVVKAVPEAPKGGEA 660

Query: 265 NSIFFFPYQM------KSILPTWNFSDHRRSSDSQFHGVLE 369
             +   PY        +S+  T   SD   SS S+  GV++
Sbjct: 661 EDLVGKPYSQDASRSPQSLSDTGYSSDGISSSQSEITGVVQ 701

>SID2_USTMA (O43103) Ferrichrome siderophore peptide synthetase (EC 6.-.-.-)|
          Length = 3947

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 123 FYSFGIGGTICNCKLGGVSQ 64
           FY++G+GGTIC+C  G + Q
Sbjct: 478 FYTWGLGGTICSCPRGVLLQ 497

>FTSK_HELPJ (Q9ZM87) DNA translocase ftsK|
          Length = 844

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +1

Query: 94  NRPSNSKRIKSNLTTATKQLPKPPVDPILSCPNIKAHLVISPPLNQFLRPITP 252
           N PS+S++ ++N     + L + P+D   + PN ++ L I  P N  L    P
Sbjct: 178 NTPSDSQKKETNNDKEKENLKENPIDENHNTPNEESFLAIPTPYNTTLNNSEP 230

>COAT_MUMIV (P03137) Coat protein VP1 [Contains: Coat protein VP2]|
          Length = 716

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 199 AHLVISPPLNQFLRPITPVGPSNSIFF 279
           A LV+ PPLN  L    P+G  N I F
Sbjct: 546 APLVVPPPLNGILTNANPIGTKNDIHF 572

>COAT_MUMIM (P07302) Coat protein VP1 [Contains: Coat protein VP2]|
          Length = 718

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 199 AHLVISPPLNQFLRPITPVGPSNSIFF 279
           A LV+ PPLN  L    P+G  N I F
Sbjct: 548 APLVVPPPLNGILTNANPIGTKNDIHF 574

>XYNB_PRUPE (P83344) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152)|
           (Fragment)
          Length = 461

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 417 GGRKVALGGHTLHVGDLKHTVELR 346
           G R++ LG H L +GDL H V L+
Sbjct: 430 GIRRIPLGEHKLQIGDLSHHVSLQ 453

>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 49  PNNE-HLRDATKFTVANRPSNSKRIKSNLTTATKQLPKPPVDPILSCPNIKAHLVISPPL 225
           P+ E HL  AT   V + P++ +++ +       + P PP D  L  P   A L  SPP 
Sbjct: 213 PSQESHLAPAT---VTSTPASERQLPARQKDTAVRRPIPPADGCLHTPVQAAGLATSPPR 269

Query: 226 NQ 231
            Q
Sbjct: 270 AQ 271

>IMA1_RAT (P83953) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)|
           (Importin alpha 5)
          Length = 538

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/60 (21%), Positives = 22/60 (36%)
 Frame = +1

Query: 31  NELFPLPNNEHLRDATKFTVANRPSNSKRIKSNLTTATKQLPKPPVDPILSCPNIKAHLV 210
           N +   P      D T+   +N P               + P PP+D +++ P + A  V
Sbjct: 73  NNMEMAPGGVITSDMTEMIFSNSPEQQLSATQKFRKLLSKEPNPPIDEVINTPGVVARFV 132

>ALB32_ARATH (Q8L718) Inner membrane ALBINO3-like protein 2, chloroplast|
           precursor (Ath5)
          Length = 525

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +1

Query: 130 LTTATKQLPKPPVDPILSCPNIKAHLVISPPLNQFLRPITPVGPSNSIFFFPY 288
           L T ++ LPK P+ PI   P +K  +      + FL+    +G  + ++FFPY
Sbjct: 124 LKTISELLPKLPM-PIPETPTLKGSI---DQFSHFLKESRAIGCPSFLWFFPY 172

>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 151 LPKPPVDPILSCPNIKAHLVISPPLNQFLRPITPVGPSNSIFFFP 285
           LP+PP     + P++  H V+SPP      P  P  PSN     P
Sbjct: 839 LPQPPEHS--TPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALP 881

>VL2_HPV6A (Q84297) Minor capsid protein L2|
          Length = 459

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +1

Query: 154 PKPPVDP----ILSCPNIKAHLVISPPLNQFLRPITPVGPSNS 270
           P+PPV+     ++S P I +H +   PL+ F+   +  GP++S
Sbjct: 168 PQPPVEANGHILISAPTITSHPIEEIPLDTFVISSSDSGPTSS 210

>GMEB1_HUMAN (Q9Y692) Glucocorticoid modulatory element-binding protein 1|
           (GMEB-1) (Parvovirus initiation factor p96) (PIF p96)
           (DNA-binding protein p96PIF)
          Length = 573

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
 Frame = +1

Query: 115 RIKS----NLTTATKQLPKPPVDPILSCPNIKAHLVISPPLNQ----FLRP--ITPVGPS 264
           R+KS    N+       PKPP  P L  P     L  SPP+ Q     + P  ITPVG S
Sbjct: 357 RLKSQTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQS 416

Query: 265 NSIFFFP 285
            S+   P
Sbjct: 417 FSMGNIP 423

>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 151 LPKPPVDPILSCPNIKAHLVISPPLNQFLRPITPVGPSNSIFFFP 285
           LP+PP     + P++  H V+SPP      P  P  PSN     P
Sbjct: 841 LPQPPEHS--TPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALP 883

>Y1465_ARCFU (O28807) Hypothetical protein AF1465|
          Length = 149

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 145 KQLPKPPVDPILSCPNIKAHLVISPPLNQFLRPITPVGPSNSI 273
           K  PKP VD  ++ PN +    IS P+       +PV P N +
Sbjct: 31  KPEPKPEVDEKVTVPNPETTSNISAPMPPLKNSTSPVPPVNDL 73

>VL2_HPV6B (P03106) Minor capsid protein L2|
          Length = 459

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +1

Query: 154 PKPPVDP----ILSCPNIKAHLVISPPLNQFLRPITPVGPSNS 270
           P+PPV+     ++S P + +H +   PL+ F+   +  GP++S
Sbjct: 168 PQPPVEANGHILISAPTVTSHPIEEIPLDTFVVSSSDSGPTSS 210

>ALDO2_ARATH (Q7G192) Aldehyde oxidase 2 (EC 1.2.3.1) (AtAO-2) (AtAO3)|
          Length = 1321

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 10/59 (16%)
 Frame = -3

Query: 164 GGFGSCFVAVVKFDFIRLELEGRFATVNLVASLKCSL----------FGRGNSSFHQLH 18
           GG G+C V + KFD +  ++E    TV+   +L CS+           G     FH +H
Sbjct: 45  GGCGACVVLLSKFDPVLQKVED--FTVSSCLTLLCSVNHCNITTSEGLGNSRDGFHPIH 101

>IMA1_MOUSE (Q60960) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)|
           (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein
           interactor 1) (Importin alpha S1)
          Length = 538

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/60 (21%), Positives = 21/60 (35%)
 Frame = +1

Query: 31  NELFPLPNNEHLRDATKFTVANRPSNSKRIKSNLTTATKQLPKPPVDPILSCPNIKAHLV 210
           N +   P      D T    +N P               + P PP+D +++ P + A  V
Sbjct: 73  NNMEMAPGGVITSDMTDMIFSNSPEQQLSATQKFRKLLSKEPNPPIDEVINTPGVVARFV 132

>UNC13_CAEEL (P27715) Phorbol ester/diacylglycerol-binding protein unc-13|
           (Uncoordinated protein 13)
          Length = 2155

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = +1

Query: 73  ATKFTVANRPSNSKRIKSNLTTATKQLPKPPVDPILSCPNIKAHLVISPPLNQFLR--PI 246
           AT+F   +  +N+   K+ L + T+  P P   P  S  N    L +      +L   P 
Sbjct: 650 ATRFYANHNNNNNNVSKNELDSTTETPPDPSRTPSTSSMNPVPSLAVPMSPGPYLNSDPP 709

Query: 247 TPVGPSNSIFFFPYQMK 297
           +PV P+  I    Y++K
Sbjct: 710 SPVSPNPQIKRSIYRIK 726

>SCD6_YEAST (P45978) Protein SCD6|
          Length = 349

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/57 (22%), Positives = 25/57 (43%)
 Frame = +2

Query: 248 PRSAHPIPSSFSPIK*NRSSLRGIFLITVDHQTRSSTVCLRSPTCSVWPPSATLRPP 418
           P   +P P+ ++ +K N S ++ + ++  +       V    P  S +PP     PP
Sbjct: 51  PEEIYPNPTVYNSVKFNGSEVKDLSILDANINDIQPVVPQMMPPASQFPPQQAQSPP 107

>YE45_SCHPO (O13965) Hypothetical protein C24C9.05c in chromosome I|
          Length = 730

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 100 PSNSKRIKSNLTTATKQLPKPPV 168
           PSN+++ +S    + +QLPKPPV
Sbjct: 434 PSNTQQSESTYEYSARQLPKPPV 456


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,168,085
Number of Sequences: 219361
Number of extensions: 1357308
Number of successful extensions: 3573
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3561
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)