>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence
          Length = 77136

 Score =  823 bits (415), Expect = 0.0
 Identities = 415/415 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1     ccaaataattgcctcatccattaaacaagaaacagagaattgtccaattaattttaaaaa 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58943 ccaaataattgcctcatccattaaacaagaaacagagaattgtccaattaattttaaaaa 58884

                                                                         
Query: 61    acaacgatttatcacataataacggcagtagattatgtacgctatggtggcaacgcacag 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58883 acaacgatttatcacataataacggcagtagattatgtacgctatggtggcaacgcacag 58824

                                                                         
Query: 121   ggcttcattccgacacccaaaaggcaccacggcacacgcaccagaaataaacatcaaaac 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58823 ggcttcattccgacacccaaaaggcaccacggcacacgcaccagaaataaacatcaaaac 58764

                                                                         
Query: 181   agttccaaaagacgcagcggggcacaacctgcctttcatacaacagcacgaatacagttt 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58763 agttccaaaagacgcagcggggcacaacctgcctttcatacaacagcacgaatacagttt 58704

                                                                         
Query: 241   cggctgtccccgtcatgcattcttactaggaaaccctgtacaacgctgggttacacctta 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58703 cggctgtccccgtcatgcattcttactaggaaaccctgtacaacgctgggttacacctta 58644

                                                                         
Query: 301   cagtccaaaatctcagagagctccctaccgagttttgccttccacggccttcagttaata 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58643 cagtccaaaatctcagagagctccctaccgagttttgccttccacggccttcagttaata 58584

                                                                    
Query: 361   cacgcatatataggctcaggagaaactgggagcaccctccgtccgttcccttgct 415
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58583 cacgcatatataggctcaggagaaactgggagcaccctccgtccgttcccttgct 58529

>gb|AC100782.2| Homo sapiens, clone RP11-300E4, complete sequence
          Length = 185123

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 47    attaattttaaaaaacaacgattta 71
             |||||||||||||||||| ||||||
Sbjct: 77629 attaattttaaaaaacaaggattta 77605

>gb|AC009487.3| Homo sapiens BAC clone RP11-334E15 from 2, complete sequence
          Length = 183666

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 40   ttgtccaattaattttaaaaaacaa 64
            |||| ||||||||||||||||||||
Sbjct: 1447 ttgttcaattaattttaaaaaacaa 1471

>gb|AC166159.2| Mus musculus BAC clone RP24-129B16 from chromosome 15, complete sequence
          Length = 216481

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 167    ataaacatcaaaacagttccaaaa 190
              |||||||||||||||| |||||||
Sbjct: 155263 ataaacatcaaaacagctccaaaa 155286

>gb|AC132837.11| Mus musculus chromosome 18, clone RP24-490M12, complete sequence
          Length = 139563

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    taattttaaaaaacaacgatttat 72
             |||||||||||||||| |||||||
Sbjct: 16494 taattttaaaaaacaaagatttat 16517

>gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, complete sequence
          Length = 218875

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 167  ataaacatcaaaacagttccaaaa 190
            |||||||||||||||| |||||||
Sbjct: 1439 ataaacatcaaaacagctccaaaa 1462

>gb|AC132437.3| Mus musculus BAC clone RP23-230M17 from chromosome 5, complete sequence
          Length = 176825

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    taattttaaaaaacaacgatttat 72
             |||||||||||||||| |||||||
Sbjct: 96695 taattttaaaaaacaatgatttat 96718

>ref|XM_660717.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.50327)
           partial mRNA
          Length = 303

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 atcaaaacagttccaaaaga 192
           ||||||||||||||||||||
Sbjct: 202 atcaaaacagttccaaaaga 221

>ref|XM_792835.1| PREDICTED: Strongylocentrotus purpuratus similar to coagulation
           factor V precursor (LOC593356), mRNA
          Length = 930

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 282 aacgctgggttacaccttacagtc 305
           |||||||||||||| |||||||||
Sbjct: 719 aacgctgggttacagcttacagtc 742

>emb|AL353717.13| Human DNA sequence from clone RP11-562M8 on chromosome 9 Contains a
             novel pseudogene, a argininosuccinate synthetase (ASS)
             (CTLN1) pseudogene, the APTX gene for aprataxin, a
             transcription elongation factor A (SII), 1 pseudogene
             (GTF2SP) (TCEA1P) and 2 CpG islands, complete sequence
          Length = 120533

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tccattaaacaagaaacaga 36
             ||||||||||||||||||||
Sbjct: 21360 tccattaaacaagaaacaga 21379

>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence
          Length = 198872

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    aattaattttaaaaaacaac 65
             ||||||||||||||||||||
Sbjct: 65294 aattaattttaaaaaacaac 65275

>emb|CR450749.7| Zebrafish DNA sequence from clone DKEY-2J6 in linkage group 5, complete
              sequence
          Length = 142889

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aattgcctcatccattaaac 26
              ||||||||||||||||||||
Sbjct: 118322 aattgcctcatccattaaac 118341

>gb|AC138593.14| Mus musculus chromosome 8, clone RP24-280K15, complete sequence
          Length = 169176

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    cttactaggaaaccctgtac 281
              ||||||||||||||||||||
Sbjct: 159652 cttactaggaaaccctgtac 159633

>emb|CR391924.9| Zebrafish DNA sequence from clone CH211-135F11 in linkage group 5,
             complete sequence
          Length = 142997

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     aattgcctcatccattaaac 26
             ||||||||||||||||||||
Sbjct: 97628 aattgcctcatccattaaac 97647

>gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome 5, complete sequence
          Length = 220137

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 49   taattttaaaaaacaacgatttat 72
            |||||||||||||||| |||||||
Sbjct: 2252 taattttaaaaaacaatgatttat 2275

>gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 217249

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   catgcattcttactaggaaa 273
             ||||||||||||||||||||
Sbjct: 88005 catgcattcttactaggaaa 88024

>gb|AC096576.3| Homo sapiens BAC clone RP11-556G22 from 4, complete sequence
          Length = 213044

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    ttaaacaagaaacagagaat 40
             ||||||||||||||||||||
Sbjct: 74762 ttaaacaagaaacagagaat 74743

>emb|BX572641.10| Zebrafish DNA sequence from clone CH211-213N22 in linkage group 12,
              complete sequence
          Length = 183309

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    gaaataaacatcaaaacagt 183
              ||||||||||||||||||||
Sbjct: 166637 gaaataaacatcaaaacagt 166618

>gb|AC154881.6| Mus musculus chromosome 15, clone RP24-259H19, complete sequence
          Length = 180231

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    tcaaaacagttccaaaagac 193
              ||||||||||||||||||||
Sbjct: 103648 tcaaaacagttccaaaagac 103629

>gb|AC015553.21|AC015553 Homo sapiens 9 BAC RP11-100N10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162063

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tccattaaacaagaaacaga 36
              ||||||||||||||||||||
Sbjct: 136069 tccattaaacaagaaacaga 136088

>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence
          Length = 217844

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    ttaaacaagaaacagagaat 40
             ||||||||||||||||||||
Sbjct: 51936 ttaaacaagaaacagagaat 51917

>gb|AC117941.6| Felis catus clone RP86-565O15, complete sequence
          Length = 106621

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    ccaattaattttaaaaaaca 63
             ||||||||||||||||||||
Sbjct: 64684 ccaattaattttaaaaaaca 64703

>gb|AC099713.5| Mus musculus chromosome 15, clone RP23-447B6, complete sequence
          Length = 199130

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    aaaatctcagagagctccct 326
              ||||||||||||||||||||
Sbjct: 165350 aaaatctcagagagctccct 165331

>emb|AL732520.14| Mouse DNA sequence from clone RP23-123E1 on chromosome 4, complete
              sequence
          Length = 167166

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     aattaattttaaaaaacaac 65
              ||||||||||||||||||||
Sbjct: 145077 aattaattttaaaaaacaac 145096

>gb|AC140277.3| Mus musculus BAC clone RP23-336O18 from 5, complete sequence
          Length = 198919

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     aattaattttaaaaaacaac 65
              ||||||||||||||||||||
Sbjct: 194977 aattaattttaaaaaacaac 194958

>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    gttttgccttccacggcctt 351
              ||||||||||||||||||||
Sbjct: 379195 gttttgccttccacggcctt 379176

>gb|AC168051.3| Mus musculus BAC clone RP23-169M5 from chromosome 8, complete sequence
          Length = 222981

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    cttactaggaaaccctgtac 281
              ||||||||||||||||||||
Sbjct: 157371 cttactaggaaaccctgtac 157390


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,070,256
Number of Sequences: 3902068
Number of extensions: 4070256
Number of successful extensions: 91951
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91884
Number of HSP's gapped (non-prelim): 67
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)