ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl04a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GUX1_NEUCR (P38676) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoc... 35 0.042
2DPP10_RAT (Q6Q629) Inactive dipeptidyl peptidase 10 (Dipeptidyl ... 30 1.0
3HIS4_BLOFL (Q7VQW6) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylami... 29 2.3
4LIP1_GEOCN (P17573) Lipase 1 precursor (EC 3.1.1.3) (Lipase I) (... 28 5.2
5SAP_ARATH (Q9FKH1) Transcriptional regulator STERILE APETALA 28 6.8
6YQV5_CAEEL (Q09554) Probable G-protein coupled receptor F27E5.5 28 6.8
7UDPE_NPVMB (Q83140) Ecdysteroid UDP-glucosyltransferase precurso... 28 6.8
8MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog) (SMA... 28 6.8
9KPCL_HUMAN (P24723) Protein kinase C eta type (EC 2.7.11.13) (nP... 28 6.8
10LCMT2_NEUCR (Q9P3K9) Leucine carboxyl methyltransferase 2 (EC 2.... 28 6.8
11KPCL_RAT (Q64617) Protein kinase C eta type (EC 2.7.11.13) (nPKC... 28 6.8
12KPCL_MOUSE (P23298) Protein kinase C eta type (EC 2.7.11.13) (nP... 28 6.8
13BASI_CHICK (P17790) Basigin precursor (Blood-brain barrier HT7 a... 27 8.8
14MASY_RICCO (P17815) Malate synthase, glyoxysomal (EC 2.3.3.9) 27 8.8
15AA3R_MOUSE (Q61618) Adenosine A3 receptor (A3AR) 27 8.8
16OR6K2_HUMAN (Q8NGY2) Olfactory receptor 6K2 27 8.8
17DDL_BUCBP (P59435) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a... 27 8.8
18BC11B_HUMAN (Q9C0K0) B-cell lymphoma/leukemia 11B (B-cell CLL/ly... 27 8.8

>GUX1_NEUCR (P38676) Exoglucanase 1 precursor (EC 3.2.1.91)|
           (Exocellobiohydrolase 1) (1,4-beta-cellobiohydrolase)
          Length = 516

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -3

Query: 401 HLYLSTYPVGSS-TPVHTPYISASQKPKTQELSSSTKLQHPS--YALHARSDDGMSMSES 231
           HL +S +  GSS TP   P  SAS    T + SS++   +PS   A H     G+  S  
Sbjct: 437 HLGISPFSGGSSGTPPSNPSSSASPTSSTAKPSSTSTASNPSGTGAAHWAQCGGIGFSGP 496

Query: 230 FACMHAYACAR 198
             C   Y CA+
Sbjct: 497 TTCPEPYTCAK 507



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>DPP10_RAT (Q6Q629) Inactive dipeptidyl peptidase 10 (Dipeptidyl peptidase X)|
           (Kv4 potassium channel auxiliary subunit)
          Length = 796

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 57  DHHFFHCDTVINTATNQETDAAA-SLEYLGRDMEREGVYRSSNV 185
           D  FF C TV+   ++ +  A+A S  YLG   + E  Y++S+V
Sbjct: 664 DEKFFKCGTVVAPISDMKLYASAFSERYLGMPSKEESTYQASSV 707



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>HIS4_BLOFL (Q7VQW6) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 251

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 392 LSTYPVGSSTPVHTPYISASQKPKTQELSSSTKLQHPSYALHARSDDG 249
           LSTY    +T +H   +  ++ PK ++LS   +L H +   H +   G
Sbjct: 34  LSTYVQQGATMIHLVDLDGARNPKNRQLSLIKELTHTAITSHLKIQIG 81



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>LIP1_GEOCN (P17573) Lipase 1 precursor (EC 3.1.1.3) (Lipase I) (GCL I)|
          Length = 563

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +1

Query: 142 DGTWRGRVCIGVATSTTTMRAHAYACMQANDSDMDMPSSLRACNAYEGCWS 294
           +GT    V I   T+    +   Y C +A+D+ +D     R  + Y G WS
Sbjct: 373 EGTILAPVAINATTTPHVKKWLKYICSEASDASLD-----RVLSLYPGSWS 418



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>SAP_ARATH (Q9FKH1) Transcriptional regulator STERILE APETALA|
          Length = 446

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
 Frame = +1

Query: 118 QLLAWSIW------DGTWRGRVCIGVATSTT-TMRAHAYACMQANDSDMDMPSSL 261
           QLL+  +W        TWR        T+     R H Y  +Q + SD+D P SL
Sbjct: 85  QLLSRQVWARTHLMHDTWRDEFIYRHRTARNFRTRTHTYFTLQFDPSDVDEPDSL 139



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>YQV5_CAEEL (Q09554) Probable G-protein coupled receptor F27E5.5|
          Length = 377

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = -3

Query: 236 ESFACMHAYACARIVVVDVATPIHTLPLHVPSQILQASSCIRFLIRCCVNYSVTVKKMVV 57
           E F C  A+      ++ +A   +T  LH   +IL  S+C+   I     Y + +  +V 
Sbjct: 34  ELFFCFIAFPLNIFFIIIIA---NTTTLHRNLRILLISTCVADAIYAISRYMILIPLLVA 90

Query: 56  WLF 48
           +LF
Sbjct: 91  YLF 93



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>UDPE_NPVMB (Q83140) Ecdysteroid UDP-glucosyltransferase precursor (EC 2.4.1.-)|
          Length = 528

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 108 ETDAAASLEYLGRDMEREGVYRSSNVDDDDA 200
           E DA+ S EY GR M   GV+R   +  D +
Sbjct: 87  EIDASLSQEYYGRLMRHAGVFRKRGIVADSS 117



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>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/63 (30%), Positives = 24/63 (38%)
 Frame = -3

Query: 401  HLYLSTYPVGSSTPVHTPYISASQKPKTQELSSSTKLQHPSYALHARSDDGMSMSESFAC 222
            H  L   PV ++ P H   +S S KP      SS     P   L   ++ G S     A 
Sbjct: 3396 HAQLQRAPVETAQPAHPSPVSVSMKPDLPSPLSSQAA--PKQPLFVPANSGPSTPPGLAL 3453

Query: 221  MHA 213
             HA
Sbjct: 3454 PHA 3456



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>KPCL_HUMAN (P24723) Protein kinase C eta type (EC 2.7.11.13) (nPKC-eta)|
           (PKC-L)
          Length = 682

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 280 HMHCMHVATTACPCQNH 230
           H  C H+  TAC CQN+
Sbjct: 210 HKRCHHLIVTACTCQNN 226



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>LCMT2_NEUCR (Q9P3K9) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)|
          Length = 1213

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 377 VGSSTPVHTPYISASQKPKTQELSSSTKLQHPSYALHARSDD 252
           VGS+ P  + Y    +KPK    +++T    P++  HA + D
Sbjct: 20  VGSAKPTTSTYSKKQKKPKATTTTTTTDGTTPTHNEHASAKD 61



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>KPCL_RAT (Q64617) Protein kinase C eta type (EC 2.7.11.13) (nPKC-eta)|
           (PKC-L)
          Length = 683

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 280 HMHCMHVATTACPCQNH 230
           H  C H+  TAC CQN+
Sbjct: 211 HKRCHHLIVTACTCQNN 227



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>KPCL_MOUSE (P23298) Protein kinase C eta type (EC 2.7.11.13) (nPKC-eta)|
           (PKC-L)
          Length = 683

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 280 HMHCMHVATTACPCQNH 230
           H  C H+  TAC CQN+
Sbjct: 211 HKRCHHLIVTACTCQNN 227



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>BASI_CHICK (P17790) Basigin precursor (Blood-brain barrier HT7 antigen)|
           (Neurothelin) (5A11 antigen)
          Length = 388

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 11/46 (23%)
 Frame = +1

Query: 136 IWDGTWRGRVCIGV-----ATST------TTMRAHAYACMQANDSD 240
           +WDG W+ RV I       +TST      T+  +  Y C  +ND D
Sbjct: 75  LWDGAWQDRVQINATYNLHSTSTIYIANLTSDDSGTYECRASNDPD 120



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>MASY_RICCO (P17815) Malate synthase, glyoxysomal (EC 2.3.3.9)|
          Length = 567

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 233 ILTWTCRRRYVHAM 274
           +L WTC RR VHAM
Sbjct: 333 LLVWTCHRRGVHAM 346



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>AA3R_MOUSE (Q61618) Adenosine A3 receptor (A3AR)|
          Length = 319

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = -3

Query: 221 MHAYACARIVVVDVATPIHTLPLHVPSQILQASSCIRFL-IRCCVNYSVTVKKMVVWLFI 45
           MH YAC   + +     I T   H     L A +  R+L ++  V Y     +  +WLF+
Sbjct: 79  MHFYAC---LFMSCVLLIFT---HASIMSLLAIAVHRYLRVKLTVRYRTVTTQRRIWLFL 132

Query: 44  DLSW 33
            L W
Sbjct: 133 GLCW 136



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>OR6K2_HUMAN (Q8NGY2) Olfactory receptor 6K2|
          Length = 324

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 158 PLHVPSQILQASSCIRFLIRCCVNYSVTVKKMVVWL 51
           PLH PS I+    C +  + CCV   +T    + W+
Sbjct: 128 PLHYPS-IMTPKLCTQLTLSCCVCGFITPLPEIAWI 162



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>DDL_BUCBP (P59435) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 309

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 109 KRMQLLAWSIWDGTWRGRVCIGVATSTTTMRAHAYACMQANDSDMDMPSSLRACNAYE 282
           K++ L AW+I DGT  GRV + +          A  C    D  +   S+ +A  +Y+
Sbjct: 241 KKITLTAWNIIDGTGWGRVDVIMDYKNKFWLLEANTCPGMTDHSLFPMSAKKAGISYQ 298



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>BC11B_HUMAN (Q9C0K0) B-cell lymphoma/leukemia 11B (B-cell CLL/lymphoma 11B)|
           (Radiation-induced tumor suppressor gene 1 protein)
           (hRit1) (COUP-TF-interacting protein 2)
          Length = 894

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 21/77 (27%), Positives = 31/77 (40%)
 Frame = -3

Query: 395 YLSTYPVGSSTPVHTPYISASQKPKTQELSSSTKLQHPSYALHARSDDGMSMSESFACMH 216
           +LST P+    P  TP      K K+ E    T     +  +H RS  G    +   C H
Sbjct: 403 FLSTPPLPPMPPGGTPPPQPPAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDH 462

Query: 215 AYACARIVVVDVATPIH 165
           A + A  +   + T +H
Sbjct: 463 ACSQASKLKRHMKTHMH 479


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,266,200
Number of Sequences: 219361
Number of extensions: 999572
Number of successful extensions: 2973
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2973
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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