ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl03h03 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 90.9 bits (224), Expect = 1e-18 Identities = 42/52 (80%), Positives = 45/52 (86%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E +VV MN DP+LKNR GPAKFPYMLLYPNTSDH G A GLTA+GIPNSISI Sbjct: 811 ESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 81.6 bits (200), Expect = 6e-16 Identities = 39/52 (75%), Positives = 43/52 (82%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E +VV MN D LKNR GPA+FPYMLLYPNTSD TG A G+TA+GIPNSISI Sbjct: 815 EGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 81.3 bits (199), Expect = 8e-16 Identities = 37/52 (71%), Positives = 43/52 (82%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E +V+ MN DP LKNR GPA FPY L++PNTSD+ G AEG+TARGIPNSISI Sbjct: 812 ESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 79.7 bits (195), Expect = 2e-15 Identities = 38/52 (73%), Positives = 40/52 (76%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E +VVAMN DP KNR GP FPY LLYPNTSD G A GL+ARGIPNSISI Sbjct: 819 ESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 67.8 bits (164), Expect = 1e-11 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 1/53 (1%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQ-AEGLTARGIPNSISI 260 E ++ MN + LKNR GP K PYMLLYPNTSD T + +GLTA GIPNSISI Sbjct: 825 ENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 59.3 bits (142), Expect = 3e-09 Identities = 30/52 (57%), Positives = 36/52 (69%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 EK+++ N D L+NR GPAK PY LLYP++ EGLT RGIPNSISI Sbjct: 808 EKKLIEKNKDETLRNRYGPAKMPYTLLYPSSE------EGLTFRGIPNSISI 853
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 56.6 bits (135), Expect = 2e-08 Identities = 29/52 (55%), Positives = 34/52 (65%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E ++ A NSDP L+NRTGP + PY LL H EGLT +GIPNSISI Sbjct: 819 EGKINARNSDPSLRNRTGPVQLPYTLL------HRSSEEGLTFKGIPNSISI 864
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 56.6 bits (135), Expect = 2e-08 Identities = 28/52 (53%), Positives = 35/52 (67%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E+++ N+D L+NR GP K PY LLYP++ EGLT RGIPNSISI Sbjct: 821 EEKLTQRNNDESLRNRYGPVKMPYTLLYPSSE------EGLTCRGIPNSISI 866
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 56.2 bits (134), Expect = 3e-08 Identities = 28/52 (53%), Positives = 36/52 (69%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 EK++ N+D +L+NR GP + PY LLYP++ EGLT RGIPNSISI Sbjct: 816 EKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSK------EGLTFRGIPNSISI 861
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 55.1 bits (131), Expect = 6e-08 Identities = 27/52 (51%), Positives = 33/52 (63%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E++++ N D L+NR GP K PY +L P D EGLT RGIPNSISI Sbjct: 816 EEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCED-----EGLTFRGIPNSISI 862
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 54.3 bits (129), Expect = 1e-07 Identities = 27/52 (51%), Positives = 34/52 (65%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E+++ N+D L NR GP + PY LL+PN +EGLT RGIPNSISI Sbjct: 821 EEKLARKNNDQSLSNRLGPVQLPYTLLHPN-------SEGLTCRGIPNSISI 865
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 54.3 bits (129), Expect = 1e-07 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%) Frame = -1 Query: 415 EKQVVAMNSDPQLK-NRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E+++V N+DP L+ NR GP + PY LLYP++ EGLT RGIPNSISI Sbjct: 793 EEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSE------EGLTFRGIPNSISI 839
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 52.4 bits (124), Expect = 4e-07 Identities = 25/52 (48%), Positives = 33/52 (63%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E +++ MNS KNR+GP PY LL+P + EGLT +GIPNS+SI Sbjct: 814 ENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSE------EGLTGKGIPNSVSI 859
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 51.6 bits (122), Expect = 7e-07 Identities = 26/52 (50%), Positives = 34/52 (65%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E ++ N+DP L +R GP + PY LL+P++ EGLT RGIPNSISI Sbjct: 819 EAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSK------EGLTFRGIPNSISI 864
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 51.6 bits (122), Expect = 7e-07 Identities = 26/46 (56%), Positives = 32/46 (69%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 278 EK++V N+D L+NRTGPAK PY LLYP++ EGLT RGI Sbjct: 702 EKKLVQKNNDETLRNRTGPAKMPYTLLYPSSE------EGLTFRGI 741
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 51.2 bits (121), Expect = 9e-07 Identities = 25/52 (48%), Positives = 32/52 (61%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 EKQ++ N D L NR+GP PY LL+P + GLT +GIPNS+SI Sbjct: 816 EKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 861
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 51.2 bits (121), Expect = 9e-07 Identities = 26/52 (50%), Positives = 32/52 (61%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 EK + N D LKNRTG K PY LL+P++ G+T RGIPNS+SI Sbjct: 814 EKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG------GVTGRGIPNSVSI 859
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 50.8 bits (120), Expect = 1e-06 Identities = 26/52 (50%), Positives = 34/52 (65%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E ++ N+D +L+NR GP + PY LL P++ EGLT RGIPNSISI Sbjct: 812 ENKLSERNNDEKLRNRCGPVQMPYTLLLPSSK------EGLTFRGIPNSISI 857
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 50.1 bits (118), Expect = 2e-06 Identities = 25/52 (48%), Positives = 32/52 (61%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 EKQ++ N + L NRTGP PY LL+P + GLT +GIPNS+SI Sbjct: 815 EKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 860
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/52 (36%), Positives = 31/52 (59%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E+++ N+DP +NR G PY L+ P++ G+T RG+PNS++I Sbjct: 854 EEEIERRNADPSRRNRCGAGVLPYELMAPSS------GPGITCRGVPNSVTI 899
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 41.2 bits (95), Expect = 0.001 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Frame = -1 Query: 412 KQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTG----QAEGLTARGIPNSISI 260 +QV N+DP KNR G PY+LL P+ D T + + GIPNSISI Sbjct: 882 EQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 40.0 bits (92), Expect = 0.002 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = -1 Query: 415 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 E+ + N+D KNR G PY LL P++ G+T RG+PNSISI Sbjct: 873 EETIERRNADHGRKNRCGAGVLPYELLAPSS------PPGVTCRGVPNSISI 918
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 39.7 bits (91), Expect = 0.003 Identities = 22/45 (48%), Positives = 27/45 (60%) Frame = -1 Query: 394 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 N++P+ KNR G PY LL P + G+T RGIPNSISI Sbjct: 858 NNNPENKNRCGAGIVPYELLKPFSEP------GVTGRGIPNSISI 896
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 36.6 bits (83), Expect = 0.023 Identities = 20/45 (44%), Positives = 24/45 (53%) Frame = -1 Query: 394 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 N D +LKNR G PY L+ P + G+T GIPNS SI Sbjct: 886 NKDRKLKNRCGAGILPYQLMKPFSD------SGVTGMGIPNSTSI 924
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 36.2 bits (82), Expect = 0.031 Identities = 20/45 (44%), Positives = 24/45 (53%) Frame = -1 Query: 394 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 N D +LKNR G PY L+ P + G+T GIPNS SI Sbjct: 903 NKDRKLKNRCGAGILPYQLMKPFSD------AGVTGMGIPNSTSI 941
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 35.4 bits (80), Expect = 0.052 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = -1 Query: 412 KQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 +QV N D +NR G PY+LL P + + A+ + GIPNSISI Sbjct: 883 EQVEEWNKDDSRRNRHGAGVVPYVLLRP-LNGNPMDAKTVMEMGIPNSISI 932
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 32.3 bits (72), Expect = 0.44 Identities = 21/45 (46%), Positives = 25/45 (55%) Frame = -1 Query: 394 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 260 N + LKNR G Y LL P TS+H G+T G+P SISI Sbjct: 858 NVNITLKNRAGAGVVKYELLKP-TSEH-----GVTGMGVPYSISI 896
>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 582 Score = 31.2 bits (69), Expect = 0.99 Identities = 20/40 (50%), Positives = 23/40 (57%) Frame = +2 Query: 239 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 358 T DVL DG VR G +G+SR+V V EQH ELG Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476
>GCSP_PROAC (Q6A9R8) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 994 Score = 30.4 bits (67), Expect = 1.7 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 407 GGGHELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGH 279 GGG +GP A + H A +P H P++ P G GH Sbjct: 724 GGGPGVGPVAAKAHLAPFLPGHPLNPRNEHPLNDGGTVTHDGH 766
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 1.7 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 362 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 273 A P H A P L H +G HRQGHPE Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 1.7 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 362 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 273 A P H A P L H +G HRQGHPE Sbjct: 231 APNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 29.3 bits (64), Expect = 3.7 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = -3 Query: 386 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHIHL 258 P+ PHR +P H P+H PH H Q HP H H+ Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425
>FRIZ3_DROME (O77438) Protein frizzled-3 precursor (dFz3)| Length = 581 Score = 28.9 bits (63), Expect = 4.9 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Frame = -1 Query: 343 MLLYPNTSDHTGQ--AEGLTARGIPNSISI*SEHVRR---RDLMLLCYPCLLTPELACVC 179 M PN + HT Q AE A+ +P S S R L LC P + P AC Sbjct: 55 MTALPNLAGHTNQLEAELQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKL 114 Query: 178 VCDRELCRCMNN 143 +C+ CM N Sbjct: 115 LCETVRGECMEN 126
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = -3 Query: 404 GGHELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHIHLI*ARPSSRP 231 GG GP Q P G P ++P RP G G G G P + ++ RP++ P Sbjct: 262 GGQGGGPRPQAP--GGNRPSPGSMP---RPQGGGAGPRPGGGPRPNPGMMPQRPAAGP 314
>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (hN2) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2471 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%) Frame = -1 Query: 187 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 50 C+C C ++ C++N G CT GL G + L AG+ ++ V K Sbjct: 706 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDK 758
>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)| Length = 657 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/46 (30%), Positives = 19/46 (41%) Frame = -3 Query: 398 HELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHIH 261 H+ A H G+V H A H + HG + H H H+H Sbjct: 79 HQAPHQAHHHHHHGEVN-HQAPQVHQQVHGQDQAHHHHHHHHHHLH 123
>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (Motch B) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2470 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%) Frame = -1 Query: 187 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 50 C+C C ++ C++N G CT GL G + L AG+ ++ V K Sbjct: 704 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDK 756
>ALR1_SALTY (P0A1A3) Alanine racemase, biosynthetic (EC 5.1.1.1)| Length = 359 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 251 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 358 L S AVRD GEP+G GG WV + LG Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268
>ALR1_SALTI (P0A1A4) Alanine racemase, biosynthetic (EC 5.1.1.1)| Length = 359 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 251 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 358 L S AVRD GEP+G GG WV + LG Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,275,788 Number of Sequences: 219361 Number of extensions: 1296557 Number of successful extensions: 3667 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3514 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3636 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
