Clone Name | rbastl04a05 |
---|---|
Clone Library Name | barley_pub |
>GUX1_NEUCR (P38676) Exoglucanase 1 precursor (EC 3.2.1.91)| (Exocellobiohydrolase 1) (1,4-beta-cellobiohydrolase) Length = 516 Score = 35.0 bits (79), Expect = 0.042 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Frame = -3 Query: 401 HLYLSTYPVGSS-TPVHTPYISASQKPKTQELSSSTKLQHPS--YALHARSDDGMSMSES 231 HL +S + GSS TP P SAS T + SS++ +PS A H G+ S Sbjct: 437 HLGISPFSGGSSGTPPSNPSSSASPTSSTAKPSSTSTASNPSGTGAAHWAQCGGIGFSGP 496 Query: 230 FACMHAYACAR 198 C Y CA+ Sbjct: 497 TTCPEPYTCAK 507
>DPP10_RAT (Q6Q629) Inactive dipeptidyl peptidase 10 (Dipeptidyl peptidase X)| (Kv4 potassium channel auxiliary subunit) Length = 796 Score = 30.4 bits (67), Expect = 1.0 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +3 Query: 57 DHHFFHCDTVINTATNQETDAAA-SLEYLGRDMEREGVYRSSNV 185 D FF C TV+ ++ + A+A S YLG + E Y++S+V Sbjct: 664 DEKFFKCGTVVAPISDMKLYASAFSERYLGMPSKEESTYQASSV 707
>HIS4_BLOFL (Q7VQW6) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 251 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -3 Query: 392 LSTYPVGSSTPVHTPYISASQKPKTQELSSSTKLQHPSYALHARSDDG 249 LSTY +T +H + ++ PK ++LS +L H + H + G Sbjct: 34 LSTYVQQGATMIHLVDLDGARNPKNRQLSLIKELTHTAITSHLKIQIG 81
>LIP1_GEOCN (P17573) Lipase 1 precursor (EC 3.1.1.3) (Lipase I) (GCL I)| Length = 563 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +1 Query: 142 DGTWRGRVCIGVATSTTTMRAHAYACMQANDSDMDMPSSLRACNAYEGCWS 294 +GT V I T+ + Y C +A+D+ +D R + Y G WS Sbjct: 373 EGTILAPVAINATTTPHVKKWLKYICSEASDASLD-----RVLSLYPGSWS 418
>SAP_ARATH (Q9FKH1) Transcriptional regulator STERILE APETALA| Length = 446 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Frame = +1 Query: 118 QLLAWSIW------DGTWRGRVCIGVATSTT-TMRAHAYACMQANDSDMDMPSSL 261 QLL+ +W TWR T+ R H Y +Q + SD+D P SL Sbjct: 85 QLLSRQVWARTHLMHDTWRDEFIYRHRTARNFRTRTHTYFTLQFDPSDVDEPDSL 139
>YQV5_CAEEL (Q09554) Probable G-protein coupled receptor F27E5.5| Length = 377 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/63 (26%), Positives = 29/63 (46%) Frame = -3 Query: 236 ESFACMHAYACARIVVVDVATPIHTLPLHVPSQILQASSCIRFLIRCCVNYSVTVKKMVV 57 E F C A+ ++ +A +T LH +IL S+C+ I Y + + +V Sbjct: 34 ELFFCFIAFPLNIFFIIIIA---NTTTLHRNLRILLISTCVADAIYAISRYMILIPLLVA 90 Query: 56 WLF 48 +LF Sbjct: 91 YLF 93
>UDPE_NPVMB (Q83140) Ecdysteroid UDP-glucosyltransferase precursor (EC 2.4.1.-)| Length = 528 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 Query: 108 ETDAAASLEYLGRDMEREGVYRSSNVDDDDA 200 E DA+ S EY GR M GV+R + D + Sbjct: 87 EIDASLSQEYYGRLMRHAGVFRKRGIVADSS 117
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/63 (30%), Positives = 24/63 (38%) Frame = -3 Query: 401 HLYLSTYPVGSSTPVHTPYISASQKPKTQELSSSTKLQHPSYALHARSDDGMSMSESFAC 222 H L PV ++ P H +S S KP SS P L ++ G S A Sbjct: 3396 HAQLQRAPVETAQPAHPSPVSVSMKPDLPSPLSSQAA--PKQPLFVPANSGPSTPPGLAL 3453 Query: 221 MHA 213 HA Sbjct: 3454 PHA 3456
>KPCL_HUMAN (P24723) Protein kinase C eta type (EC 2.7.11.13) (nPKC-eta)| (PKC-L) Length = 682 Score = 27.7 bits (60), Expect = 6.8 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 280 HMHCMHVATTACPCQNH 230 H C H+ TAC CQN+ Sbjct: 210 HKRCHHLIVTACTCQNN 226
>LCMT2_NEUCR (Q9P3K9) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)| Length = 1213 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -3 Query: 377 VGSSTPVHTPYISASQKPKTQELSSSTKLQHPSYALHARSDD 252 VGS+ P + Y +KPK +++T P++ HA + D Sbjct: 20 VGSAKPTTSTYSKKQKKPKATTTTTTTDGTTPTHNEHASAKD 61
>KPCL_RAT (Q64617) Protein kinase C eta type (EC 2.7.11.13) (nPKC-eta)| (PKC-L) Length = 683 Score = 27.7 bits (60), Expect = 6.8 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 280 HMHCMHVATTACPCQNH 230 H C H+ TAC CQN+ Sbjct: 211 HKRCHHLIVTACTCQNN 227
>KPCL_MOUSE (P23298) Protein kinase C eta type (EC 2.7.11.13) (nPKC-eta)| (PKC-L) Length = 683 Score = 27.7 bits (60), Expect = 6.8 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 280 HMHCMHVATTACPCQNH 230 H C H+ TAC CQN+ Sbjct: 211 HKRCHHLIVTACTCQNN 227
>BASI_CHICK (P17790) Basigin precursor (Blood-brain barrier HT7 antigen)| (Neurothelin) (5A11 antigen) Length = 388 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 11/46 (23%) Frame = +1 Query: 136 IWDGTWRGRVCIGV-----ATST------TTMRAHAYACMQANDSD 240 +WDG W+ RV I +TST T+ + Y C +ND D Sbjct: 75 LWDGAWQDRVQINATYNLHSTSTIYIANLTSDDSGTYECRASNDPD 120
>MASY_RICCO (P17815) Malate synthase, glyoxysomal (EC 2.3.3.9)| Length = 567 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +2 Query: 233 ILTWTCRRRYVHAM 274 +L WTC RR VHAM Sbjct: 333 LLVWTCHRRGVHAM 346
>AA3R_MOUSE (Q61618) Adenosine A3 receptor (A3AR)| Length = 319 Score = 27.3 bits (59), Expect = 8.8 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Frame = -3 Query: 221 MHAYACARIVVVDVATPIHTLPLHVPSQILQASSCIRFL-IRCCVNYSVTVKKMVVWLFI 45 MH YAC + + I T H L A + R+L ++ V Y + +WLF+ Sbjct: 79 MHFYAC---LFMSCVLLIFT---HASIMSLLAIAVHRYLRVKLTVRYRTVTTQRRIWLFL 132 Query: 44 DLSW 33 L W Sbjct: 133 GLCW 136
>OR6K2_HUMAN (Q8NGY2) Olfactory receptor 6K2| Length = 324 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -3 Query: 158 PLHVPSQILQASSCIRFLIRCCVNYSVTVKKMVVWL 51 PLH PS I+ C + + CCV +T + W+ Sbjct: 128 PLHYPS-IMTPKLCTQLTLSCCVCGFITPLPEIAWI 162
>DDL_BUCBP (P59435) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 309 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = +1 Query: 109 KRMQLLAWSIWDGTWRGRVCIGVATSTTTMRAHAYACMQANDSDMDMPSSLRACNAYE 282 K++ L AW+I DGT GRV + + A C D + S+ +A +Y+ Sbjct: 241 KKITLTAWNIIDGTGWGRVDVIMDYKNKFWLLEANTCPGMTDHSLFPMSAKKAGISYQ 298
>BC11B_HUMAN (Q9C0K0) B-cell lymphoma/leukemia 11B (B-cell CLL/lymphoma 11B)| (Radiation-induced tumor suppressor gene 1 protein) (hRit1) (COUP-TF-interacting protein 2) Length = 894 Score = 27.3 bits (59), Expect = 8.8 Identities = 21/77 (27%), Positives = 31/77 (40%) Frame = -3 Query: 395 YLSTYPVGSSTPVHTPYISASQKPKTQELSSSTKLQHPSYALHARSDDGMSMSESFACMH 216 +LST P+ P TP K K+ E T + +H RS G + C H Sbjct: 403 FLSTPPLPPMPPGGTPPPQPPAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDH 462 Query: 215 AYACARIVVVDVATPIH 165 A + A + + T +H Sbjct: 463 ACSQASKLKRHMKTHMH 479 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,266,200 Number of Sequences: 219361 Number of extensions: 999572 Number of successful extensions: 2973 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2873 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2973 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)