ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl04a06 |
|---|---|
| Clone Library Name | barley_pub |
>NQRB_VIBCH (Q9KPS2) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 415 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = -1 Query: 193 SINVKASNQLMNIQIFFFPFLCPAW*KGLFGAGGGTTTCVNHKAGSSAVEPISLAHHHY 17 S +V+ S L I I + + PA G++ AGG +NH + I + HY Sbjct: 44 SSHVRDSVDLKRIMIMVWLAVFPAMFWGMYNAGGQAIAALNHLYSGDQLAAIVAGNWHY 102
>NQRB_VIBVY (Q7MIC8) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 414 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = -1 Query: 193 SINVKASNQLMNIQIFFFPFLCPAW*KGLFGAGGGTTTCVNHKAGSSAVEPISLAHHHY 17 S +V+ S L I I + + PA G++ AGG +NH + I + HY Sbjct: 44 SSHVRDSVDLKRIMIMVWFAVFPAMFWGMYNAGGQAIAALNHMYAGDQLAQIIAGNWHY 102
>NQRB_VIBVU (Q8DBJ5) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 414 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = -1 Query: 193 SINVKASNQLMNIQIFFFPFLCPAW*KGLFGAGGGTTTCVNHKAGSSAVEPISLAHHHY 17 S +V+ S L I I + + PA G++ AGG +NH + I + HY Sbjct: 44 SSHVRDSVDLKRIMIMVWFAVFPAMFWGMYNAGGQAIAALNHMYAGDQLAQIIAGNWHY 102
>NQRB_VIBHA (Q9RFW0) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 413 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/59 (27%), Positives = 26/59 (44%) Frame = -1 Query: 193 SINVKASNQLMNIQIFFFPFLCPAW*KGLFGAGGGTTTCVNHKAGSSAVEPISLAHHHY 17 S +V+ S L I I + + PA G++ AGG +NH + + + HY Sbjct: 43 SSHVRDSVDLKRIMIMVWFAVFPAMFWGMYNAGGQAIAALNHMYAGDQLATVIAGNWHY 101
>NQRB_VIBAL (Q56587) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 413 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -1 Query: 193 SINVKASNQLMNIQIFFFPFLCPAW*KGLFGAGGGTTTCVNHK-AGSSAVEPISLAHHHY 17 S +V+ S L I I + + PA G++ AGG +NH AG IS H++ Sbjct: 43 SSHVRDSVDLKRIMIMVWFAVFPAMFWGMYNAGGQAIAALNHMYAGDQLATVISGNWHYW 102 Query: 16 IAQ 8 + + Sbjct: 103 LTE 105
>NQRB_VIBPA (Q87MA7) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 414 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/59 (27%), Positives = 26/59 (44%) Frame = -1 Query: 193 SINVKASNQLMNIQIFFFPFLCPAW*KGLFGAGGGTTTCVNHKAGSSAVEPISLAHHHY 17 S +V+ S L I I + + PA G++ AGG +NH + + + HY Sbjct: 44 SSHVRDSVDLKRIMIMVWFAVFPAMFWGMYNAGGQAIAALNHMYAGDQLATVIAGNWHY 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,673,614 Number of Sequences: 219361 Number of extensions: 792794 Number of successful extensions: 2060 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2009 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2050 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
