ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl04a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YL100_MIMIV (Q5UPH0) Putative ankyrin repeat protein L100 28 9.1

>YL100_MIMIV (Q5UPH0) Putative ankyrin repeat protein L100|
          Length = 602

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -2

Query: 189 EKMY--ILRIDKQKPDHFDPFIPYRHMTETFQEWSACSPDR 73
           +K+Y  ILR DK   DH   ++P  +  E FQ   +C P R
Sbjct: 3   QKIYFKILRFDKTHNDHV--YLPGENSVENFQTEGSCVPGR 41


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,196,053
Number of Sequences: 219361
Number of extensions: 1691095
Number of successful extensions: 3915
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3913
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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