>WRN_CAEEL (Q19546) Probable Werner syndrome ATP-dependent helicase homolog 1|
            (EC 3.6.1.-)
          Length = 1056

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
 Frame = +2

Query: 59   CIITRTYHTGYRLTNPSTIDITPPELITSMQ---------VYTRMESTRTHIREEKMRTN 211
            C++  +  TG   TN +  D+ PPELI+ MQ         VYT    +R+  +E      
Sbjct: 875  CVVQFSKETGIA-TNVNANDMIPPELISKMQKVLSDAVRRVYTEHLISRSTAKEVATARG 933

Query: 212  RSSRTRWSFIEACSSCSGEEGTPL 283
             S  T +S++    + + E+G PL
Sbjct: 934  ISEGTVYSYL----AMAVEKGLPL 953

>STOX1_HUMAN (Q6ZVD7) Storkhead-box protein 1 (Winged helix domain-containing|
           protein)
          Length = 989

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
 Frame = +2

Query: 71  RTYHTG--YRLTNPSTIDITPPELITSMQVYTRMESTRTHIREEKMRTNRSSRTRWSFIE 244
           + YHTG  Y +  P T  IT           T  +  +  +  ++ R   +S T    +E
Sbjct: 176 KIYHTGEGYFIVTPQTYFITN----------TTTQENKRMLPSDESRLMPASMTYLVSME 225

Query: 245 ACSSCSGEEGTPLGHC 292
           +C+  + E   P+ HC
Sbjct: 226 SCAESAQENAAPISHC 241

>FANCJ_CHICK (Q3YK19) Fanconi anemia group J protein homolog (EC 3.6.1.-)|
           (ATP-dependent RNA helicase BRIP1) (Protein FACJ)
          Length = 1252

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 131 ELITSMQVYTRMESTRTHIREEKMRTNRSSRTRWSFIEACSSCSGEE 271
           +L+ +++VY + ++    +  EK   N S +T +S    CS  SG+E
Sbjct: 187 QLVDALEVYNQRKNGELIVHSEKSVKNTSPQTLFSSCTECSCSSGKE 233

>NPT2B_MOUSE (Q9DBP0) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 697

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -3

Query: 112 CARVG*AVACMICTCNNALACHCLASVLDYGNEE 11
           C RV   V CM+C C     C C     D G EE
Sbjct: 621 CCRVCCRVCCMVCGCK---CCRCSKCCRDQGEEE 651

>SAN1_YEAST (P22470) Protein SAN1|
          Length = 610

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +1

Query: 34  LKPSNGTPMHYYTYISYRLPPNQPEHN*HYSTGTHNQYASIHKNGIHKNTHPR 192
           L P NG P+H       RLPPN  + N      +  Q    +  G + N  PR
Sbjct: 359 LVPQNGQPLHN----PVRLPPNDSDRNGVNGPSSTTQNPPSNSGGSNNNQSPR 407

>HISX_ACIAD (Q6FEC8) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 430

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = +2

Query: 107 STIDITPPELITSMQVYTRMESTRTHIREEKMRTNRSSRTR--WSFIEACSSCSGEEGTP 280
           S +++T  +L T+ +  T        +  E++R+   ++ +  WS+++A  +  G++ TP
Sbjct: 65  SDLELTQEQLKTAFEALTAEIREALELAAERIRSFHQAQKQEGWSYVDALGNTLGQKVTP 124

Query: 281 L 283
           L
Sbjct: 125 L 125

>KGP24_DROME (Q03043) cGMP-dependent protein kinase, isozyme 2 forms|
           cD4/T1/T3A/T3B (EC 2.7.11.12) (CGK) (Foraging protein)
          Length = 1088

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 100 QPEHN*HYSTGTHNQYASIHKNGIHKNTHPRGKN---ENKSFLQNKMV 234
           Q E N +Y   T     SI  N  + NTHP G N    N S + N +V
Sbjct: 171 QQEPNANYQFPTDLGLVSIVNNNNNTNTHPSGSNSGSNNNSNINNNLV 218

>FLGH_PHOPR (Q6LTQ7) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 256

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 91  PPNQPEHN*HYSTGTHNQYASIHKNGIHKNTHPRG 195
           P  +PEH   Y+T T + ++SI    ++ +T PRG
Sbjct: 69  PQAKPEH---YATATGSLFSSIQAQDLYDDTKPRG 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,206,915
Number of Sequences: 219361
Number of extensions: 1041577
Number of successful extensions: 2897
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2896
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)