>gb|AC107780.12| Mus musculus chromosome 8, clone RP23-61O10, complete sequence
          Length = 244047

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 222    ctgtacaaaattgccatataaa 243
              ||||||||||||||||||||||
Sbjct: 174062 ctgtacaaaattgccatataaa 174041

>emb|AL158163.11| Human DNA sequence from clone RP11-348N5 on chromosome 10 Contains the 3'
              end of the PDCD4 gene for programmed cell death 4
              (neoplastic transformation inhibitor)(H731, MGC33046,
              MGC33047), a novel gene (LOC92482), the SHOC2 gene for
              soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8,
              SOC-2, SUR-8, KIAA0862, SIAA0862), ribosomal protein L13a
              pseudogene 6 (RPL13AP6), the ADRA2A gene for adrenergic,
              alpha-2A-, receptor (alpha-2AAR subtype C10)(ADRA2, ADRAR,
              ZNF32, ADRA2R) and two CpG islands, complete sequence
          Length = 204908

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     ctacaagtaacattcttctga 42
              |||||||||||||||||||||
Sbjct: 152592 ctacaagtaacattcttctga 152612

>gb|AC080003.6| Homo sapiens BAC clone RP11-344F9 from 4, complete sequence
          Length = 187936

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 189   tgtgaacacaaccaccaccac 209
             |||||||||||||||||||||
Sbjct: 23561 tgtgaacacaaccaccaccac 23541

>ref|XM_631580.1| Dictyostelium discoideum AX4 hypothetical protein (DDB0187989),
           partial mRNA
          Length = 2040

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 193 aacacaaccaccaccacaaca 213
           |||||||||||||||||||||
Sbjct: 190 aacacaaccaccaccacaaca 210

>gb|AC160059.7| Mus musculus 6 BAC RP23-172L21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 212292

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    aacacaaccaccaccacaaca 213
              |||||||||||||||||||||
Sbjct: 202722 aacacaaccaccaccacaaca 202702

>gb|AC156286.8| Mus musculus 6 BAC RP24-285N17 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 180204

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 193    aacacaaccaccaccacaaca 213
              |||||||||||||||||||||
Sbjct: 137034 aacacaaccaccaccacaaca 137054

>gb|AC170761.3| Rhesus Macaque CHR5 BAC CH250-342J4 (Children's Hospital Oakland
             Research Institute Rhesus macaque Adult Male BAC Library)
             complete sequence
          Length = 160607

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    ttgctacaagtaacattcttc 39
             |||||||||||||||||||||
Sbjct: 37831 ttgctacaagtaacattcttc 37851

>gb|AC183608.3| Pan troglodytes BAC clone CH251-271E16 from chromosome 7, complete
             sequence
          Length = 138895

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   aaatgtcaacacagccatct 376
             ||||||||||||||||||||
Sbjct: 93346 aaatgtcaacacagccatct 93365

>gb|AC147078.2| Pan troglodytes BAC clone RP43-180L22 from 7, complete sequence
          Length = 217576

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 230    aattgccatataaatcagcaatcc 253
              ||||||||||| ||||||||||||
Sbjct: 144864 aattgccatatgaatcagcaatcc 144887

>gb|AC105958.11| Mus musculus chromosome 9, clone RP24-325P4, complete sequence
          Length = 195129

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    acacaaccaccaccacaaca 213
              ||||||||||||||||||||
Sbjct: 150151 acacaaccaccaccacaaca 150132

>gb|AC034148.9| Homo sapiens BAC clone RP11-155B1 from 7, complete sequence
          Length = 170928

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 230  aattgccatataaatcagcaatcc 253
            ||||||||||| ||||||||||||
Sbjct: 1745 aattgccatatgaatcagcaatcc 1768

>gb|AC146014.2| Pan troglodytes BAC clone RP43-128N21 from 7, complete sequence
          Length = 178714

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    gctacaagtaacattcttct 40
             ||||||||||||||||||||
Sbjct: 94636 gctacaagtaacattcttct 94655

>gb|AC002451.1| Homo sapiens BAC clone GS1-306C12 from 7, complete sequence
          Length = 157099

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gtacaaaattgccatataaa 243
             ||||||||||||||||||||
Sbjct: 31612 gtacaaaattgccatataaa 31593

>gb|AC006381.2| Homo sapiens BAC clone RP11-494A9 from 7, complete sequence
          Length = 146720

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    gctacaagtaacattcttct 40
             ||||||||||||||||||||
Sbjct: 48199 gctacaagtaacattcttct 48218

>gb|AC111111.11| Mus musculus chromosome 3, clone RP23-201A9, complete sequence
          Length = 233326

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     aggaatcatagacacaatta 61
              ||||||||||||||||||||
Sbjct: 150091 aggaatcatagacacaatta 150072

>gb|AC152419.2| Pan troglodytes BAC clone RP43-4P10 from chromosome 7, complete
             sequence
          Length = 154622

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   aaatgtcaacacagccatct 376
             ||||||||||||||||||||
Sbjct: 51871 aaatgtcaacacagccatct 51890

>emb|AL626785.26| Mouse DNA sequence from clone RP23-220F20 on chromosome 11 Contains a
             novel gene, the 3'  end of the Mmd gene for monocyte to
             macrophage differentiation-associated and the 3' end of
             the Hlf gene for hepatic leukemia factor, complete
             sequence
          Length = 172696

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    gtaacattcttctgaggaat 47
             ||||||||||||||||||||
Sbjct: 34063 gtaacattcttctgaggaat 34044

>dbj|AB225899.1| Aspergillus oryzae cDNA, contig sequence: AoEST2754
          Length = 745

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 acaaccaccaccacaacaca 215
           ||||||||||||||||||||
Sbjct: 152 acaaccaccaccacaacaca 171

>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 196     acaaccaccaccacaacaca 215
               ||||||||||||||||||||
Sbjct: 1427060 acaaccaccaccacaacaca 1427041

>gb|AC104187.2| Homo sapiens chromosome 3 clone RP11-424N24, complete sequence
          Length = 186052

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    accaccaccacaacacagtt 218
              ||||||||||||||||||||
Sbjct: 146240 accaccaccacaacacagtt 146221

>gb|AC158660.4| Mus musculus 6 BAC RP23-387H1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 199439

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    acacaaccaccaccacaaca 213
              ||||||||||||||||||||
Sbjct: 126349 acacaaccaccaccacaaca 126330

>gb|AC079816.31| Mus musculus strain C57BL/6J chromosome 11 clone rp23-220f20, complete
             sequence
          Length = 172680

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    gtaacattcttctgaggaat 47
             ||||||||||||||||||||
Sbjct: 34132 gtaacattcttctgaggaat 34113

>gb|AC073435.26| Mus musculus strain C57BL/6J chromosome 9 clone rp23-383h20, complete
              sequence
          Length = 221953

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    acacaaccaccaccacaaca 213
              ||||||||||||||||||||
Sbjct: 167868 acacaaccaccaccacaaca 167887

>emb|AL672068.13| Mouse DNA sequence from clone RP23-69M9 on chromosome X, complete
              sequence
          Length = 217917

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 96     tcagtccaagtaagaataccatat 119
              |||||||||||| |||||||||||
Sbjct: 112201 tcagtccaagtatgaataccatat 112224



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    tcagtccaagtaagaataccatat 119
             |||||||||||| |||||||||||
Sbjct: 16002 tcagtccaagtatgaataccatat 15979


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,234,632
Number of Sequences: 3902068
Number of extensions: 3234632
Number of successful extensions: 61784
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61738
Number of HSP's gapped (non-prelim): 46
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)