ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl03h06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06, complete sequence Length = 142659 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 295 aaaagaacctaagtgttagtttctgtatcgaggtcgtata 334 ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 142401 aaaagaacctaagtgttagttcctgtgtcgaggtcgtata 142440 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 tagacatttctacagaaacaatttcttcaggt 254 ||||||||| |||| || |||||||||||||| Sbjct: 142345 tagacatttgtacacaagcaatttcttcaggt 142376
>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077L08, complete sequence Length = 115640 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 295 aaaagaacctaagtgttagtttctgtatcgaggtcgtata 334 ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 8446 aaaagaacctaagtgttagttcctgtgtcgaggtcgtata 8485 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 tagacatttctacagaaacaatttcttcaggt 254 ||||||||| |||| || |||||||||||||| Sbjct: 8390 tagacatttgtacacaagcaatttcttcaggt 8421
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 295 aaaagaacctaagtgttagtttctgtatcgaggtcgtata 334 ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1829672 aaaagaacctaagtgttagttcctgtgtcgaggtcgtata 1829711 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 tagacatttctacagaaacaatttcttcaggt 254 ||||||||| |||| || |||||||||||||| Sbjct: 1829616 tagacatttgtacacaagcaatttcttcaggt 1829647
>dbj|AK101319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034D15, full insert sequence Length = 2801 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 295 aaaagaacctaagtgttagtttctgtatcgaggtcgtata 334 ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 2596 aaaagaacctaagtgttagttcctgtgtcgaggtcgtata 2557 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 223 tagacatttctacagaaacaatttcttcaggt 254 ||||||||| |||| || |||||||||||||| Sbjct: 2652 tagacatttgtacacaagcaatttcttcaggt 2621
>dbj|AK060754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-G12, full insert sequence Length = 2282 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 295 aaaagaacctaagtgttagtttctgtatcgaggtcgtata 334 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 2194 aaaagaacctaagtgttagtccctgtgtcgaggtcgtata 2155 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 223 tagacatttctacagaaacaatttcttcaggt 254 ||||||||| |||| || |||||||||||||| Sbjct: 2250 tagacatttgtacacaagcaatttcttcaggt 2219
>ref|XM_422091.1| PREDICTED: Gallus gallus similar to IQ calmodulin-binding motif containing protein 1 (LOC424242), mRNA Length = 2009 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 ggtcaatagcaatcctgtcat 382 ||||||||||||||||||||| Sbjct: 483 ggtcaatagcaatcctgtcat 503
>emb|AJ577265.1|QRO577265 Quercus robur partial mRNA for pheromone receptor-like protein (ORF1) Length = 783 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 ttatacagcaaaaaataggaa 156 ||||||||||||||||||||| Sbjct: 626 ttatacagcaaaaaataggaa 606
>emb|AL928807.3| Mouse DNA sequence from clone RP23-97D20 on chromosome 2, complete sequence Length = 99202 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 ctacagaaacaatttcttcag 252 ||||||||||||||||||||| Sbjct: 22072 ctacagaaacaatttcttcag 22092
>gb|AC104554.7| Mus musculus chromosome 5, clone RP24-441E22, complete sequence Length = 176408 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 aatgttcccatccttcttgt 219 |||||||||||||||||||| Sbjct: 124121 aatgttcccatccttcttgt 124102
>ref|NM_112820.2| Arabidopsis thaliana unknown protein AT3G19330 transcript variant AT3G19330.1 mRNA, complete cds Length = 1497 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ttcccatccttcttgttgtt 223 |||||||||||||||||||| Sbjct: 834 ttcccatccttcttgttgtt 853
>ref|NM_112684.2| Arabidopsis thaliana ATHAL3A AT3G18030 (ATHAL3A) mRNA, complete cds Length = 1148 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tagacatttctacagaaaca 242 |||||||||||||||||||| Sbjct: 1128 tagacatttctacagaaaca 1109
>gb|AC004764.1| Homo sapiens chromosome 5, P1 clone 255g5 (LBNL H61), complete sequence Length = 68048 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 39644 gaaatgaatgcagaaataaa 39625
>gb|AC158943.9| Mus musculus chromosome 1, clone RP24-272N10, complete sequence Length = 186003 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tgaatgcagaaataaaagaa 301 |||||||||||||||||||| Sbjct: 32586 tgaatgcagaaataaaagaa 32567
>gb|AC149756.4| Bos taurus BAC CH240-361I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 182955 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ccactgtcatcatgaattat 68 |||||||||||||||||||| Sbjct: 167328 ccactgtcatcatgaattat 167347
>gb|BT014781.1| Arabidopsis thaliana At3g18030 gene, complete cds Length = 886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tagacatttctacagaaaca 242 |||||||||||||||||||| Sbjct: 863 tagacatttctacagaaaca 844
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 aaatgaatgcagaaataaaa 298 |||||||||||||||||||| Sbjct: 112592 aaatgaatgcagaaataaaa 112573
>gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome 19, complete sequence Length = 159681 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 agacatttctacagaaacaa 243 |||||||||||||||||||| Sbjct: 16995 agacatttctacagaaacaa 17014
>gb|AC134830.2| Mus musculus BAC clone RP24-498G16 from chromosome 19, complete sequence Length = 155666 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 agacatttctacagaaacaa 243 |||||||||||||||||||| Sbjct: 40864 agacatttctacagaaacaa 40845
>gb|AC092107.5| Homo sapiens BAC clone RP11-755J8 from UL, complete sequence Length = 137617 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 109733 gaaatgaatgcagaaataaa 109752
>gb|AC092441.4| Homo sapiens BAC clone RP11-455K24 from 7, complete sequence Length = 50221 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 43048 gaaatgaatgcagaaataaa 43029
>gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, complete sequence Length = 207781 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ttacagaagcttttagaaac 181 |||||||||||||||||||| Sbjct: 191917 ttacagaagcttttagaaac 191898
>emb|CR391905.6| Zebrafish DNA sequence from clone DKEY-16P7 in linkage group 9, complete sequence Length = 221511 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 tttacagaagcttttagaaa 180 |||||||||||||||||||| Sbjct: 34640 tttacagaagcttttagaaa 34621
>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1) gene, complete cds Length = 169976 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ttcccatccttcttgttgtt 223 |||||||||||||||||||| Sbjct: 88895 ttcccatccttcttgttgtt 88914
>emb|AL354726.17| Human DNA sequence from clone RP11-535C21 on chromosome 9 Contains 5' end of HEMGN gene for hemogen, the ANP32B gene for acidic (leucine-rich) nuclear phosphoprotein 32 family, member B and a CpG island, complete sequence Length = 82316 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 8086 gaaatgaatgcagaaataaa 8067
>emb|AL139413.11| Human DNA sequence from clone RP5-1033K19 on chromosome 1 Contains a transcription elongation factor B (SIII) polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, a pseudogene similar to part of BET1 homolog (S. cerevisiae) (BET1), the RPE65 gene for 65kDa retinal pigment epithelium-specific protein and the 3' end of the gene for cell cycle control protein SDP35 (SDP35), complete sequence Length = 103139 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 aaaaaataggaagtccttta 164 |||||||||||||||||||| Sbjct: 42304 aaaaaataggaagtccttta 42285
>emb|AL133255.14| Human DNA sequence from clone RP11-239L20 on chromosome 6 Contains the gene for a novel protein similar to spinal muscular atrophy region protein SMA3, a beta glucuronidase (GUSB) pseudogene, a pseudogene similar to nuclear envelope pore membrane protein POM121 (NUP121) ESTs, STSs, GSSs and a CpG island, complete sequence Length = 152782 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 152332 gaaatgaatgcagaaataaa 152351
>gb|AC104890.16| Mus musculus chromosome 1, clone RP23-260J11, complete sequence Length = 211081 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tgaatgcagaaataaaagaa 301 |||||||||||||||||||| Sbjct: 137404 tgaatgcagaaataaaagaa 137385
>emb|AJ271736.1|HSA271736 Homo sapiens Xq pseudoautosomal region; segment 2/2 Length = 158661 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 61714 gaaatgaatgcagaaataaa 61695
>gb|AC090701.5| Homo sapiens chromosome 18, clone RP11-810M21, complete sequence Length = 188779 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 tttctacagaaacaatttct 248 |||||||||||||||||||| Sbjct: 27194 tttctacagaaacaatttct 27213
>gb|AC118562.3| Homo sapiens BAC clone RP11-454O15 from 4, complete sequence Length = 178014 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaaagaa 301 |||||||| ||||||||||||||| Sbjct: 113228 gaaatgaaggcagaaataaaagaa 113205
>gb|AC104110.2| Homo sapiens chromosome 5 clone RP11-160A17, complete sequence Length = 165636 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 8968 gaaatgaatgcagaaataaa 8949
>gb|AC114787.5| Homo sapiens BAC clone RP11-642C3 from 4, complete sequence Length = 38357 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 acatttctacagaaacaatt 245 |||||||||||||||||||| Sbjct: 11739 acatttctacagaaacaatt 11758
>gb|AC113418.2| Homo sapiens chromosome 5 clone RP11-574H6, complete sequence Length = 182740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 55868 gaaatgaatgcagaaataaa 55887
>gb|AC026123.24| Homo sapiens 16 BAC RP11-174D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170088 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 155005 gaaatgaatgcagaaataaa 155024
>gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, complete sequence Length = 216172 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 110811 gaaatgaatgcagaaataaa 110830
>gb|AC040927.18| Mus musculus chromosome 5, clone RP23-186A21, complete sequence Length = 206156 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 aatgttcccatccttcttgt 219 |||||||||||||||||||| Sbjct: 84885 aatgttcccatccttcttgt 84866
>gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, complete sequence Length = 67124 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 20239 gaaatgaatgcagaaataaa 20258
>gb|AC007948.3|AC007948 Genomic sequence of Homo sapiens clone R417F14A from chromosome 18, complete sequence Length = 99128 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tttctacagaaacaatttct 248 |||||||||||||||||||| Sbjct: 41704 tttctacagaaacaatttct 41685
>gb|AC079308.15| Homo sapiens 3 BAC RP11-57P12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171779 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 31218 gaaatgaatgcagaaataaa 31199
>gb|AC148677.1| Macaca mulatta Major Histocompatibility Complex BAC MMU122H23, complete sequence Length = 180610 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 100038 gaaatgaatgcagaaataaa 100019
>gb|AC022108.4|AC022108 Homo sapiens chromosome 5 clone CTC-426B10, complete sequence Length = 235599 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 10808 gaaatgaatgcagaaataaa 10789
>emb|BX824084.1|CNS0A5JM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH20ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ttcccatccttcttgttgtt 223 |||||||||||||||||||| Sbjct: 835 ttcccatccttcttgttgtt 854
>gb|AC079755.6| Homo sapiens BAC clone RP11-85L2 from 4, complete sequence Length = 184471 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 69492 gaaatgaatgcagaaataaa 69473
>gb|AC069205.6| Homo sapiens BAC clone RP11-735P12 from 2, complete sequence Length = 132242 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 114054 gaaatgaatgcagaaataaa 114073
>gb|AC097536.3| Homo sapiens BAC clone RP11-803N5 from 2, complete sequence Length = 194553 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 32767 gaaatgaatgcagaaataaa 32786
>gb|AC129946.9| Mus musculus chromosome 5, clone RP24-512F21, complete sequence Length = 141041 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ttacagaagcttttagaaac 181 |||||||||||||||||||| Sbjct: 73889 ttacagaagcttttagaaac 73908
>gb|AC010884.11| Homo sapiens BAC clone RP11-350B7 from 2, complete sequence Length = 137172 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 27485 gaaatgaatgcagaaataaa 27466
>gb|AC104788.5| Homo sapiens BAC clone RP11-128I4 from 2, complete sequence Length = 123023 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 118110 gaaatgaatgcagaaataaa 118129
>gb|AC008670.6| Homo sapiens chromosome 5 clone CTB-36O1, complete sequence Length = 126034 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 9081 gaaatgaatgcagaaataaa 9100
>gb|AC009300.2| Homo sapiens BAC clone RP11-52A21 from 2, complete sequence Length = 109939 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 90646 gaaatgaatgcagaaataaa 90627
>gb|AC093011.3| Homo sapiens X BAC RP11-40P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148548 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 60658 gaaatgaatgcagaaataaa 60677
>gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N11, complete sequence Length = 83029 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 17384 gaaatgaatgcagaaataaa 17365
>gb|AC016577.4|AC016577 Homo sapiens chromosome 5 clone CTB-69E10, complete sequence Length = 77654 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 atccaaggtcaatagcaatc 375 |||||||||||||||||||| Sbjct: 16975 atccaaggtcaatagcaatc 16956
>gb|AC008967.3|AC008967 Homo sapiens chromosome 5 clone CTD-2367A17, complete sequence Length = 88958 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 82206 gaaatgaatgcagaaataaa 82187
>dbj|AB026641.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBG14 Length = 6588 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tagacatttctacagaaaca 242 |||||||||||||||||||| Sbjct: 3290 tagacatttctacagaaaca 3309
>dbj|AB025624.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLD14 Length = 83097 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ttcccatccttcttgttgtt 223 |||||||||||||||||||| Sbjct: 13521 ttcccatccttcttgttgtt 13540
>gb|AC007344.3|AC007344 Homo sapiens chromosome 16 clone RPCI-11_466G2, complete sequence Length = 180827 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 50591 gaaatgaatgcagaaataaa 50610
>gb|AC005993.2|AC005993 Homo sapiens PAC clone RP6-114E22 from 14, complete sequence Length = 143943 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 138001 gaaatgaatgcagaaataaa 137982
>gb|AC005076.2|AC005076 Homo sapiens BAC clone CTA-227L24 from 7q21.1-q21.2, complete sequence Length = 158146 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 111032 gaaatgaatgcagaaataaa 111013
>emb|AL512357.4|CNS07EF6 Human chromosome 14 DNA sequence BAC R-260M19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174612 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 34051 gaaatgaatgcagaaataaa 34070
>emb|AL391749.4|CNS06C8I Human chromosome 14 DNA sequence BAC R-233L14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195007 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 103146 gaaatgaatgcagaaataaa 103127
>emb|AL974314.21| Zebrafish DNA sequence from clone DKEY-89P3 in linkage group 9, complete sequence Length = 192510 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tttacagaagcttttagaaa 180 |||||||||||||||||||| Sbjct: 60245 tttacagaagcttttagaaa 60264
>gb|AC007631.3|AC007631 Genomic sequence of Homo sapiens clone R145D03A from chromosome 18, complete sequence Length = 146596 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tttctacagaaacaatttct 248 |||||||||||||||||||| Sbjct: 138479 tttctacagaaacaatttct 138460
>emb|AL359218.4|CNS05TEG Human chromosome 14 DNA sequence BAC R-55G7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 160718 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 47634 gaaatgaatgcagaaataaa 47653
>emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in linkage group 20, complete sequence Length = 213980 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 aaatgaatgcagaaataaaagaac 302 |||||||| ||||||||||||||| Sbjct: 147345 aaatgaatacagaaataaaagaac 147368
>emb|AL163152.4|CNS01RID Human chromosome 14 DNA sequence BAC R-98N22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 159772 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 7605 gaaatgaatgcagaaataaa 7586
>emb|AJ225782.1|HSSYBL16 Homo sapiens SYBL1 gene, exons 6-8 Length = 39163 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 24659 gaaatgaatgcagaaataaa 24640
>emb|AL512359.2|CNS07EF8 Human chromosome 14 DNA sequence BAC R-286B5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157395 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 60941 gaaatgaatgcagaaataaa 60960
>dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-681B3, complete sequence Length = 182424 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaatgaatgcagaaataaa 297 |||||||||||||||||||| Sbjct: 103253 gaaatgaatgcagaaataaa 103272 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,757,209 Number of Sequences: 3902068 Number of extensions: 4757209 Number of successful extensions: 103308 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103129 Number of HSP's gapped (non-prelim): 179 length of query: 495 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 473 effective length of database: 17,147,199,772 effective search space: 8110625492156 effective search space used: 8110625492156 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
