>VPR_HV2G1 (P18046) VPR protein (R ORF protein)|
          Length = 105

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 105 TNYTPESGKAKEVTGGDLKFFFLCMVHRKTLRSF--RMIIHMGSGSNSRNGN 254
           T + PE G  +   GGD     L  +  + L+ F  R++I +G+  +SR+G+
Sbjct: 6   TEFPPEDGTPRRELGGDWVIRILGEIKEEALKHFDPRLLIALGNYIHSRHGD 57

>PSD3_CAEEL (Q04908) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit rpn-3)
          Length = 504

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +3

Query: 165 FFLCMVHRKTLRSFRMIIHMGSGSNSRNGNYQL*INHQKEASLICWLLLHY 317
           +FLC+++    R  R+  H G   NSR     L    + +A LICWLL  Y
Sbjct: 180 YFLCVIYE---REGRLFDHQGF-LNSRLRTATLRNFSESQAVLICWLLRCY 226

>MASS1_MOUSE (Q8VHN7) Monogenic audiogenic seizure susceptibility protein 1|
           precursor (Very large G-protein coupled receptor 1)
           (Neurepin)
          Length = 6298

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 182 TQENVTIFQDDHPHGVGVQLKKWQLSTIDKSSKG 283
           T  N+TI ++D+PHG+ ++     LS   K SKG
Sbjct: 875 TLVNITILKNDYPHGI-IEFVSDGLSASIKESKG 907

>STE20_CANAL (Q92212) Serine/threonine-protein kinase STE20 homolog (EC|
           2.7.11.1)
          Length = 1230

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 20/67 (29%), Positives = 33/67 (49%)
 Frame = +3

Query: 63  SSFQSKEGL*NSSNTNYTPESGKAKEVTGGDLKFFFLCMVHRKTLRSFRMIIHMGSGSNS 242
           +S  S E L    N+N +P+SGK K  +G  ++  F  M  +    S     + GS S+S
Sbjct: 410 NSLSSLEPLGVGINSNSSPKSGK-KRKSGSKVRGVFSSMFGKNKSTSSSSSSNSGSNSHS 468

Query: 243 RNGNYQL 263
           +  N ++
Sbjct: 469 QEVNIKI 475

>TRYT_DROER (P54628) Trypsin theta precursor (EC 3.4.21.4)|
          Length = 262

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 114 TPESGKAKEVTGGDLKFFFLCMVHRKTLRS 203
           TP +G    VTG   K +F CM   KTL++
Sbjct: 146 TPPTGTTAVVTGWGSKCYFWCMTLPKTLQA 175


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,963,998
Number of Sequences: 219361
Number of extensions: 993604
Number of successful extensions: 1774
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)