ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl03g02 |
|---|---|
| Clone Library Name | barley_pub |
>UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-)| (Ubiquitin-protein ligase 2) Length = 3658 Score = 32.3 bits (72), Expect = 0.49 Identities = 20/49 (40%), Positives = 24/49 (48%) Frame = +2 Query: 197 VDPTSSRVGGGPATAPPPLDDARAVAVSQAPQCRVWRHRGGILPLAWTD 343 VDP S R+GGG APPPL D V + + R G+ WTD Sbjct: 2343 VDPFSDRLGGG--GAPPPLTDYSVVGMDSS--------RRGVGDSRWTD 2381
>TRH_DROME (Q24119) Protein trachealess| Length = 958 Score = 31.6 bits (70), Expect = 0.83 Identities = 22/81 (27%), Positives = 33/81 (40%) Frame = -3 Query: 367 QQPGACSWISPSKRKDPAPVTPNAALWRL*HGDRARVVERWWRCRRPAADPGASRIDASC 188 ++ WI ++ PAP+ P AL R + +R V+ R PG D Sbjct: 733 EKSSTIQWIGTPYQQPPAPM-PATALLRQLYANRESVIRATARQTPTGVGPGVFYGDQQT 791 Query: 187 GPTPGGANKASWKTPPGTRTA 125 GP P TPPG+ ++ Sbjct: 792 GPLP---------TPPGSESS 803
>ACSA_STRAW (Q82EL5) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 652 Score = 31.2 bits (69), Expect = 1.1 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Frame = -3 Query: 313 PVTPNAALWRL*H--GDRARVVERWWRCRRPAADPGASRIDASCGPT---PGGANK 161 P+ P A +W H GDR +V+ WW+ + GA I G T PG A + Sbjct: 390 PINPEAWIWYRKHIGGDRTPIVDTWWQ-----TETGAMMISPLPGVTETKPGSAQR 440
>BCHN_ACIRU (Q9WXB4) Light-independent protochlorophyllide reductase subunit N| (EC 1.18.-.-) (LI-POR subunit N) (DPOR subunit N) Length = 422 Score = 30.8 bits (68), Expect = 1.4 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = +3 Query: 168 APPGVGPHDASILLAPGSAAGRRQRHHRSTTRARSP 275 A P VGPH IL P AA R H R R +P Sbjct: 210 AMPAVGPHTKFILAQPFLAATARALHERGARRIAAP 245
>PTPA1_ASPOR (Q2UN27) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 478 Score = 30.8 bits (68), Expect = 1.4 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 19/61 (31%) Frame = -3 Query: 235 RRPAADPGASRIDASCGPT-------------PGGANKASWKT------PPGTRTAATQA 113 R P+A P SRI S GP PG KA W T PP T TAA A Sbjct: 358 RDPSAIPPPSRIHTSSGPETRPRQVPPSARQDPGPGTKAPWATASQSTPPPSTGTAAPWA 417 Query: 112 S 110 + Sbjct: 418 T 418
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +3 Query: 168 APPGVGPHDASILLAPGSAAGRRQRH-HRSTTRARSPCHRRHSAAFGVT 311 +P V H S + + R +RH HR TR+RS HRR S + T Sbjct: 38 SPSRVSKHSESHSRSRSKSRSRSRRHSHRRYTRSRSHSHRRRSRSRSYT 86
>NUKM_ARATH (Q42577) NADH-ubiquinone oxidoreductase 20 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20KD) (CI-20KD) Length = 218 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = +2 Query: 203 PTSSRVGGGPATAPPP--LDDARAVAVSQAPQCRVWRHRGGILPLAW 337 PTS G P+T+PPP L A +S+ W G I P+ + Sbjct: 43 PTSYTRPGPPSTSPPPPGLSKAAEFVISKVDDLMNWARTGSIWPMTF 89
>UPL1_ARATH (Q8GY23) E3 ubiquitin protein ligase UPL1 (EC 6.3.2.-)| (Ubiquitin-protein ligase 1) Length = 3684 Score = 30.4 bits (67), Expect = 1.9 Identities = 19/49 (38%), Positives = 24/49 (48%) Frame = +2 Query: 197 VDPTSSRVGGGPATAPPPLDDARAVAVSQAPQCRVWRHRGGILPLAWTD 343 VDP S+R+ GG APPPL D V + + R G+ WTD Sbjct: 2323 VDPFSARLAGG--GAPPPLTDYSVVGMDSS--------RRGVGDSRWTD 2361
>CDPK4_PLAYO (Q7RJG2) Calcium-dependent protein kinase 4 (EC 2.7.11.1)| Length = 527 Score = 30.4 bits (67), Expect = 1.9 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 11 RDWTGLMYTRAPDAMHRLHHQALPMVSCGIIAFACLCCC 127 +D G Y APD +H + + + SCG+I + L C Sbjct: 228 KDKIGTAYYIAPDVLHGTYDEKCDIWSCGVILYILLSGC 266
>CDPK4_PLAF7 (Q8IBS5) Calcium-dependent protein kinase 4 (EC 2.7.11.1)| Length = 527 Score = 30.4 bits (67), Expect = 1.9 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 11 RDWTGLMYTRAPDAMHRLHHQALPMVSCGIIAFACLCCC 127 +D G Y APD +H + + + SCG+I + L C Sbjct: 228 KDKIGTAYYIAPDVLHGTYDEKCDIWSCGVILYILLSGC 266
>CDPK4_PLABA (P62345) Calcium-dependent protein kinase 4 (EC 2.7.11.1) (PbCDPK4)| Length = 527 Score = 30.4 bits (67), Expect = 1.9 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 11 RDWTGLMYTRAPDAMHRLHHQALPMVSCGIIAFACLCCC 127 +D G Y APD +H + + + SCG+I + L C Sbjct: 228 KDKIGTAYYIAPDVLHGTYDEKCDIWSCGVILYILLSGC 266
>NMDE3_MOUSE (Q01098) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1239 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -3 Query: 271 DRA-RVVERWWRCRRPAADPGASRIDASCGPTPGGANKASWKTPPGTRT 128 DRA R +E W RR A + + GP PG + + W+ P G RT Sbjct: 914 DRATRTIENWGNNRRAPAPTTSGPRSCTPGP-PGQPSPSGWRPPGGGRT 961
>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1904 Score = 30.4 bits (67), Expect = 1.9 Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +3 Query: 138 PGGVFQLALFAPPGVGPHDASILLAPGS-AAGRRQRHHRSTTRARSPCHRRHSA 296 PGG AL PP VG + +S +PGS AAG QRHH + +P H+ +A Sbjct: 132 PGGPVAPAL--PPPVGINSSS---SPGSSAAGLHQRHH----QPGAPAHQHRAA 176
>CDPK1_PLAFK (P62343) Calcium-dependent protein kinase 1 (EC 2.7.11.1) (PfCPK)| (PfCDPK1) Length = 523 Score = 30.4 bits (67), Expect = 1.9 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 Query: 11 RDWTGLMYTRAPDAMHRLHHQALPMVSCGIIAFACLC 121 RD G Y AP+ + + +++ + SCG+I + LC Sbjct: 225 RDRLGTAYYIAPEVLRKKYNEKCDVWSCGVILYILLC 261
>CDPK1_PLAF7 (P62344) Calcium-dependent protein kinase 1 (EC 2.7.11.1)| Length = 523 Score = 30.4 bits (67), Expect = 1.9 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 Query: 11 RDWTGLMYTRAPDAMHRLHHQALPMVSCGIIAFACLC 121 RD G Y AP+ + + +++ + SCG+I + LC Sbjct: 225 RDRLGTAYYIAPEVLRKKYNEKCDVWSCGVILYILLC 261
>CDPK1_PLAYO (Q7RAH3) Calcium-dependent protein kinase 1 (EC 2.7.11.1)| Length = 534 Score = 30.0 bits (66), Expect = 2.4 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 Query: 11 RDWTGLMYTRAPDAMHRLHHQALPMVSCGIIAFACLC 121 RD G Y AP+ + + +++ + SCG+I + LC Sbjct: 224 RDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLC 260
>UBP19_HUMAN (O94966) Ubiquitin carboxyl-terminal hydrolase 19 (EC 3.1.2.15)| (Ubiquitin thioesterase 19) (Ubiquitin-specific-processing protease 19) (Deubiquitinating enzyme 19) (Zinc finger MYND domain-containing protein 9) (Fragment) Length = 1371 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -3 Query: 268 RARVVERWWRCRRPAADPGASRIDASCGPTPGGANKASWKTPPG 137 R R +RW PAA G +++ GPTP + TPPG Sbjct: 426 RKRQSQRWGGLEAPAARVGGAKVAVPTGPTPLDS------TPPG 463
>NMDE3_RAT (Q00961) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1237 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -3 Query: 271 DRA-RVVERWWRCRRPAADPGASRIDASCGPTPGGANKASWKTPPGTRT 128 DRA R +E W RR A + ++ GP PG + + W P G RT Sbjct: 914 DRATRTIENWGNNRRVPAPTASGPRSSTPGP-PGQPSPSGWGPPGGGRT 961
>APAH_BURPS (O69115) Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC| 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase) Length = 282 Score = 29.3 bits (64), Expect = 4.1 Identities = 20/60 (33%), Positives = 23/60 (38%) Frame = -3 Query: 304 PNAALWRL*HGDRARVVERWWRCRRPAADPGASRIDASCGPTPGGANKASWKTPPGTRTA 125 PN L H DR RV + R GA A+ GP A W PG +TA Sbjct: 163 PNCWSPDLKHADRLRVAFNAFTRIRFCTPEGAMEFRANGGPAAAPAGYLPWFDAPGRKTA 222
>APAH_BURMA (Q9AEV8) Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC| 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase) Length = 282 Score = 29.3 bits (64), Expect = 4.1 Identities = 20/60 (33%), Positives = 23/60 (38%) Frame = -3 Query: 304 PNAALWRL*HGDRARVVERWWRCRRPAADPGASRIDASCGPTPGGANKASWKTPPGTRTA 125 PN L H DR RV + R GA A+ GP A W PG +TA Sbjct: 163 PNCWSPDLKHADRLRVAFNAFTRIRFCTPEGAMEFRANGGPAAAPAGYLPWFDAPGRKTA 222
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = +2 Query: 128 GTCSWWRLPASFVCSTRGRTT*CVDPTSSRVGG 226 G+CS + P F C +G CV SS GG Sbjct: 183 GSCSNTQCPNGFYCQVQGNNAVCVPQQSSTSGG 215
>GLAS_DROVI (Q24732) Protein glass| Length = 598 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/56 (32%), Positives = 22/56 (39%) Frame = +2 Query: 80 PMVSCGIIAFACLCCCGTCSWWRLPASFVCSTRGRTT*CVDPTSSRVGGGPATAPP 247 P C CL C G + LP S + S+ C DPT +G T PP Sbjct: 58 PQQECAASCVGCLSCQGNTA---LPISSLTSSDFDCGGCFDPTIGVLGSQINTTPP 110
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 28.9 bits (63), Expect = 5.4 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Frame = -3 Query: 232 RPAADPGASRIDASCGPTPGGANKASWKTP-----PGTRTAATQASKSNN 98 RP + PG ++ GP PGGA + + P P A SKS+N Sbjct: 201 RPGSRPGGAK---KAGPKPGGAKQGGGRRPSPAMMPSHPNPAQMPSKSDN 247
>ACSA_SYNEL (Q8DKH2) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 656 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -3 Query: 313 PVTPNAALW--RL*HGDRARVVERWWRCRRPAADPGASRIDASCGPTPGGANKASWKTP 143 P+ P A +W R+ G+R +V+ WW+ + G I + G P AS P Sbjct: 396 PINPEAWMWYYRVIGGERCPIVDTWWQ-----TETGGHMITSLPGALPMKPGSASKPFP 449
>TNPO1_MOUSE (Q8BFY9) Transportin-1 (Importin beta-2) (Karyopherin beta-2)| Length = 890 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -1 Query: 213 ELVGSTHHVVRPRVEQTKLAGRRHQEH-VPQQHKQAKAIIPHDTIGNAW*CRRCIASGAR 37 E + + +RPR +++ ++H+E + ++ I DTI + W R+C A+ Sbjct: 326 ETIPDSEQDIRPRFHRSRTVAQQHEEDGIEEEDDDDDEIDDDDTISD-WNLRKCSAAALD 384 Query: 36 VYIN 25 V N Sbjct: 385 VLAN 388
>QA1F_NEUCR (P11638) Quinic acid utilization activator| Length = 816 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +3 Query: 156 LALFAPPGVGPHDASILLAPGSAAGRRQRHHRSTTRARSPCH 281 L+ + PP ++AS+ LAPG A R + +T P H Sbjct: 717 LSTYPPPATHLNEASVALAPGGAPPRPPPPYVDSTTNHPPYH 758
>CRK_DAUCA (P53681) CDPK-related protein kinase (EC 2.7.11.1) (PK421)| Length = 602 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +2 Query: 14 DWTGLMYTRAPDAMHRLHHQALPMVSCGIIAFACLCCCGTCSWW 145 D G Y AP+ +HR + + S G+I++ L CG+ +W Sbjct: 312 DIVGSAYYVAPEVLHRSYSTEADVWSIGVISYILL--CGSRPFW 353
>ACSA_HELPY (O25686) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 662 Score = 28.5 bits (62), Expect = 7.1 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 12/71 (16%) Frame = -3 Query: 313 PVTPNAALW--RL*HGDRARVVERWWRCRRP----AADPGASRIDASCG--PTPG----G 170 P+ P A W + +V+ WW+ + PGA+ I ASC P PG Sbjct: 395 PINPTAWKWFYEKIGNSKCSIVDTWWQTETGGHIISPLPGATPIRASCATLPLPGIHAEV 454 Query: 169 ANKASWKTPPG 137 N+ KT PG Sbjct: 455 LNEDGTKTKPG 465
>GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated oncogene)| (Oncogene GLI) Length = 1106 Score = 28.5 bits (62), Expect = 7.1 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +2 Query: 194 CVDPTSSRVGGGPATAPPP 250 C P R+GGGPA PPP Sbjct: 1011 CGHPEVGRLGGGPALYPPP 1029
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -3 Query: 232 RPAADPGASRIDASCGPTPGGANKASWKTPP 140 RP A PG A GP PGG + PP Sbjct: 222 RPGATPGPRPAAAQGGPRPGGPRPSPGSMPP 252
>GLND_AZOSE (Q5NZH8) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 862 Score = 28.1 bits (61), Expect = 9.2 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -3 Query: 82 RQRLVMQTMHRIWRAC 35 R LV +T+HR+WRAC Sbjct: 47 RAHLVDETIHRLWRAC 62
>YPHB_ECOLI (P76584) Hypothetical protein yphB| Length = 290 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Frame = -3 Query: 271 DRARVVERWWRCRRPAADPGAS---RIDASCGPTPGGANKAS 155 D+ V+E +WR P PG DASC P AN+ S Sbjct: 17 DQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVS 58
>PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein| Rigui) (mPER) (M-Rigui) Length = 1291 Score = 28.1 bits (61), Expect = 9.2 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Frame = +3 Query: 168 APPGVGPHDASILLAPG------SAAGRRQRHHRSTTRARSPCHRRHSAAFGVTG 314 AP G H I PG S A R + HH T R +PC+ H + +G Sbjct: 813 APSAPGCHHGPI--PPGRRHHCRSKAKRSRHHHHQTPRPETPCYVSHPSPVPSSG 865
>FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related protein FKHL6)| (Forkhead-related transcription factor 2) (FREAC-2) (Forkhead-related activator 2) Length = 444 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/42 (28%), Positives = 19/42 (45%) Frame = -3 Query: 217 PGASRIDASCGPTPGGANKASWKTPPGTRTAATQASKSNNSA 92 P + + +C P PG A PP AA A ++ +S+ Sbjct: 7 PPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSS 48
>HA34_BRELC (Q99074) HAM34 protein| Length = 173 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%) Frame = -3 Query: 229 PAADPGASRID--ASCGPTPGGANKASWKTPP--GTRTA 125 PAAD G + + + GP GA + TPP GT+TA Sbjct: 48 PAADAGTASTEQTTTAGPEAAGATNGTTTTPPADGTQTA 86
>TOP3A_HUMAN (Q13472) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase| III alpha) Length = 1001 Score = 28.1 bits (61), Expect = 9.2 Identities = 24/77 (31%), Positives = 30/77 (38%) Frame = -3 Query: 367 QQPGACSWISPSKRKDPAPVTPNAALWRL*HGDRARVVERWWRCRRPAADPGASRIDASC 188 QQ G W+ ++ AP T A W GDR R +E R +RP A + Sbjct: 928 QQCGFFQWVD----ENTAPGTSGAPSWT---GDRGRTLESEARSKRPRAS------SSDM 974 Query: 187 GPTPGGANKASWKTPPG 137 G T K S PG Sbjct: 975 GSTAKKPRKCSLCHQPG 991
>ACSA_DEIRA (Q9RRL7) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 649 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = -3 Query: 313 PVTPNAALW--RL*HGDRARVVERWWR 239 P+ P A +W R+ G+R VV+ WW+ Sbjct: 395 PINPEAWMWYYRVIGGERCPVVDTWWQ 421
>CSPG5_HUMAN (O95196) Chondroitin sulfate proteoglycan 5 precursor (Neuroglycan| C) (Acidic leucine-rich EGF-like domain-containing brain protein) Length = 566 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -3 Query: 229 PAADPGASRIDASCGPTPGGANKASWKTPPG 137 PA +P A+ GP G ++ASW P G Sbjct: 50 PAWEPPANDTREEAGPPAAGEDEASWTAPGG 80
>PP220_ASFB7 (Q08358) Polyprotein pp220 (220 kDa polyprotein) [Contains: p34;| p14; p37; p150] Length = 2474 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -3 Query: 241 RCRRPAADPGASRIDASCGPTPGGANKASWK 149 R PA D + GP PGGA +A WK Sbjct: 597 RINSPAVDLARGHV----GPNPGGAQEADWK 623
>PACC_SCLSC (Q9P413) pH-response transcription factor pacC/RIM101| Length = 625 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Frame = +3 Query: 132 RVPGG--VFQLALFAPPGVGPHDASILLAPGSAAGRRQRHHRSTTRARSPCHRRHSAAFG 305 R PGG + L A +G +D + + PGSA HH + +P H + S+ G Sbjct: 154 RQPGGKVIANLQHLAANPMGYYDHNASMHPGSAGVYGNSHHGGHSGYYAPAHSQQSSYGG 213 Query: 306 VTG 314 G Sbjct: 214 GPG 216 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,901,768 Number of Sequences: 219361 Number of extensions: 1253089 Number of successful extensions: 4750 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4723 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
