Clone Name | rbastl04a07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 141 bits (71), Expect = 1e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 155 aggtaggaccccagccgcaggatgtcgcaaaaaacccctccggcagtcacctccgcgccc 214 ||||||||| ||||||||||||||||||| || || || ||||| || ||||||||||| Sbjct: 6941170 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 6941229 Query: 215 gcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaagtggtgaaggcggtg 274 ||||| || || ||||||||||| |||||||||||||||||| | |||||||||||| || Sbjct: 6941230 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 6941289 Query: 275 atgttgtcgga 285 ||||||||||| Sbjct: 6941290 atgttgtcgga 6941300
>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0044K01 Length = 160643 Score = 141 bits (71), Expect = 1e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 155 aggtaggaccccagccgcaggatgtcgcaaaaaacccctccggcagtcacctccgcgccc 214 ||||||||| ||||||||||||||||||| || || || ||||| || ||||||||||| Sbjct: 12341 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 12400 Query: 215 gcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaagtggtgaaggcggtg 274 ||||| || || ||||||||||| |||||||||||||||||| | |||||||||||| || Sbjct: 12401 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 12460 Query: 275 atgttgtcgga 285 ||||||||||| Sbjct: 12461 atgttgtcgga 12471
>dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146N15, full insert sequence Length = 3120 Score = 141 bits (71), Expect = 1e-30 Identities = 116/131 (88%) Strand = Plus / Minus Query: 155 aggtaggaccccagccgcaggatgtcgcaaaaaacccctccggcagtcacctccgcgccc 214 ||||||||| ||||||||||||||||||| || || || ||||| || ||||||||||| Sbjct: 2817 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 2758 Query: 215 gcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaagtggtgaaggcggtg 274 ||||| || || ||||||||||| |||||||||||||||||| | |||||||||||| || Sbjct: 2757 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 2698 Query: 275 atgttgtcgga 285 ||||||||||| Sbjct: 2697 atgttgtcgga 2687
>dbj|AK066685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071M24, full insert sequence Length = 2328 Score = 141 bits (71), Expect = 1e-30 Identities = 116/131 (88%) Strand = Plus / Minus Query: 155 aggtaggaccccagccgcaggatgtcgcaaaaaacccctccggcagtcacctccgcgccc 214 ||||||||| ||||||||||||||||||| || || || ||||| || ||||||||||| Sbjct: 2034 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 1975 Query: 215 gcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaagtggtgaaggcggtg 274 ||||| || || ||||||||||| |||||||||||||||||| | |||||||||||| || Sbjct: 1974 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 1915 Query: 275 atgttgtcgga 285 ||||||||||| Sbjct: 1914 atgttgtcgga 1904
>gb|AY107504.1| Zea mays PCO076481 mRNA sequence Length = 832 Score = 141 bits (71), Expect = 1e-30 Identities = 116/131 (88%) Strand = Plus / Minus Query: 155 aggtaggaccccagccgcaggatgtcgcaaaaaacccctccggcagtcacctccgcgccc 214 ||||| ||| ||||||||||||||||||| || || || || |||||||||||||||||| Sbjct: 573 aggtaagacgccagccgcaggatgtcgcagaagacgccacccgcagtcacctccgcgccc 514 Query: 215 gcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaagtggtgaaggcggtg 274 |||||||| || |||||||| || |||||||||||||||||| | |||||||| ||| || Sbjct: 513 gcgcctgggccccgcacgattagcggctgctccttgtacctcgaggtggtgaatgcgatg 454 Query: 275 atgttgtcgga 285 ||||||||||| Sbjct: 453 atgttgtcgga 443
>dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine dehydrogenase, complete cds Length = 3061 Score = 141 bits (71), Expect = 1e-30 Identities = 116/131 (88%) Strand = Plus / Minus Query: 155 aggtaggaccccagccgcaggatgtcgcaaaaaacccctccggcagtcacctccgcgccc 214 ||||||||| ||||||||||||||||||| || || || ||||| || ||||||||||| Sbjct: 2784 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 2725 Query: 215 gcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaagtggtgaaggcggtg 274 ||||| || || ||||||||||| |||||||||||||||||| | |||||||||||| || Sbjct: 2724 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 2665 Query: 275 atgttgtcgga 285 ||||||||||| Sbjct: 2664 atgttgtcgga 2654
>gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-homoserine dehydrogenase mRNA, complete cds Length = 3045 Score = 123 bits (62), Expect = 3e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 152 ccgaggtaggaccccagccgcaggatgtcgcaaaaaacccctccggcagtcacctccgcg 211 |||||||| ||| |||||||||| |||||||| || || || ||||| |||||||||||| Sbjct: 2784 ccgaggtaagacgccagccgcagaatgtcgcagaagacgccaccggctgtcacctccgcg 2725 Query: 212 cccgcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaagtggtgaaggcg 271 || || || || || ||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 2724 ccggcacccggaccccgcacgatcagcggctgctccttgtacctggacgtggtgaaggcg 2665 Query: 272 gtgatgttgtcgga 285 ||||||||||||| Sbjct: 2664 atgatgttgtcgga 2651
>gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-homoserine dehydrogenase mRNA, complete cds Length = 3178 Score = 103 bits (52), Expect = 3e-19 Identities = 133/160 (83%) Strand = Plus / Minus Query: 143 gagggggccccgaggtaggaccccagccgcaggatgtcgcaaaaaacccctccggcagtc 202 |||||||| || |||||||| ||| ||||| |||||||| || || ||||| |||||| Sbjct: 2800 gagggggcaccaaggtaggaagacaggcgcagtatgtcgcagaagacgcctcctgcagtc 2741 Query: 203 acctccgcgcccgcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaagtg 262 || ||||| || || || || || ||||||||||| ||||| |||||||||||| | ||| Sbjct: 2740 acttccgcaccagcccccggaccacgcacgatcagtggctgatccttgtacctcgaggtg 2681 Query: 263 gtgaaggcggtgatgttgtcggatccaaatagctgagcga 302 |||||||| ||||||||||||| ||| ||||||| |||| Sbjct: 2680 gtgaaggctatgatgttgtcggaaccagatagctgcgcga 2641
>gb|AY111528.1| Zea mays CL2353_1 mRNA sequence Length = 3153 Score = 97.6 bits (49), Expect = 2e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 170 cgcaggatgtcgcaaaaaacccctccggcagtcacctccgcgcccgcgcctggcccgcgc 229 ||||| |||||||| || || ||||| |||||||| ||||| || || || || || ||| Sbjct: 2773 cgcagtatgtcgcagaagacgcctcctgcagtcacttccgcaccagccccgggacctcgc 2714 Query: 230 acgatcaggggctgctccttgtacctcaaagtggtgaaggcggtgatgttgtcggatcca 289 |||||||| ||||| |||||||||||| | ||||||||||| ||||||||||||| ||| Sbjct: 2713 acgatcagtggctgatccttgtacctcgaggtggtgaaggctatgatgttgtcggaacca 2654 Query: 290 aatagctgagcga 302 ||||||| |||| Sbjct: 2653 gatagctgcgcga 2641
>ref|XM_481775.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2766 Score = 77.8 bits (39), Expect = 2e-11 Identities = 132/163 (80%) Strand = Plus / Minus Query: 140 tatgagggggccccgaggtaggaccccagccgcaggatgtcgcaaaaaacccctccggca 199 |||||||| || || |||||||| ||||||| || ||||| | || || ||||| || Sbjct: 2765 tatgagggagcgcctaggtaggaggccagccgtagtatgtcactgaagacacctcctgcg 2706 Query: 200 gtcacctccgcgcccgcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaa 259 |||||||| || || ||||| || || ||||||||||| || ||||||||||| || | Sbjct: 2705 gtcacctctgcaccggcgcccgggcctcgcacgatcagcggttgctccttgtatcttgac 2646 Query: 260 gtggtgaaggcggtgatgttgtcggatccaaatagctgagcga 302 || ||||||||| ||||||||||||| ||| ||||||| |||| Sbjct: 2645 gtcgtgaaggcgatgatgttgtcggagccagatagctgcgcga 2603
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 77.8 bits (39), Expect = 2e-11 Identities = 132/163 (80%) Strand = Plus / Plus Query: 140 tatgagggggccccgaggtaggaccccagccgcaggatgtcgcaaaaaacccctccggca 199 |||||||| || || |||||||| ||||||| || ||||| | || || ||||| || Sbjct: 15432425 tatgagggagcgcctaggtaggaggccagccgtagtatgtcactgaagacacctcctgcg 15432484 Query: 200 gtcacctccgcgcccgcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaa 259 |||||||| || || ||||| || || ||||||||||| || ||||||||||| || | Sbjct: 15432485 gtcacctctgcaccggcgcccgggcctcgcacgatcagcggttgctccttgtatcttgac 15432544 Query: 260 gtggtgaaggcggtgatgttgtcggatccaaatagctgagcga 302 || ||||||||| ||||||||||||| ||| ||||||| |||| Sbjct: 15432545 gtcgtgaaggcgatgatgttgtcggagccagatagctgcgcga 15432587
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 77.8 bits (39), Expect = 2e-11 Identities = 132/163 (80%) Strand = Plus / Plus Query: 140 tatgagggggccccgaggtaggaccccagccgcaggatgtcgcaaaaaacccctccggca 199 |||||||| || || |||||||| ||||||| || ||||| | || || ||||| || Sbjct: 118001 tatgagggagcgcctaggtaggaggccagccgtagtatgtcactgaagacacctcctgcg 118060 Query: 200 gtcacctccgcgcccgcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaa 259 |||||||| || || ||||| || || ||||||||||| || ||||||||||| || | Sbjct: 118061 gtcacctctgcaccggcgcccgggcctcgcacgatcagcggttgctccttgtatcttgac 118120 Query: 260 gtggtgaaggcggtgatgttgtcggatccaaatagctgagcga 302 || ||||||||| ||||||||||||| ||| ||||||| |||| Sbjct: 118121 gtcgtgaaggcgatgatgttgtcggagccagatagctgcgcga 118163
>gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence Length = 3045 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 234 tcaggggctgctccttgtacctcaaagtggtgaaggcggtgatgttgtcgga 285 |||| ||||||||||||||||| | |||||||||||| ||||||||||||| Sbjct: 2702 tcagcggctgctccttgtacctggacgtggtgaaggcgatgatgttgtcgga 2651
>dbj|AK073790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067A07, full insert sequence Length = 2472 Score = 61.9 bits (31), Expect = 1e-06 Identities = 131/163 (80%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 140 tatgagggggccccgaggtaggaccccagccgcaggatgtcgcaaaaaacccctccggca 199 |||||||| || || |||||||| ||||||| || ||||| | || || ||||| || Sbjct: 2289 tatgagggagcgcctaggtaggaggccagccgtagtatgtcactgaagacacctcctgcg 2230 Query: 200 gtcacctccgcgcccgcgcctggcccgcgcacgatcaggggctgctccttgtacctcaaa 259 |||||||| || || ||||| || || ||| ||||||| || ||||||||||| || | Sbjct: 2229 gtcacctctgcaccggcgcccgggcctcgc-cgatcagcggttgctccttgtatcttgac 2171 Query: 260 gtggtgaaggcggtgatgttgtcggatccaaatagctgagcga 302 || ||||||||| ||||||||||||| ||| ||||||| |||| Sbjct: 2170 gtcgtgaaggcgatgatgttgtcggagccagatagctgcgcga 2128
>gb|AC152414.7| Mus musculus BAC clone RP23-358O14 from chromosome 10, complete sequence Length = 230322 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 gcaagtattcaaaacaaaagac 57 |||||||||||||||||||||| Sbjct: 19549 gcaagtattcaaaacaaaagac 19528
>gb|AC152411.5| Mus musculus BAC clone RP24-87M19 from chromosome 10, complete sequence Length = 204973 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 gcaagtattcaaaacaaaagac 57 |||||||||||||||||||||| Sbjct: 80890 gcaagtattcaaaacaaaagac 80911
>gb|AC096675.2| Homo sapiens chromosome 1 clone RP11-80N9, complete sequence Length = 170467 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatttgct 29 ||||||||||||||||||| |||||| Sbjct: 74759 aaacaaaacaaaacattttctttgct 74734
>gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosome 17, complete sequence Length = 245262 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatt 25 |||||||||||||||||||||| Sbjct: 77727 aaacaaaacaaaacattttatt 77706
>emb|BX649419.6| Zebrafish DNA sequence from clone CH211-106J5 in linkage group 22, complete sequence Length = 172908 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcaaacaaaacaaaacatttt 22 |||||||||||||||||||||| Sbjct: 20248 ggcaaacaaaacaaaacatttt 20227
>emb|AL935168.11| Mouse DNA sequence from clone RP23-337M17 on chromosome 2, complete sequence Length = 181602 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatt 25 |||||||||||||||||||||| Sbjct: 58095 aaacaaaacaaaacattttatt 58074
>gb|AC160994.5| Mus musculus BAC clone RP23-101K11 from chromosome 17, complete sequence Length = 199856 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatt 25 |||||||||||||||||||||| Sbjct: 173356 aaacaaaacaaaacattttatt 173335
>gb|AC158499.5| Mus musculus chromosome 18, clone RP23-466O5, complete sequence Length = 164645 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttat 24 ||||||||||||||||||||| Sbjct: 13029 aaacaaaacaaaacattttat 13009
>gb|AY090554.1| Microtus kirgisorum HMG14, HL30, MKK2 pseudogenes, complete sequences; and xist gene, complete sequence Length = 37042 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 caaaacaaaacattttatttg 27 ||||||||||||||||||||| Sbjct: 36543 caaaacaaaacattttatttg 36523
>gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, complete sequence Length = 175586 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gcaaacaaaacaaaacatttt 22 ||||||||||||||||||||| Sbjct: 155024 gcaaacaaaacaaaacatttt 155044
>gb|AC102497.7| Mus musculus chromosome 18, clone RP24-570C15, complete sequence Length = 165977 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttat 24 ||||||||||||||||||||| Sbjct: 128476 aaacaaaacaaaacattttat 128456
>gb|AC136513.2| Mus musculus BAC clone RP23-477N9 from chromosome 5, complete sequence Length = 188517 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caaacaaaacaaaacatttta 23 ||||||||||||||||||||| Sbjct: 161699 caaacaaaacaaaacatttta 161719 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caaacaaaacaaaacatttta 23 ||||||||||||||||||||| Sbjct: 160417 caaacaaaacaaaacatttta 160437
>ref|XM_544270.2| PREDICTED: Canis familiaris similar to F-box only protein, helicase, 18 isoform 1 (LOC487142), mRNA Length = 4353 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttat 24 ||||||||||||||||||||| Sbjct: 3813 aaacaaaacaaaacattttat 3833
>emb|AL138836.15| Human DNA sequence from clone RP11-88M19 on chromosome 9 Contains the 5' end of the CDK5RAP2 gene for CDK5 regulatory subunit associated protein 2 (C48), the EGFL5 gene for EGF-like-domain, multiple 5 (MEGF9), an S-adenosylhomocysteine hydrolase (AHCY) pseudogene, the 3' end of a variant of the FBXW2 gene for F-box and WD-40 domain protein 2 (FBW2) and a CpG island, complete sequence Length = 188481 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttat 24 ||||||||||||||||||||| Sbjct: 49835 aaacaaaacaaaacattttat 49855
>gb|AC094019.2| Homo sapiens chromosome 3 clone RP11-345J6, complete sequence Length = 198146 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gcaaacaaaacaaaacatttt 22 ||||||||||||||||||||| Sbjct: 180651 gcaaacaaaacaaaacatttt 180631
>gb|AC112213.2| Homo sapiens chromosome 3 clone RP11-223D18, complete sequence Length = 144201 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttgctttcctcg 36 ||||||| |||||||||||||| ||||||||| Sbjct: 90449 aaacaaattaaaacattttatttcctttcctcg 90481
>gb|AC097639.2| Homo sapiens chromosome 3 clone RP11-384L8, complete sequence Length = 177384 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gcaaacaaaacaaaacatttt 22 ||||||||||||||||||||| Sbjct: 44890 gcaaacaaaacaaaacatttt 44870
>gb|AC012410.10| Homo sapiens chromosome 8, clone RP11-354A3, complete sequence Length = 220715 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aacaaaacaaaacattttatt 25 ||||||||||||||||||||| Sbjct: 58217 aacaaaacaaaacattttatt 58197
>emb|CR387309.1| Gallus gallus finished cDNA, clone ChEST350k16 Length = 1330 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 aaagtggtgaaggcggtgatg 277 ||||||||||||||||||||| Sbjct: 1058 aaagtggtgaaggcggtgatg 1078
>gb|AC016080.5|AC016080 Homo sapiens, clone RP11-23N14, complete sequence Length = 176921 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aacaaaacaaaacattttatt 25 ||||||||||||||||||||| Sbjct: 141577 aacaaaacaaaacattttatt 141597
>emb|BX088562.12| Zebrafish DNA sequence from clone CH211-286C4 in linkage group 25, complete sequence Length = 138646 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aacaaaacaaaacattttatt 25 ||||||||||||||||||||| Sbjct: 68982 aacaaaacaaaacattttatt 68962
>gb|AC157488.1| Medicago truncatula chromosome 2 BAC clone mte1-33n12, complete sequence Length = 93219 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 caaaacaaaacattttatttg 27 ||||||||||||||||||||| Sbjct: 62709 caaaacaaaacattttatttg 62729
>emb|AJ310130.1|MRO310130 Microtus rossiaemeridionalis 33kb genomic sequence encoding Xist gene, complete sequence Length = 33026 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 caaaacaaaacattttatttg 27 ||||||||||||||||||||| Sbjct: 32943 caaaacaaaacattttatttg 32923
>emb|AJ310129.1|MAR310129 Microtus arvalis 31kb genomic sequence encoding Xist gene, complete sequence Length = 31277 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 caaaacaaaacattttatttg 27 ||||||||||||||||||||| Sbjct: 30402 caaaacaaaacattttatttg 30382
>gb|AC160999.3| Mus musculus BAC clone RP23-58I16 from chromosome 14, complete sequence Length = 222122 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatttgc 28 ||||||||||||||||| ||||||| Sbjct: 90386 aaacaaaacaaaacattgtatttgc 90362
>gb|L12469.1|CHKMAX Gallus gallus (max) gene, complete cds Length = 5698 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 aaagtggtgaaggcggtgatg 277 ||||||||||||||||||||| Sbjct: 5529 aaagtggtgaaggcggtgatg 5509
>gb|AC145507.3| Dasypus novemcinctus clone VMRC5-137J5, complete sequence Length = 109381 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 caaacaaaacaaaacatttt 22 |||||||||||||||||||| Sbjct: 83544 caaacaaaacaaaacatttt 83525
>ref|NM_033610.2| Mus musculus synuclein, beta (Sncb), mRNA Length = 1210 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 1007 aaacaaaacaaaacatttta 988
>gb|AC104196.8| Mus musculus chromosome 5, clone RP24-239K15, complete sequence Length = 160345 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 10798 aaacaaaacaaaacatttta 10779
>gb|AC139324.4| Mus musculus chromosome 18 clone RP24-393N23, complete sequence Length = 180267 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gcaaacaaaacaaaacattt 21 |||||||||||||||||||| Sbjct: 108530 gcaaacaaaacaaaacattt 108549
>gb|BC046823.1| Mus musculus cyclin-dependent kinase 5, regulatory subunit (p35) 1, mRNA (cDNA clone MGC:61249 IMAGE:6400348), complete cds Length = 4151 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3247 aaacaaaacaaaacattttttttg 3270
>gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete sequence Length = 186286 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 caaacaaaacaaaacatttt 22 |||||||||||||||||||| Sbjct: 118921 caaacaaaacaaaacatttt 118902
>gb|AC161409.11| Mus musculus chromosome 7, clone RP23-292B24, complete sequence Length = 185365 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 156600 aaacaaaacaaaacattttttttg 156577
>gb|AC136730.9| Mus musculus chromosome 19, clone RP23-76E22, complete sequence Length = 146616 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 caaacaaaacaaaacatttt 22 |||||||||||||||||||| Sbjct: 94538 caaacaaaacaaaacatttt 94519
>gb|AC140426.3| Mus musculus BAC clone RP24-98A17 from chromosome 14, complete sequence Length = 189282 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caaaacaaaacattttattt 26 |||||||||||||||||||| Sbjct: 12568 caaaacaaaacattttattt 12587
>ref|NM_009871.2| Mus musculus cyclin-dependent kinase 5, regulatory subunit (p35) 1 (Cdk5r1), mRNA Length = 4166 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3262 aaacaaaacaaaacattttttttg 3285
>gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, complete sequence Length = 179212 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 174129 aaacaaaacaaaacatttta 174110 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 173139 aaacaaaacaaaacatttta 173120
>ref|NM_001009554.1| Homo sapiens microfibrillar-associated protein 3-like (MFAP3L), transcript variant 2, mRNA Length = 1961 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 atcaggggctgctccttgta 252 |||||||||||||||||||| Sbjct: 1074 atcaggggctgctccttgta 1093
>gb|AC138737.10| Mus musculus chromosome 5, clone RP23-307F20, complete sequence Length = 216064 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||||||| ||||| Sbjct: 107247 aaacaaaacaaaacatttaatttg 107270
>gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, complete sequence Length = 167687 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 59882 aaacaaaacaaaacatttta 59901 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 58892 aaacaaaacaaaacatttta 58911
>ref|XM_534551.2| PREDICTED: Canis familiaris similar to Microfibrillar-associated protein 3-like precursor (Protein kinase NYD-sp9) (HSD-39) (LOC477356), mRNA Length = 1694 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 atcaggggctgctccttgta 252 |||||||||||||||||||| Sbjct: 1333 atcaggggctgctccttgta 1352
>emb|CT025652.7| Mouse DNA sequence from clone RP24-68J3 on chromosome 17, complete sequence Length = 226856 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 32619 aaacaaaacaaaacatttta 32638
>emb|CT009518.6| Mouse DNA sequence from clone RP23-118M14 on chromosome 13, complete sequence Length = 221250 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||| ||||||||| Sbjct: 115111 aaacaaaacaaaactttttatttg 115088
>emb|CT010441.11| Mouse DNA sequence from clone CH29-521N19 on chromosome 17, complete sequence Length = 235642 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 136517 aaacaaaacaaaacatttta 136536
>gb|AC125073.4| Mus musculus BAC clone RP23-463H17 from chromosome 5, complete sequence Length = 164030 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||| ||||||||| Sbjct: 21755 aaacaaaacaaaaccttttatttg 21778
>gb|AC134842.3| Mus musculus BAC clone RP24-375P18 from chromosome 14, complete sequence Length = 154676 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caaaacaaaacattttattt 26 |||||||||||||||||||| Sbjct: 141631 caaaacaaaacattttattt 141650
>gb|AC132452.3| Mus musculus BAC clone RP23-195K10 from chromosome 19, complete sequence Length = 218688 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 70869 aaacaaaacaaaacatttta 70888
>gb|AC124389.4| Mus musculus BAC clone RP24-429G21 from chromosome 1, complete sequence Length = 183428 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 109596 aaacaaaacaaaacatttta 109577
>gb|AC121929.2| Mus musculus BAC clone RP24-204J10 from 5, complete sequence Length = 143840 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||| ||||||||| Sbjct: 11992 aaacaaaacaaaaccttttatttg 11969
>gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete sequence Length = 214995 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||||||| ||||| Sbjct: 26764 aaacaaaacaaaacatttaatttg 26741
>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence Length = 198281 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||||||| ||||| Sbjct: 66834 aaacaaaacaaaacatttaatttg 66857
>gb|U29082.1| Caenorhabditis elegans cosmid C14F5, complete sequence Length = 42966 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 6334 aaacaaaacaaaacatttta 6353
>gb|AY326055.1| Hyla picturata KU 202737 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 2337 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 acaaaacaaaacattttatt 25 |||||||||||||||||||| Sbjct: 1037 acaaaacaaaacattttatt 1056
>gb|AC163221.4| Mus musculus chromosome 19, clone RP23-376A6, complete sequence Length = 188740 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 caaacaaaacaaaacatttt 22 |||||||||||||||||||| Sbjct: 159034 caaacaaaacaaaacatttt 159015
>gb|AC161037.3| Mus musculus chromosome 7, clone RP24-255H18, complete sequence Length = 184362 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 134053 aaacaaaacaaaacattttttttg 134076
>emb|AL139141.23| Human DNA sequence from clone RP5-1180C10 on chromosome 1q24.1-24.3 Contains the LHX4 gene for LIM homeobox 4, a novel gene (FLJ38931), the 3' end of the ACBD6 gene for acyl-Coenzyme A binding domain containing 6 and a CpG island, complete sequence Length = 113808 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||| ||||||||| Sbjct: 64742 aaacaaaacaaaaccttttatttg 64719
>emb|AL035258.10|HS1097P24 Human DNA sequence from clone RP5-1097P24 on chromosome 20p11.21-12.3 Contains a putative novel gene, ESTs, STSs and GSSs, complete sequence Length = 133072 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gcaaacaaaacaaaacattt 21 |||||||||||||||||||| Sbjct: 118870 gcaaacaaaacaaaacattt 118851
>gb|BC066912.1| Homo sapiens microfibrillar-associated protein 3-like, transcript variant 2, mRNA (cDNA clone MGC:87101 IMAGE:5268480), complete cds Length = 1950 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 atcaggggctgctccttgta 252 |||||||||||||||||||| Sbjct: 1057 atcaggggctgctccttgta 1076
>gb|AF327560.1| Homo sapiens protein kinase NYD-sp9 mRNA, complete cds Length = 1961 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 atcaggggctgctccttgta 252 |||||||||||||||||||| Sbjct: 1074 atcaggggctgctccttgta 1093
>emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chromosome 11 Contains the 3' end of the Myo1d gene for myosin ID, two novel genes, the Cdk5r gene for cyclin-dependent kinase 5 regulatory subunit (p35), the Psmd11 gene for non-ATPase proteasome (prosome, macropain) 26S subunit 11, the Zfp207 gene for zinc finger protein 207 and the 3' end of the Rhbdl4 gene for rhomboid veinlet-like 4 (Drosophila), complete sequence Length = 195208 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 147814 aaacaaaacaaaacattttttttg 147837
>emb|AL590146.2| Zebrafish DNA sequence from clone RP71-20I5 in linkage group 9 Contains a gene for a novel protein similar to human FLJ20730 protein, a gene for a novel protein similar to rat steroid sensitive gene-1 protein (SSG-1), a gene for a novel protein similar to vertebrate coagulation factor V and VIII, a gene for a novel protein similar to human G-protein coupled receptor RE2, a gene for a novel transcript and a CpG island, complete sequence Length = 121086 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 24817 aaacaaaacaaaacatttta 24798
>emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in linkage group 2, complete sequence Length = 200950 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 2687 aaacaaaacaaaacatttta 2706
>gb|BC019409.1| Mus musculus synuclein, beta, mRNA (cDNA clone MGC:30287 IMAGE:4482283), complete cds Length = 1210 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 1007 aaacaaaacaaaacatttta 988
>gb|AC097498.3| Homo sapiens BAC clone RP11-326N15 from 4, complete sequence Length = 144511 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 59354 aaacaaaacaaaacatttta 59335
>dbj|AK142868.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930033H14 product:cyclin-dependent kinase 5, regulatory subunit (p35), full insert sequence Length = 4163 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3289 aaacaaaacaaaacattttttttg 3312
>dbj|AK141549.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630019O18 product:cyclin-dependent kinase 5, regulatory subunit (p35), full insert sequence Length = 3603 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3275 aaacaaaacaaaacattttttttg 3298
>gb|AC104306.2| Homo sapiens chromosome 3 clone RP11-524O15, complete sequence Length = 197110 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttgcttt 31 ||||||||||||||||||| ||| |||| Sbjct: 22530 aaacaaaacaaaacattttcttttcttt 22557
>gb|AC022867.10| Homo sapiens chromosome 8, clone RP11-367C12, complete sequence Length = 196931 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 caaaacaaaacattttatttgctt 30 |||||||| ||||||||||||||| Sbjct: 70658 caaaacaacacattttatttgctt 70635
>dbj|AK169667.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005M12 product:cyclin-dependent kinase 5, regulatory subunit (p35), full insert sequence Length = 4141 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3265 aaacaaaacaaaacattttttttg 3288
>dbj|AB179046.1| Macaca fascicularis testis cDNA clone: QtsA-12136, similar to human KIAA0626 gene product (KIAA0626), mRNA, RefSeq: XM_376355.1 Length = 2105 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 atcaggggctgctccttgta 252 |||||||||||||||||||| Sbjct: 1161 atcaggggctgctccttgta 1180
>gb|S82819.1| Mus musculus cyclin-dependent kinase 5 regulatory subunit p35 (Cdk5r) gene, complete cds Length = 5528 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 4107 aaacaaaacaaaacattttttttg 4130
>dbj|AK043203.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730069D02 product:CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1 PRECURSOR (CDK5 ACTIVATOR 1) (CYCLIN-DEPENDENT KINASE 5 REGULATORY SUBUNIT 1) (TAU PROTEIN KINASE II 23 KDA SUBUNIT) (TPKII REGULATORY SUBUNIT) (P23) (P25) (P35) homolog [Mus musculus], full insert sequence Length = 3485 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3238 aaacaaaacaaaacattttttttg 3261
>emb|BX323593.12| Zebrafish DNA sequence from clone DKEY-107I18 in linkage group 14, complete sequence Length = 198776 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 47811 aaacaaaacaaaacatttta 47830
>dbj|AK084003.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130075I24 product:CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1 PRECURSOR (CDK5 ACTIVATOR 1) (CYCLIN-DEPENDENT KINASE 5 REGULATORY SUBUNIT 1) (TAU PROTEIN KINASE II 23 KDA SUBUNIT) (TPKII REGULATORY SUBUNIT) (P23) (P25) (P35) homolog [Mus musculus], full insert sequence Length = 3949 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3240 aaacaaaacaaaacattttttttg 3263
>dbj|AK002613.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610012K10 product:ribosomal protein L10A, full insert sequence Length = 1618 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 1146 aaacaaaacaaaacatttta 1127
>dbj|AK079557.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230069H19 product:CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1 PRECURSOR (CDK5 ACTIVATOR 1) (CYCLIN-DEPENDENT KINASE 5 REGULATORY SUBUNIT 1) (TAU PROTEIN KINASE II 23 KDA SUBUNIT) (TPKII REGULATORY SUBUNIT) (P23) (P25) (P35), full insert sequence Length = 3483 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3266 aaacaaaacaaaacattttttttg 3289
>dbj|AK039999.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430041K03 product:cyclin-dependent kinase 5, regulatory subunit (p35), full insert sequence Length = 3273 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3054 aaacaaaacaaaacattttttttg 3077
>dbj|AK048617.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130088D23 product:CYCLIN DEPENDENT KINASE 5 REGULATORY SUBUNIT homolog [Mus musculus], full insert sequence Length = 3489 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3242 aaacaaaacaaaacattttttttg 3265
>gb|AC084866.5| Homo sapiens BAC clone RP11-6E9 from 4, complete sequence Length = 196852 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 atcaggggctgctccttgta 252 |||||||||||||||||||| Sbjct: 68187 atcaggggctgctccttgta 68168
>gb|AC093393.3| Homo sapiens BAC clone RP11-816B18 from 2, complete sequence Length = 120450 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 acaaaacattttatttgctt 30 |||||||||||||||||||| Sbjct: 60234 acaaaacattttatttgctt 60215
>gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186864 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 93875 aaacaaaacaaaacatttta 93856
>gb|AC108051.3| Homo sapiens BAC clone RP11-332D2 from 2, complete sequence Length = 119875 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 89040 aaacaaaacaaaacatttta 89021
>gb|AC114748.4| Homo sapiens BAC clone RP11-164A18 from 2, complete sequence Length = 127561 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 93165 aaacaaaacaaaacatttta 93146
>gb|AF242431.1|AF242431S1 Mus musculus neuronal apoptosis inhibitory protein 6 (Naip6) gene, complete cds; and Naip3 gene, exons 2-9 and 11-16 Length = 117791 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||| ||||||||| Sbjct: 30205 aaacaaaacaaaactttttatttg 30228
>gb|AF367969.1|AF367967S3 Mus musculus neuronal apoptosis inhibitory protein 2 (Naip2) gene, exons 1 through 8 and complete cds; neuronal apoptosis inhibitory protein 5 (Naip5) gene, complete cds; delta neuronal apoptosis inhibitory protein (deltaNaip) pseudogene; and neuronal apoptosis inhibitory protein 6 (Naip6) gene, complete cds Length = 147984 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||| ||||||||| Sbjct: 141169 aaacaaaacaaaactttttatttg 141192
>gb|AF250324.1|AF250324 Homo sapiens chromosome 4q35 BAC clones RPCI-11-463J17 and RPCI-6-92G13RCB2, complete sequence Length = 245708 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 152051 aaacaaaacaaaacatttta 152032
>emb|BX005163.13| Mouse DNA sequence from clone RP23-408E16 on chromosome X, complete sequence Length = 188605 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 98044 aaacaaaacaaaacatttta 98063
>emb|BX005477.7| Zebrafish DNA sequence from clone CH211-131K10 in linkage group 13, complete sequence Length = 169924 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 102608 aaacaaaacaaaacatttta 102589
>dbj|AB014526.1| Homo sapiens mRNA for KIAA0626 protein, partial cds Length = 6184 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 atcaggggctgctccttgta 252 |||||||||||||||||||| Sbjct: 1442 atcaggggctgctccttgta 1461
>gb|BC050768.1| Mus musculus cyclin-dependent kinase 5, regulatory subunit (p35) 1, mRNA (cDNA clone MGC:58293 IMAGE:6533538), complete cds Length = 4166 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3262 aaacaaaacaaaacattttttttg 3285
>gb|AC154912.3| Mus musculus BAC clone RP23-23B10 from 17, complete sequence Length = 228141 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 217774 aaacaaaacaaaacatttta 217793
>emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in linkage group 20, complete sequence Length = 176463 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 caaacaaaacaaaacattttattt 26 |||||||||||||||||| ||||| Sbjct: 125580 caaacaaaacaaaacattctattt 125603
>emb|BX530065.7| Zebrafish DNA sequence from clone CH211-73J11 in linkage group 20, complete sequence Length = 39806 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 caaacaaaacaaaacattttattt 26 |||||||||||||||||| ||||| Sbjct: 19010 caaacaaaacaaaacattctattt 18987
>emb|AL954652.3| Zebrafish DNA sequence from clone CH211-239O15 in linkage group 4, complete sequence Length = 152900 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 60274 aaacaaaacaaaacatttta 60255
>gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, complete sequence Length = 236335 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 59580 aaacaaaacaaaacatttta 59599
>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete sequence Length = 255772 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 caaacaaaacaaaacatttt 22 |||||||||||||||||||| Sbjct: 243778 caaacaaaacaaaacatttt 243759
>gb|AC005920.1|AC005920 Homo sapiens chromosome 17, clone hRPK.700_H_6, complete sequence Length = 175793 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 |||||||||||||||| ||||||| Sbjct: 105552 aaacaaaacaaaacatgttatttg 105575
>gb|AC004766.1|AC004766 Drosophila melanogaster DNA sequence (P1s DS08108 (D156) and DS09214 (D202)), complete sequence Length = 93932 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caaacaaaacaaaacatttt 22 |||||||||||||||||||| Sbjct: 83692 caaacaaaacaaaacatttt 83711
>gb|AC131739.3| Mus musculus BAC clone RP23-97B15 from 13, complete sequence Length = 241046 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||| |||||||| Sbjct: 186601 aaacaaaacaaaacactttatttg 186578
>gb|BC058697.1| Mus musculus cyclin-dependent kinase 5, regulatory subunit (p35) 1, mRNA (cDNA clone MGC:65701 IMAGE:6825809), complete cds Length = 3542 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacattttatttg 27 ||||||||||||||||||| |||| Sbjct: 3251 aaacaaaacaaaacattttttttg 3274
>gb|AC140301.3| Mus musculus BAC clone RP23-435M8 from 5, complete sequence Length = 197633 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caaacaaaacaaaacatttt 22 |||||||||||||||||||| Sbjct: 71788 caaacaaaacaaaacatttt 71807
>gb|AC121815.4| Mus musculus BAC clone RP23-458C8 from 7, complete sequence Length = 173154 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 87074 aaacaaaacaaaacatttta 87055
>emb|AL844193.6| Zebrafish DNA sequence from clone DKEY-28J3, complete sequence Length = 210900 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caaacaaaacaaaacatttt 22 |||||||||||||||||||| Sbjct: 17486 caaacaaaacaaaacatttt 17505
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gctccttgtacctcaaagtg 262 |||||||||||||||||||| Sbjct: 3313397 gctccttgtacctcaaagtg 3313416
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ggcaaacaaaacaaaacatt 20 |||||||||||||||||||| Sbjct: 1449680 ggcaaacaaaacaaaacatt 1449661
>gb|AC162526.3| Mus musculus BAC clone RP23-50I19 from chromosome 13, complete sequence Length = 219418 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 181767 aaacaaaacaaaacatttta 181786
>emb|AL732412.8| Mouse DNA sequence from clone RP23-114P13 on chromosome X, complete sequence Length = 142781 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 97726 aaacaaaacaaaacatttta 97707
>emb|AL611963.24| Mouse DNA sequence from clone RP23-79J18 on chromosome 4, complete sequence Length = 222196 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaacaaaacaaaacatttta 23 |||||||||||||||||||| Sbjct: 114104 aaacaaaacaaaacatttta 114123 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,193,764 Number of Sequences: 3902068 Number of extensions: 4193764 Number of successful extensions: 462513 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 461525 Number of HSP's gapped (non-prelim): 988 length of query: 302 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 280 effective length of database: 17,147,199,772 effective search space: 4801215936160 effective search space used: 4801215936160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)