ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl04a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108410.1| Zea mays PCO086236 mRNA sequence 56 9e-05
2ref|NM_197355.1| Oryza sativa (japonica cultivar-group) putative... 50 0.006
3gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 gen... 50 0.006
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
5dbj|AK059055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
7gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cance... 46 0.089
8gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cance... 46 0.089
9gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 44 0.35
10gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, com... 44 0.35
11gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
12gb|AC134586.4| Mus musculus BAC clone RP23-304K3 from chromosome... 44 0.35
13gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosom... 44 0.35
14gb|AC160461.3| Mus musculus chromosome 15, clone RP23-174B9, com... 44 0.35
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
16emb|AL669895.9| Mouse DNA sequence from clone RP23-31N7 on chrom... 44 0.35
17gb|AC123650.7| Mus musculus chromosome 1, clone RP23-124N16, com... 42 1.4
18gb|AC119893.9| Mus musculus chromosome 1, clone RP24-225A6, comp... 42 1.4
19gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, compl... 42 1.4
20gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 fro... 42 1.4
21gb|AC062004.5| Homo sapiens chromosome 8, clone RP11-325O20, com... 42 1.4
22gb|AC156284.8| Mus musculus 6 BAC RP24-392D13 (Roswell Park Canc... 42 1.4
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24gb|AC112510.9| Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cance... 42 1.4
25dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
26emb|AL845440.23| Mouse DNA sequence from clone RP23-294B7 on chr... 42 1.4
27gb|AC154595.2| Mus musculus BAC clone RP23-353D15 from 13, compl... 42 1.4
28gb|AC153855.4| Mus musculus 6 BAC RP23-175B24 (Roswell Park Canc... 42 1.4
29gb|AC142258.4| Mus musculus BAC clone RP24-511I20 from 13, compl... 42 1.4
30gb|AC132425.3| Mus musculus BAC clone RP23-311O15 from 7, comple... 42 1.4
31emb|CT030182.8| Mouse DNA sequence from clone RP23-21N15 on chro... 42 1.4
32ref|XM_467892.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
33gb|AC156396.8| Mus musculus 6 BAC RP24-303J2 (Roswell Park Cance... 40 5.5
34gb|AY333965.1| Cat.B detection vector, complete sequence 40 5.5
35gb|AC132248.3| Mus musculus BAC clone RP24-425H24 from chromosom... 40 5.5
36gb|AC139943.3| Mus musculus BAC clone RP23-472M3 from chromosome... 40 5.5
37gb|AC167723.3| Mus musculus BAC RP23-297A10 (Roswell Park Cance... 40 5.5
38gb|AC114819.4| Mus musculus BAC clone RP23-52J20 from chromosome... 40 5.5
39gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosom... 40 5.5
40emb|AL136164.8| Human DNA sequence from clone RP3-331H24 on chro... 40 5.5
41emb|AL109626.6|HSJ601K24 Human DNA sequence from clone RP4-601K2... 40 5.5
42gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, co... 40 5.5
43emb|X57845.1|HVGNIRE H.vulgare gene for nitrate reductase 40 5.5
44emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
45emb|AL626785.26| Mouse DNA sequence from clone RP23-220F20 on ch... 40 5.5
46emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
47gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell ... 40 5.5
48gb|AC103594.3| Homo sapiens chromosome 1 clone RP11-289A2, compl... 40 5.5
49gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell ... 40 5.5
50gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome... 40 5.5
51gb|AC159282.2| Mus musculus BAC clone RP23-329M17 from chromosom... 40 5.5
52gb|AY255629.1| Mus musculus Ret receptor protein (Ret) gene, pro... 40 5.5
53gb|AC048387.16| Homo sapiens chromosome 8, clone RP11-465K16, co... 40 5.5
54gb|AC026463.5| Homo sapiens chromosome 5 clone RP11-317I23, comp... 40 5.5
55dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
57gb|AC079816.31| Mus musculus strain C57BL/6J chromosome 11 clone... 40 5.5
58dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
59gb|AC010386.5|AC010386 Homo sapiens chromosome 5 clone CTD-2074B... 40 5.5
60dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
61dbj|AK111266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
62gb|AC006031.2|AC006031 Homo sapiens BAC clone RP11-44G14 from 7q... 40 5.5
63emb|AL513502.3|HS123J20 Homo sapiens chromosome 9 BAC RP11-123j2... 40 5.5
64emb|CT025539.18| Mouse DNA sequence from clone RP23-221K23 on ch... 40 5.5
65gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 ... 40 5.5
66emb|CT573093.3| CH250-1K10, complete sequence 40 5.5
67emb|AL954325.8| Mouse DNA sequence from clone RP23-416H10 on chr... 40 5.5
68emb|AL450004.4|HS520K3 Homo sapiens chromosome 9 BAC RP11-520K3,... 40 5.5
69dbj|AB216157.1| Equus caballus DNA, microsatellite TKY2214 40 5.5
70emb|AL626774.23| Mouse DNA sequence from clone RP23-198O15 on ch... 40 5.5 
>gb|AY108410.1| Zea mays PCO086236 mRNA sequence
          Length = 496

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 16  agggttcttattaatcaccacgacaaatcaataaataacc 55
           ||||||||||||||| ||||  ||||||||||||||||||
Sbjct: 322 agggttcttattaattaccagaacaaatcaataaataacc 283



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 80  cactgtaattaacacagcaacgaatcaa 107
           |||| |||||||||||||||||||||||
Sbjct: 237 cactataattaacacagcaacgaatcaa 210
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>ref|NM_197355.1| Oryza sativa (japonica cultivar-group) putative transcription factor
            (OSJNBa0076F20.5), mRNA
          Length = 3478

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 80   cactgtaattaacacagcaacgaatcaagaaacggat 116
            ||||||||||||||||  |||||||||||||| ||||
Sbjct: 2855 cactgtaattaacacaagaacgaatcaagaaatggat 2819



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 383  aggtagatagatacaaatggtacaaga 409
            |||||| ||||||||||||||||||||
Sbjct: 2587 aggtaggtagatacaaatggtacaaga 2561
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>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
             sequence
          Length = 165394

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 80    cactgtaattaacacagcaacgaatcaagaaacggat 116
             ||||||||||||||||  |||||||||||||| ||||
Sbjct: 38332 cactgtaattaacacaagaacgaatcaagaaatggat 38368



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 383   aggtagatagatacaaatggtacaaga 409
             |||||| ||||||||||||||||||||
Sbjct: 38600 aggtaggtagatacaaatggtacaaga 38626
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 80       cactgtaattaacacagcaacgaatcaagaaacggat 116
                ||||||||||||||||  |||||||||||||| ||||
Sbjct: 19410466 cactgtaattaacacaagaacgaatcaagaaatggat 19410502



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 383      aggtagatagatacaaatggtacaaga 409
                |||||| ||||||||||||||||||||
Sbjct: 19410734 aggtaggtagatacaaatggtacaaga 19410760
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>dbj|AK059055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F02, full
            insert sequence
          Length = 1418

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 80   cactgtaattaacacagcaacgaatcaagaaacggat 116
            ||||||||||||||||  |||||||||||||| ||||
Sbjct: 1123 cactgtaattaacacaagaacgaatcaagaaatggat 1087



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 383 aggtagatagatacaaatggtacaaga 409
           |||||| ||||||||||||||||||||
Sbjct: 855 aggtaggtagatacaaatggtacaaga 829
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 80       cactgtaattaacacagcaacgaatcaagaaacggat 116
                ||||||||||||||||  |||||||||||||| ||||
Sbjct: 19421742 cactgtaattaacacaagaacgaatcaagaaatggat 19421778



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 383      aggtagatagatacaaatggtacaaga 409
                |||||| ||||||||||||||||||||
Sbjct: 19422010 aggtaggtagatacaaatggtacaaga 19422036
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>gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 241211

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 386   tagatagatacaaatggtacaagaaag 412
             |||||||||||||| ||||||||||||
Sbjct: 80699 tagatagatacaaaaggtacaagaaag 80673



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 381    gtaggtagatagatacaaatggtacaaga 409
              |||| |||||||||||||| |||||||||
Sbjct: 168513 gtagatagatagatacaaaaggtacaaga 168485
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>gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 197401

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 386   tagatagatacaaatggtacaagaaag 412
             |||||||||||||| ||||||||||||
Sbjct: 15463 tagatagatacaaaaggtacaagaaag 15489
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 184     tcgacgacgacgatgcgcgcgc 205
               ||||||||||||||||||||||
Sbjct: 2258751 tcgacgacgacgatgcgcgcgc 2258772
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>gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, complete sequence
          Length = 216103

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 205   catgcatatgcatgcatgcagg 226
             ||||||||||||||||||||||
Sbjct: 70674 catgcatatgcatgcatgcagg 70695
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>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0015G13, complete sequence
          Length = 143966

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 205   catgcatatgcatgcatgcagg 226
             ||||||||||||||||||||||
Sbjct: 68441 catgcatatgcatgcatgcagg 68420
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>gb|AC134586.4| Mus musculus BAC clone RP23-304K3 from chromosome 9, complete sequence
          Length = 166474

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 198   gcgcgcgcatgcatatgcatgc 219
             ||||||||||||||||||||||
Sbjct: 51036 gcgcgcgcatgcatatgcatgc 51015
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>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence
          Length = 217511

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 198    gcgcgcgcatgcatatgcatgc 219
              ||||||||||||||||||||||
Sbjct: 208131 gcgcgcgcatgcatatgcatgc 208110
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>gb|AC160461.3| Mus musculus chromosome 15, clone RP23-174B9, complete sequence
          Length = 208877

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 205    catgcatatgcatgcatgcagg 226
              ||||||||||||||||||||||
Sbjct: 103995 catgcatatgcatgcatgcagg 104016
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 205     catgcatatgcatgcatgcagg 226
               ||||||||||||||||||||||
Sbjct: 6366702 catgcatatgcatgcatgcagg 6366681
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>emb|AL669895.9| Mouse DNA sequence from clone RP23-31N7 on chromosome X, complete
              sequence
          Length = 197638

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 196    atgcgcgcgcatgcatatgcatgcat 221
              |||| |||||||||||||||||||||
Sbjct: 151591 atgcacgcgcatgcatatgcatgcat 151566
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>gb|AC123650.7| Mus musculus chromosome 1, clone RP23-124N16, complete sequence
          Length = 220806

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    tgcatatgcatgcatgcaggc 227
              |||||||||||||||||||||
Sbjct: 204818 tgcatatgcatgcatgcaggc 204838
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>gb|AC119893.9| Mus musculus chromosome 1, clone RP24-225A6, complete sequence
          Length = 179453

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 207    tgcatatgcatgcatgcaggc 227
              |||||||||||||||||||||
Sbjct: 137555 tgcatatgcatgcatgcaggc 137535
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>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence
          Length = 195459

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   gcatgcatatgcatgcatgca 224
             |||||||||||||||||||||
Sbjct: 93261 gcatgcatatgcatgcatgca 93281
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>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome unknown,
             complete sequence
          Length = 199332

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 145   gggacatggagagggagggtgtgta 169
             ||||||||||| |||||||||||||
Sbjct: 19310 gggacatggagtgggagggtgtgta 19334
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>gb|AC062004.5| Homo sapiens chromosome 8, clone RP11-325O20, complete sequence
          Length = 205646

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 210  atatgcatgcatgcaggcgaatgat 234
            ||||||||||||||| |||||||||
Sbjct: 2328 atatgcatgcatgcatgcgaatgat 2304
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>gb|AC156284.8| Mus musculus 6 BAC RP24-392D13 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 182146

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 381    gtaggtagatagatacaaatggtacaaga 409
              |||| |||||||||||||| |||||||||
Sbjct: 158644 gtagatagatagatacaaaaggtacaaga 158672
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 204      gcatgcatatgcatgcatgca 224
                |||||||||||||||||||||
Sbjct: 22939207 gcatgcatatgcatgcatgca 22939227



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 206      atgcatatgcatgcatgcag 225
                ||||||||||||||||||||
Sbjct: 31951157 atgcatatgcatgcatgcag 31951138
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>gb|AC112510.9| Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 192749

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    caataaataaccagaccacca 64
             |||||||||||||||||||||
Sbjct: 53053 caataaataaccagaccacca 53073
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   gcatgcatatgcatgcatgca 224
             |||||||||||||||||||||
Sbjct: 59009 gcatgcatatgcatgcatgca 59029
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>emb|AL845440.23| Mouse DNA sequence from clone RP23-294B7 on chromosome 2, complete
             sequence
          Length = 188464

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 207   tgcatatgcatgcatgcaggc 227
             |||||||||||||||||||||
Sbjct: 54945 tgcatatgcatgcatgcaggc 54965
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>gb|AC154595.2| Mus musculus BAC clone RP23-353D15 from 13, complete sequence
          Length = 180529

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 204    gcatgcatatgcatgcatgca 224
              |||||||||||||||||||||
Sbjct: 169472 gcatgcatatgcatgcatgca 169492
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>gb|AC153855.4| Mus musculus 6 BAC RP23-175B24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 183070

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 381    gtaggtagatagatacaaatggtacaaga 409
              |||| |||||||||||||| |||||||||
Sbjct: 147892 gtagatagatagatacaaaaggtacaaga 147920
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>gb|AC142258.4| Mus musculus BAC clone RP24-511I20 from 13, complete sequence
          Length = 159880

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 307   gagagctcttgagttttaggt 327
             |||||||||||||||||||||
Sbjct: 80689 gagagctcttgagttttaggt 80669
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>gb|AC132425.3| Mus musculus BAC clone RP23-311O15 from 7, complete sequence
          Length = 160552

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 207   tgcatatgcatgcatgcaggc 227
             |||||||||||||||||||||
Sbjct: 64560 tgcatatgcatgcatgcaggc 64580
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>emb|CT030182.8| Mouse DNA sequence from clone RP23-21N15 on chromosome 13, complete
             sequence
          Length = 218811

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   gcatgcatatgcatgcatgca 224
             |||||||||||||||||||||
Sbjct: 30447 gcatgcatatgcatgcatgca 30467
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>ref|XM_467892.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1032

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 atgcatatgcatgcatgcag 225
           ||||||||||||||||||||
Sbjct: 653 atgcatatgcatgcatgcag 672
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>gb|AC156396.8| Mus musculus 6 BAC RP24-303J2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 145666

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   catgcatatgcatgcatgca 224
             ||||||||||||||||||||
Sbjct: 68038 catgcatatgcatgcatgca 68057
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>gb|AY333965.1| Cat.B detection vector, complete sequence
          Length = 765

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gcatgcatatgcatgcatgc 223
           ||||||||||||||||||||
Sbjct: 132 gcatgcatatgcatgcatgc 151
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>gb|AC132248.3| Mus musculus BAC clone RP24-425H24 from chromosome 7, complete sequence
          Length = 195294

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    catgcatatgcatgcatgca 224
              ||||||||||||||||||||
Sbjct: 122765 catgcatatgcatgcatgca 122746
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>gb|AC139943.3| Mus musculus BAC clone RP23-472M3 from chromosome 7, complete sequence
          Length = 183421

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 197    tgcgcgcgcatgcatatgcatgca 220
              |||||||| |||||||||||||||
Sbjct: 108107 tgcgcgcgtatgcatatgcatgca 108084
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>gb|AC167723.3| Mus musculus  BAC RP23-297A10 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 196622

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   catgcatatgcatgcatgca 224
             ||||||||||||||||||||
Sbjct: 17006 catgcatatgcatgcatgca 17025
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>gb|AC114819.4| Mus musculus BAC clone RP23-52J20 from chromosome 8, complete sequence
          Length = 204239

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   catgcatatgcatgcatgca 224
             ||||||||||||||||||||
Sbjct: 94595 catgcatatgcatgcatgca 94576
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>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence
          Length = 177161

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    atgcatatgcatgcatgcag 225
              ||||||||||||||||||||
Sbjct: 125373 atgcatatgcatgcatgcag 125392
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>emb|AL136164.8| Human DNA sequence from clone RP3-331H24 on chromosome 6 Contains the
             5' end of a novel gene, the gene for a novel protein
             similar to opioid growth factor receptor and a CpG island,
             complete sequence
          Length = 108253

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ggggtgctggagcttggtgg 301
             ||||||||||||||||||||
Sbjct: 32311 ggggtgctggagcttggtgg 32330
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>emb|AL109626.6|HSJ601K24 Human DNA sequence from clone RP4-601K24 on chromosome 1p22.3-31.2,
            complete sequence
          Length = 129467

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 145  gggacatggagagggagggtgtgt 168
            |||||||||||||||||| |||||
Sbjct: 9844 gggacatggagagggaggttgtgt 9867
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>gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, complete sequence
          Length = 150125

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    actgtaattaacacagcaac 100
             ||||||||||||||||||||
Sbjct: 73299 actgtaattaacacagcaac 73280
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>emb|X57845.1|HVGNIRE H.vulgare gene for nitrate reductase
          Length = 7299

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  catgcatatgcatgcatgca 224
            ||||||||||||||||||||
Sbjct: 4391 catgcatatgcatgcatgca 4410
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>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08,
              complete sequence
          Length = 145670

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    catgcatatgcatgcatgca 224
              ||||||||||||||||||||
Sbjct: 142503 catgcatatgcatgcatgca 142522
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>emb|AL626785.26| Mouse DNA sequence from clone RP23-220F20 on chromosome 11 Contains a
              novel gene, the 3'  end of the Mmd gene for monocyte to
              macrophage differentiation-associated and the 3' end of the
              Hlf gene for hepatic leukemia factor, complete sequence
          Length = 172696

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    catgcatatgcatgcatgca 224
              ||||||||||||||||||||
Sbjct: 108485 catgcatatgcatgcatgca 108504
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>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14,
             complete sequence
          Length = 139855

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   catgcatatgcatgcatgca 224
             ||||||||||||||||||||
Sbjct: 11923 catgcatatgcatgcatgca 11942
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>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 160440

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    catgcatatgcatgcatgca 224
              ||||||||||||||||||||
Sbjct: 104085 catgcatatgcatgcatgca 104066
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>gb|AC103594.3| Homo sapiens chromosome 1 clone RP11-289A2, complete sequence
          Length = 51254

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 145   gggacatggagagggagggtgtgt 168
             |||||||||||||||||| |||||
Sbjct: 26143 gggacatggagagggaggttgtgt 26166
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>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187921

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   catgcatatgcatgcatgca 224
             ||||||||||||||||||||
Sbjct: 39279 catgcatatgcatgcatgca 39260
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>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence
          Length = 207840

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   gcatatgcatgcatgcaggc 227
             ||||||||||||||||||||
Sbjct: 38549 gcatatgcatgcatgcaggc 38568
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>gb|AC159282.2| Mus musculus BAC clone RP23-329M17 from chromosome 12, complete sequence
          Length = 210571

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    gcatatgcatgcatgcaggc 227
              ||||||||||||||||||||
Sbjct: 195617 gcatatgcatgcatgcaggc 195636
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>gb|AY255629.1| Mus musculus Ret receptor protein (Ret) gene, promoter and partial
            cds
          Length = 4694

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 205  catgcatatgcatgcatgca 224
            ||||||||||||||||||||
Sbjct: 2626 catgcatatgcatgcatgca 2607
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>gb|AC048387.16| Homo sapiens chromosome 8, clone RP11-465K16, complete sequence
          Length = 193896

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   catgcatatgcatgcatgca 224
             ||||||||||||||||||||
Sbjct: 64683 catgcatatgcatgcatgca 64702
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>gb|AC026463.5| Homo sapiens chromosome 5 clone RP11-317I23, complete sequence
          Length = 169199

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    actgtaattaacacagcaac 100
             ||||||||||||||||||||
Sbjct: 54055 actgtaattaacacagcaac 54074
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 205      catgcatatgcatgcatgca 224
                ||||||||||||||||||||
Sbjct: 19360671 catgcatatgcatgcatgca 19360690
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 205      catgcatatgcatgcatgca 224
                ||||||||||||||||||||
Sbjct: 27626956 catgcatatgcatgcatgca 27626937
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>gb|AC079816.31| Mus musculus strain C57BL/6J chromosome 11 clone rp23-220f20, complete
              sequence
          Length = 172680

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    catgcatatgcatgcatgca 224
              ||||||||||||||||||||
Sbjct: 108474 catgcatatgcatgcatgca 108493
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>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0011H15
          Length = 130146

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   catgcatatgcatgcatgca 224
             ||||||||||||||||||||
Sbjct: 24300 catgcatatgcatgcatgca 24281
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>gb|AC010386.5|AC010386 Homo sapiens chromosome 5 clone CTD-2074B5, complete sequence
          Length = 101324

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    actgtaattaacacagcaac 100
             ||||||||||||||||||||
Sbjct: 82155 actgtaattaacacagcaac 82174
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>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0471A11
          Length = 157740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    atgcatatgcatgcatgcag 225
              ||||||||||||||||||||
Sbjct: 112158 atgcatatgcatgcatgcag 112139
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>dbj|AK111266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-F07, full
           insert sequence
          Length = 1032

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 atgcatatgcatgcatgcag 225
           ||||||||||||||||||||
Sbjct: 653 atgcatatgcatgcatgcag 672
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>gb|AC006031.2|AC006031 Homo sapiens BAC clone RP11-44G14 from 7q11.23-21.1, complete
            sequence
          Length = 170624

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 145  gggacatggagagggagggtgtgt 168
            |||||||||||||||||| |||||
Sbjct: 6302 gggacatggagagggaggttgtgt 6325
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>emb|AL513502.3|HS123J20 Homo sapiens chromosome 9 BAC RP11-123j20, complete sequence
          Length = 174636

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   atgcagctgctagcttggagtatc 138
             ||||||||||||| ||||||||||
Sbjct: 25964 atgcagctgctagtttggagtatc 25987
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>emb|CT025539.18| Mouse DNA sequence from clone RP23-221K23 on chromosome 12, complete
              sequence
          Length = 167603

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 197    tgcgcgcgcatgcatatgcatgca 220
              ||||||||||||||| ||||||||
Sbjct: 125170 tgcgcgcgcatgcatgtgcatgca 125193
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>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete
              sequence
          Length = 302665

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    catgcatatgcatgcatgca 224
              ||||||||||||||||||||
Sbjct: 121206 catgcatatgcatgcatgca 121187
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>emb|CT573093.3| CH250-1K10, complete sequence
          Length = 185363

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   gagtatctgggacgggacat 151
             ||||||||||||||||||||
Sbjct: 40629 gagtatctgggacgggacat 40648
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>emb|AL954325.8| Mouse DNA sequence from clone RP23-416H10 on chromosome 2, complete
              sequence
          Length = 195457

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 197    tgcgcgcgcatgcatatgcatgcatgca 224
              |||||||||||| | |||||||||||||
Sbjct: 112743 tgcgcgcgcatgtacatgcatgcatgca 112770
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>emb|AL450004.4|HS520K3 Homo sapiens chromosome 9 BAC RP11-520K3, complete sequence
          Length = 174662

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 115    atgcagctgctagcttggagtatc 138
              ||||||||||||| ||||||||||
Sbjct: 108132 atgcagctgctagtttggagtatc 108155
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>dbj|AB216157.1| Equus caballus DNA, microsatellite TKY2214
          Length = 238

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gcatgcatatgcatgcatgc 223
           ||||||||||||||||||||
Sbjct: 18  gcatgcatatgcatgcatgc 37
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>emb|AL626774.23| Mouse DNA sequence from clone RP23-198O15 on chromosome 4, complete
              sequence
          Length = 181545

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    catgcatatgcatgcatgca 224
              ||||||||||||||||||||
Sbjct: 117735 catgcatatgcatgcatgca 117754


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,758,744
Number of Sequences: 3902068
Number of extensions: 3758744
Number of successful extensions: 108907
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108189
Number of HSP's gapped (non-prelim): 718
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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