>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
 Frame = +3

Query: 102  PPTNIAMEDPAV--IQQKIGSPLQKLLETKLAKNLMFPSFLLLDISTETISSGCTRXXXX 275
            PP+ + +E P +  +QQ +  P+Q +L    +      +  ++++    + S C+     
Sbjct: 3503 PPSPVKIEPPTISKLQQPLVQPVQTVLPAPHSTGSGISANSVINLDLSNVISSCSN--TS 3560

Query: 276  XXXXXXXXNLSVSFCIEVVYQRYSRQASKVNSNPVMP 386
                    + S+SF      Q    QAS     P+ P
Sbjct: 3561 AASATASASASISFGSPTASQNAMPQASTPKQGPITP 3597

>CSH2_MESAU (P14059) Chorionic somatomammotropin hormone 2 precursor (Placental|
           lactogen II) (PL-II)
          Length = 221

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 2   PKHALHNAYRFIKYSSHCHHELSARVFTD 88
           P+ +  N Y+ +   SHC H+L+++VFTD
Sbjct: 34  PRLSTRNLYQRVVELSHCTHDLASKVFTD 62

>GAL1_LACPL (Q88SE8) Galactokinase (EC 2.7.1.6) (Galactose kinase)|
          Length = 387

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -3

Query: 466 ASKISVHFN-DLLGQRALAYTDTSWKRPGMTGLLLT 362
           AS +S+HF+ ++ G+      +T+WK+PG+ G  +T
Sbjct: 302 ASHVSLHFDYEVTGKELDTLAETAWKQPGVLGARMT 337

>IAAC1_WHEAT (P16850) Alpha-amylase/trypsin inhibitor CM1 precursor|
           (Chloroform/methanol-soluble protein CM1)
          Length = 145

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 313 VSVSRSYIKDIPGKHPRSIAILSCLDASMMCRCKRV 420
           +S+S S +   PG  PR        DAS  CRC+ V
Sbjct: 55  ISISGSAVSTEPGNTPRDRCCKELYDASQHCRCEAV 90

>CI097_PONPY (Q5RCP1) Protein C9orf97 homolog|
          Length = 516

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +2

Query: 26  YRFIKYSSHCHHELSARVFTDV--MSVSAN*YRNGRPSSYTAKNR-KSFTEAFRNQARQK 196
           ++  K  +HC  EL   VF ++  M +S       +P  + +        E F +QA Q+
Sbjct: 242 FKTSKGGAHCFPELRVGVFEEIVPMGISPKKISYKKPGIHLSPGEFHKEVEKFLSQANQE 301

Query: 197 FNVPILLVVRHFYRNNFFR 253
            +  ILL  R+FY +   R
Sbjct: 302 QSDTILLDCRNFYESKIGR 320

>CI097_HUMAN (Q5T7W7) Protein C9orf97|
          Length = 516

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +2

Query: 26  YRFIKYSSHCHHELSARVFTDV--MSVSAN*YRNGRPSSYTAKNR-KSFTEAFRNQARQK 196
           ++  K  +HC  EL   VF ++  M +S       +P  + +        E F +QA Q+
Sbjct: 242 FKTSKGGAHCFPELRVGVFEEIVPMGISPKKISYKKPGIHLSPGEFHKEVEKFLSQANQE 301

Query: 197 FNVPILLVVRHFYRNNFFR 253
            +  ILL  R+FY +   R
Sbjct: 302 QSDTILLDCRNFYESKIGR 320

>EF2_DROME (P13060) Elongation factor 2 (EF-2)|
          Length = 843

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/66 (25%), Positives = 33/66 (50%)
 Frame = +2

Query: 155 KSFTEAFRNQARQKFNVPILLVVRHFYRNNFFRLYPQKTKKEMNAEIKEPKC*FLYRGRI 334
           K F+E +     +KF + ++ ++   +  NFF    +K +K+  A+ K   C ++    I
Sbjct: 228 KQFSEMYS----EKFKIDVVKLMNRLWGENFFNAKTKKWQKQKEADNKRSFCMYIL-DPI 282

Query: 335 SKIFQA 352
            K+F A
Sbjct: 283 YKVFDA 288

>JHD1_KLULA (Q6CIC9) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 478

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 274 KRNECRNKRT*VLVSVSRSYIKDIPGKHPRSIAILSCLD 390
           KRN  RNKR    ++++    K +  +HP + A L+C +
Sbjct: 94  KRNRLRNKRPIDYIALNEGNDKRLKHEHPHTQAFLACFE 132

>YXT2_CAEEL (Q18078) Hypothetical protein C18B2.2|
          Length = 356

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
 Frame = +2

Query: 14  LHNAYRFIKYSSHCHHELSARVFTDVMSVSAN*YRNGRP-------SSYTAKNRKSFTEA 172
           + N Y FI+YSS    EL   +F           R G P        +   KNRK+    
Sbjct: 262 MRNKYEFIRYSSDASKELMEDLFKIAR-------RQGIPEKELEYIENELTKNRKTSHTT 314

Query: 173 FRNQARQKF-----NVPILL--VVRHFYRNNFFRLYP 262
             + AR+ F       P+L+  VVR FY +     YP
Sbjct: 315 AYSPAREFFQRRLRESPLLMEYVVRMFYHDFVILNYP 351

>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
           (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
 Frame = +2

Query: 11  ALHNAYRFIKYSSHCHHELSARVFTDVMSVSAN*YRNGRPSS------YTAKNRK----- 157
           A  N  R  ++S++ HHE     F        + YR+ R  +      YT+++R      
Sbjct: 136 ASDNRERAYEHSAYGHHERGTGAFDRTRHYDQDYYRDPRERTLQHGLYYTSRSRSPNRFD 195

Query: 158 SFTEAFRNQARQKFNVPILLVVRHFYRNNFFR 253
           +    +  +AR++F +P  +V R  YR++  R
Sbjct: 196 AHDPRYEPRAREQFTLP-SVVHRDIYRDDITR 226


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,400,190
Number of Sequences: 219361
Number of extensions: 1280156
Number of successful extensions: 3425
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3425
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)