>gb|AY107327.1| Zea mays PCO081246 mRNA sequence
          Length = 422

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 259 ggtagcgcggcgagggcgacgaggcc 284
           ||||||||||||||||||||||||||
Sbjct: 280 ggtagcgcggcgagggcgacgaggcc 305

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 262    agcgcggcgagggcgacgaggcc 284
              |||||||||||||||||||||||
Sbjct: 800961 agcgcggcgagggcgacgaggcc 800939

>gb|AC110238.10| Mus musculus chromosome 5, clone RP23-106D12, complete sequence
          Length = 197964

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 213    cgaactcttgttgccctagaac 234
              ||||||||||||||||||||||
Sbjct: 112606 cgaactcttgttgccctagaac 112585

>emb|AL049541.24|HSJ991B18 Human DNA sequence from clone RP5-991B18 on chromosome 20q13.11-13.3
             Contains a putative novel gene, ESTs, STSs and GSSs,
             complete sequence
          Length = 129874

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 181   acgtgtgagacccacacaatgc 202
             ||||||||||||||||||||||
Sbjct: 24456 acgtgtgagacccacacaatgc 24435

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 267     ggcgagggcgacgaggccgccg 288
               ||||||||||||||||||||||
Sbjct: 1950638 ggcgagggcgacgaggccgccg 1950617

>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
              complete sequence
          Length = 164577

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 271    agggcgacgaggccgccgccg 291
              |||||||||||||||||||||
Sbjct: 101316 agggcgacgaggccgccgccg 101296

>gb|AE005748.1| Caulobacter crescentus CB15 section 74 of 359 of the complete genome
          Length = 5664

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 263  gcgcggcgagggcgacgaggccgccgccg 291
            |||||||||||||| | ||||||||||||
Sbjct: 4553 gcgcggcgagggcgcccaggccgccgccg 4581

>gb|AC015855.13| Homo sapiens chromosome , clone CTC-480C19, complete sequence
          Length = 96963

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 383  ctcctgtcaatggcgcggaag 403
            |||||||||||||||||||||
Sbjct: 4527 ctcctgtcaatggcgcggaag 4547

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 271      agggcgacgaggccgccgccg 291
                |||||||||||||||||||||
Sbjct: 25374757 agggcgacgaggccgccgccg 25374737

>gb|AF218397.1|AF218397 Echinodontium tinctorium internal transcribed spacer 1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer 2,
           complete sequence
          Length = 533

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 302 cgggggcgtgggacttggacttgga 326
           |||| ||||||||||||||||||||
Sbjct: 366 cgggagcgtgggacttggacttgga 390

>gb|AC019319.9|AC019319 Homo sapiens chromosome 17, clone RP11-220N20, complete sequence
          Length = 41860

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 383   ctcctgtcaatggcgcggaag 403
             |||||||||||||||||||||
Sbjct: 16931 ctcctgtcaatggcgcggaag 16951

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 263    gcgcggcgagggcgacgaggccgccgccg 291
              |||||||||||||||||| ||| ||||||
Sbjct: 924837 gcgcggcgagggcgacgacgccaccgccg 924809

>dbj|AB097904.1| Streptomyces carzinostaticus DNA, biosynthetic gene cluster for
             antitumor antibiotic Neocarzilin, complete and partial cds
          Length = 33079

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 266   cggcgagggcgacgaggccgccgcc 290
             |||||||| ||||||||||||||||
Sbjct: 28648 cggcgaggtcgacgaggccgccgcc 28672

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 263     gcgcggcgagggcgacgagg 282
               ||||||||||||||||||||
Sbjct: 2457234 gcgcggcgagggcgacgagg 2457215

>gb|AC156952.22| Mus musculus 10 BAC RP24-385D2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 179140

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   tgagacccacacaatgccac 205
             ||||||||||||||||||||
Sbjct: 92069 tgagacccacacaatgccac 92050

>ref|XM_549926.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gcggtagcgcggcgagggcg 276
           ||||||||||||||||||||
Sbjct: 216 gcggtagcgcggcgagggcg 197

>ref|XM_868993.1| PREDICTED: Bos taurus hepatocyte growth factor (HGF), mRNA
          Length = 2181

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 70   aggtaaatgaattgtactaacaaa 93
            |||||||| |||||||||||||||
Sbjct: 1707 aggtaaatcaattgtactaacaaa 1684

>ref|NM_001031751.1| Bos taurus hepatocyte growth factor (HGF), mRNA
          Length = 2492

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 70   aggtaaatgaattgtactaacaaa 93
            |||||||| |||||||||||||||
Sbjct: 1940 aggtaaatcaattgtactaacaaa 1917

>ref|XM_499858.1| Yarrowia lipolytica CLIB122, YALI0A07997g predicted mRNA
          Length = 4248

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 276 gacgaggccgccgccggtgaggcg 299
           ||||||||| ||||||||||||||
Sbjct: 782 gacgaggccaccgccggtgaggcg 759

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 284     cgccgccggtgaggcggccg 303
               ||||||||||||||||||||
Sbjct: 2455571 cgccgccggtgaggcggccg 2455590

>emb|Y11548.1|SPSNBCDE S.pristinaespiralis snbC gene & snbDE gene
          Length = 22449

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   cgccgccggtgaggcggccg 303
             ||||||||||||||||||||
Sbjct: 18525 cgccgccggtgaggcggccg 18506

>emb|X98690.1|SPSNBCGEN S.pristinaespiralis snbC and snbDE genes
          Length = 22449

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   cgccgccggtgaggcggccg 303
             ||||||||||||||||||||
Sbjct: 18525 cgccgccggtgaggcggccg 18506

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    cgccgccggtgaggcggccg 303
              ||||||||||||||||||||
Sbjct: 307254 cgccgccggtgaggcggccg 307273

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     cgagggcgacgaggccgccg 288
               ||||||||||||||||||||
Sbjct: 2789683 cgagggcgacgaggccgccg 2789664

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    gcggtagcgcggcgagggcg 276
              ||||||||||||||||||||
Sbjct: 933877 gcggtagcgcggcgagggcg 933896

>ref|NM_001009830.1| Felis catus hepatocyte growth factor (HGF), mRNA
          Length = 3460

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 70   aggtaaatgaattgtactaacaaa 93
            |||||||| |||||||||||||||
Sbjct: 1876 aggtaaatcaattgtactaacaaa 1853

>gb|AC073066.5| Homo sapiens BAC clone RP11-149P12 from 2, complete sequence
          Length = 169286

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    taaatgaattgtactaacaaagga 96
             |||| |||||||||||||||||||
Sbjct: 92842 taaaggaattgtactaacaaagga 92865

>dbj|AP002747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698G03
          Length = 147857

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   gcggtagcgcggcgagggcg 276
             ||||||||||||||||||||
Sbjct: 69322 gcggtagcgcggcgagggcg 69341

>dbj|AB080187.1| Felis catus HGF mRNA for hepatocyte growth factor, complete cds
          Length = 3460

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 70   aggtaaatgaattgtactaacaaa 93
            |||||||| |||||||||||||||
Sbjct: 1876 aggtaaatcaattgtactaacaaa 1853

>dbj|AB110822.1| Bos taurus hgf mRNA for hepatocyte growth factor, complete cds
          Length = 2492

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 70   aggtaaatgaattgtactaacaaa 93
            |||||||| |||||||||||||||
Sbjct: 1940 aggtaaatcaattgtactaacaaa 1917

>gb|DQ333394.1| Cervid herpesvirus 2 glycoprotein D gene, complete cds
          Length = 1243

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 269  cgagggcgacgaggccgccgccgg 292
            |||||||||||||| |||||||||
Sbjct: 1018 cgagggcgacgagggcgccgccgg 1041

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 273     ggcgacgaggccgccgccgg 292
               ||||||||||||||||||||
Sbjct: 2179747 ggcgacgaggccgccgccgg 2179766

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 230    agaacatggccgcggccatgatcg 253
              ||||||| ||||||||||||||||
Sbjct: 308355 agaacatcgccgcggccatgatcg 308332

>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 276    gacgaggccgccgccggtgaggcg 299
              ||||||||| ||||||||||||||
Sbjct: 765790 gacgaggccaccgccggtgaggcg 765813

>dbj|D12693.1|STMBLAC S. lavendulae bla gene for beta-lactamase, complete cds
          Length = 2775

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tggccgcggccatgatcgcc 255
            ||||||||||||||||||||
Sbjct: 1171 tggccgcggccatgatcgcc 1152

>dbj|AB046610.1| Felis catus mRNA for hepatocyte growth factor HGF, complete cds
          Length = 2257

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 70   aggtaaatgaattgtactaacaaa 93
            |||||||| |||||||||||||||
Sbjct: 1868 aggtaaatcaattgtactaacaaa 1845


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,938,413
Number of Sequences: 3902068
Number of extensions: 2938413
Number of successful extensions: 61035
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60215
Number of HSP's gapped (non-prelim): 820
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)