Clone Name | rbastl04b04 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_469231.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2316 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 299 cctgctggagcgtcggaccggggtcatcacctcatcatcatccttgttctttttcttggc 358 ||||||||| || ||||| ||||| ||||| | |||||||||||||| | |||||||| Sbjct: 2283 cctgctggaacgccggactggggtggtcaccgcctcatcatccttgtttctcttcttggc 2224 Query: 359 agcgatcttctc 370 || ||||||||| Sbjct: 2223 agggatcttctc 2212
>dbj|AK061599.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A09, full insert sequence Length = 2801 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 299 cctgctggagcgtcggaccggggtcatcacctcatcatcatccttgttctttttcttggc 358 ||||||||| || ||||| ||||| ||||| | |||||||||||||| | |||||||| Sbjct: 2453 cctgctggaacgccggactggggtggtcaccgcctcatcatccttgtttctcttcttggc 2394 Query: 359 agcgatcttctc 370 || ||||||||| Sbjct: 2393 agggatcttctc 2382
>emb|CT025842.2| Medicago truncatula chromosome 5 clone mth2-54i22, COMPLETE SEQUENCE Length = 111922 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 agtttcaaaagcaatctcaaac 105 |||||||||||||||||||||| Sbjct: 18698 agtttcaaaagcaatctcaaac 18677
>gb|AC105966.11| Mus musculus chromosome 3, clone RP23-403H2, complete sequence Length = 201376 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 197607 tcatcatcatcctttttctttttct 197583
>ref|XM_517444.1| PREDICTED: Pan troglodytes similar to transcriptional coactivator tubedown-100 isoform 1; putative N-acetyltransferase; gastric cancer antigen Ga19 (LOC461495), mRNA Length = 552 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 145 tcatcatcatccttcttctttttct 121
>gb|AY112670.1| Homo sapiens transcriptional coactivator tubedown-100 (TBDN100) mRNA, complete cds Length = 2601 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 1895 tcatcatcatccttcttctttttct 1871
>ref|XM_874724.1| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 5 (LOC536676), mRNA Length = 5687 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2204 tcatcatcatccttcttctttttct 2180
>ref|XM_874639.1| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 4 (LOC536676), mRNA Length = 5648 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2219 tcatcatcatccttcttctttttct 2195
>ref|XM_874549.1| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 3 (LOC536676), mRNA Length = 5642 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2213 tcatcatcatccttcttctttttct 2189
>ref|XM_616817.2| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 1 (LOC536676), mRNA Length = 5638 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2204 tcatcatcatccttcttctttttct 2180
>ref|XM_864850.1| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 2 (LOC536676), mRNA Length = 6241 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2204 tcatcatcatccttcttctttttct 2180
>ref|NM_057175.3| Homo sapiens NMDA receptor regulated 1 (NARG1), mRNA Length = 5554 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2151 tcatcatcatccttcttctttttct 2127
>ref|XM_540937.2| PREDICTED: Canis familiaris similar to NMDA receptor regulated 1 (LOC483817), mRNA Length = 5449 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2030 tcatcatcatcctttttctttttct 2006
>gb|AF510858.1| Mus musculus N-terminal aceyltransferase 1 mRNA, complete cds Length = 4056 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2092 tcatcatcatcctttttctttttct 2068
>gb|BC030167.1| Mus musculus NMDA receptor-regulated gene 1, mRNA (cDNA clone IMAGE:3674167), complete cds Length = 2372 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 410 tcatcatcatcctttttctttttct 386
>gb|AY039242.1| Homo sapiens gastric cancer antigen Ga19 mRNA, complete cds Length = 3084 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2176 tcatcatcatccttcttctttttct 2152
>ref|NM_053089.2| Mus musculus NMDA receptor-regulated gene 1 (Narg1), mRNA Length = 4056 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2092 tcatcatcatcctttttctttttct 2068
>emb|CR861248.1| Pongo pygmaeus mRNA; cDNA DKFZp459P063 (from clone DKFZp459P063) Length = 4127 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2163 tcatcatcatccttcttctttttct 2139
>dbj|AK163846.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130079A18 product:unclassifiable, full insert sequence Length = 2319 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 486 tcatcatcatcctttttctttttct 462
>gb|BC050017.1| Mus musculus NMDA receptor-regulated gene 1, mRNA (cDNA clone MGC:60847 IMAGE:30020858), complete cds Length = 4060 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2093 tcatcatcatcctttttctttttct 2069
>gb|AF327722.1|AF327722 Homo sapiens putative acetyltransferase mRNA, complete cds Length = 4192 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2174 tcatcatcatccttcttctttttct 2150
>dbj|AB221683.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis, dev_stage=adult, strain=C57BL/6J), clone:V01Y048K13 Length = 2598 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 1895 tcatcatcatcctttttctttttct 1871
>gb|AC097376.3| Homo sapiens BAC clone RP11-83A24 from 4, complete sequence Length = 145395 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 76435 tcatcatcatccttcttctttttct 76411
>gb|BC093928.1| Homo sapiens NMDA receptor regulated 1, mRNA (cDNA clone MGC:120963 IMAGE:7939773), complete cds Length = 2739 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 1960 tcatcatcatccttcttctttttct 1936
>gb|AC108057.3| Homo sapiens BAC clone RP11-374N13 from 2, complete sequence Length = 127242 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 acatgtctgtctgtctaacaa 197 ||||||||||||||||||||| Sbjct: 117803 acatgtctgtctgtctaacaa 117783
>emb|AJ314788.1|HSA314788 Homo sapiens mRNA for putative N-acetyltransferase Length = 5505 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 2103 tcatcatcatccttcttctttttct 2079
>gb|BC104806.1| Homo sapiens NMDA receptor regulated 1, mRNA (cDNA clone MGC:132466 IMAGE:8143809), complete cds Length = 2739 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 1960 tcatcatcatccttcttctttttct 1936
>gb|AC102860.13| Mus musculus chromosome 3, clone RP24-511H12, complete sequence Length = 202315 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttct 354 |||||||||||||| |||||||||| Sbjct: 788 tcatcatcatcctttttctttttct 764
>gb|AC125688.6| Rattus norvegicus 20 BAC CH230-186I2 (Children's Hospital Oakland Research Institute) complete sequence Length = 209618 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tcaaacatgtctgtctgtct 192 |||||||||||||||||||| Sbjct: 66923 tcaaacatgtctgtctgtct 66904
>gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, complete sequence Length = 196560 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 163 tattttatcatcaaacatgtctgtctgt 190 |||||| ||||||||| ||||||||||| Sbjct: 39934 tattttctcatcaaacttgtctgtctgt 39907
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 165 ttttatcatcaaacatgtctgtctgtct 192 ||||||||| ||||||||||||||||| Sbjct: 38337 ttttatcattcaacatgtctgtctgtct 38310
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 299 cctgctggagcgtcggaccggggtcatcacctcatcatcatccttgtt 346 ||||||||| || ||||| ||||| ||||| | |||||||||||||| Sbjct: 26240356 cctgctggaacgccggactggggtggtcaccgcctcatcatccttgtt 26240403 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ctcaaaccacaaaaacaaat 118 |||||||||||||||||||| Sbjct: 11142817 ctcaaaccacaaaaacaaat 11142836
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 165 ttttatcatcaaacatgtctgtctgtct 192 ||||||||| ||||||||||||||||| Sbjct: 138162 ttttatcattcaacatgtctgtctgtct 138135
>emb|CR536619.20| Zebrafish DNA sequence from clone CH211-194H19 in linkage group 16, complete sequence Length = 179375 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aaaccacaaaaacaaatcct 121 |||||||||||||||||||| Sbjct: 73607 aaaccacaaaaacaaatcct 73626
>emb|AL589649.4| Human DNA sequence from clone RP11-264J13 on chromosome 6, complete sequence Length = 44768 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 atatgtagaacataacagcagaaa 158 |||||| ||||||||||||||||| Sbjct: 40501 atatgtggaacataacagcagaaa 40478
>emb|CR376765.12| Zebrafish DNA sequence from clone DKEY-208L2 in linkage group 13, complete sequence Length = 134448 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 tctcaatcagagaacaatacaagg 60 |||||||||||| ||||||||||| Sbjct: 24466 tctcaatcagagcacaatacaagg 24489
>emb|CR932968.2| Medicago truncatula chromosome 5 clone mth2-8e17, COMPLETE SEQUENCE Length = 128179 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gtcatcacctcatcatcatc 340 |||||||||||||||||||| Sbjct: 53861 gtcatcacctcatcatcatc 53880
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ctcaaaccacaaaaacaaat 118 |||||||||||||||||||| Sbjct: 56174 ctcaaaccacaaaaacaaat 56193
>emb|BX649403.4| Zebrafish DNA sequence from clone CH211-153M11 in linkage group 13, complete sequence Length = 170097 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tcaaaagcaatctcaaacca 107 |||||||||||||||||||| Sbjct: 132286 tcaaaagcaatctcaaacca 132267
>gb|AC008814.6| Homo sapiens chromosome 5 clone CTD-2117L12, complete sequence Length = 146671 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 tcatcatccttgttcttttt 352 |||||||||||||||||||| Sbjct: 89306 tcatcatccttgttcttttt 89325
>gb|AC026124.35| Homo sapiens 12 BAC RP11-305O6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181835 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gtcatcacctcatcatcatc 340 |||||||||||||||||||| Sbjct: 163349 gtcatcacctcatcatcatc 163368
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete sequence Length = 122939 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 299 cctgctggagcgtcggaccggggtcatcacctcatcatcatccttgtt 346 ||||||||| || ||||| ||||| ||||| | |||||||||||||| Sbjct: 69815 cctgctggaacgccggactggggtggtcaccgcctcatcatccttgtt 69862
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 165 ttttatcatcaaacatgtctgtctgtct 192 ||||||||| ||||||||||||||||| Sbjct: 16397727 ttttatcattcaacatgtctgtctgtct 16397700
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 atcatcatccttgttctttttctt 355 ||||||||||||||||||| |||| Sbjct: 26148388 atcatcatccttgttctttctctt 26148411
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 299 cctgctggagcgtcggaccggggtcatcacctcatcatcatccttgtt 346 ||||||||| || ||||| ||||| ||||| | |||||||||||||| Sbjct: 26331665 cctgctggaacgccggactggggtggtcaccgcctcatcatccttgtt 26331712 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ctcaaaccacaaaaacaaat 118 |||||||||||||||||||| Sbjct: 11139580 ctcaaaccacaaaaacaaat 11139599
>gb|AC116172.2| Homo sapiens BAC clone RP11-24L21 from 4, complete sequence Length = 86384 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 tcatcatccttgttcttttt 352 |||||||||||||||||||| Sbjct: 65014 tcatcatccttgttcttttt 65033
>gb|AC008176.3|AC008176 Homo sapiens BAC clone RP11-451F11 from 7p11.2-p21, complete sequence Length = 90180 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ctcaaaccacaaaaacaaat 118 |||||||||||||||||||| Sbjct: 52725 ctcaaaccacaaaaacaaat 52706
>gb|AF237622.1|AF237622 Mus musculus acetyltransferase Tubedown-1 mRNA, complete cds Length = 3421 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 tcatcatcatccttgttctttttc 353 |||||||||||||| ||||||||| Sbjct: 1486 tcatcatcatcctttttctttttc 1463
>emb|BX296535.7| Zebrafish DNA sequence from clone CH211-234I2, complete sequence Length = 163120 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaaccacaaaaacaaatcct 121 |||||||||||||||||||| Sbjct: 77841 aaaccacaaaaacaaatcct 77822
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 atcatcatccttgttctttttctt 355 ||||||||||||||||||| |||| Sbjct: 92319 atcatcatccttgttctttctctt 92342
>gb|AC090673.5| Homo sapiens 12 BAC RP11-366L20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178755 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tttcaaaagcaatctcaaac 105 |||||||||||||||||||| Sbjct: 83086 tttcaaaagcaatctcaaac 83105
>emb|CT009602.4| PTB-121B21, complete sequence Length = 236109 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ctagccactagtcaaatatg 139 |||||||||||||||||||| Sbjct: 235222 ctagccactagtcaaatatg 235203
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 165 ttttatcatcaaacatgtctgtctgtct 192 ||||||||| ||||||||||||||||| Sbjct: 16488742 ttttatcattcaacatgtctgtctgtct 16488715
>gb|AC134918.5| Mus musculus BAC clone RP23-71G16 from 3, complete sequence Length = 191764 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 caaaccacaaaaacaaatcctagc 124 ||||||||||||||||| |||||| Sbjct: 183460 caaaccacaaaaacaaagcctagc 183483
>gb|AC138720.5| Mus musculus BAC clone RP23-192O12 from chromosome 3, complete sequence Length = 191825 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 caaaccacaaaaacaaatcctagc 124 ||||||||||||||||| |||||| Sbjct: 158125 caaaccacaaaaacaaagcctagc 158102
>emb|AL391155.3|CNS06C81 Human chromosome 14 DNA sequence BAC R-559M6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 160550 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 ctacgagtcaggtgccctgaatgg 244 ||||||||||||||||||| |||| Sbjct: 45921 ctacgagtcaggtgccctggatgg 45898
>gb|AF326972.1| Homo sapiens high-mobility group protein isoform C (HMGIC) gene, intron 3 and partial cds Length = 112930 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tttcaaaagcaatctcaaac 105 |||||||||||||||||||| Sbjct: 97323 tttcaaaagcaatctcaaac 97342 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,490,246 Number of Sequences: 3902068 Number of extensions: 5490246 Number of successful extensions: 119792 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119473 Number of HSP's gapped (non-prelim): 319 length of query: 458 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 436 effective length of database: 17,147,199,772 effective search space: 7476179100592 effective search space used: 7476179100592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)