>gb|AC151665.26| Medicago truncatula clone mth2-7k4, complete sequence
          Length = 135880

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 377   aaatttggtagtaacaacagacaac 401
             |||||||||||||||||||||||||
Sbjct: 47564 aaatttggtagtaacaacagacaac 47540

>gb|AC174354.6| Medicago truncatula clone mth2-8m12, complete sequence
          Length = 122859

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 377   aaatttggtagtaacaacagacaac 401
             |||||||||||||||||||||||||
Sbjct: 38895 aaatttggtagtaacaacagacaac 38871

>gb|AC165239.3| Mus musculus chromosome 19, clone RP24-73C2, complete sequence
          Length = 208461

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   aacccaacccaatccaactcaa 133
             ||||||||||||||||||||||
Sbjct: 90686 aacccaacccaatccaactcaa 90665



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   aacccaacccaatccaactcaa 133
             ||||||||||||||||||||||
Sbjct: 90666 aacccaacccaatccaactcaa 90645



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   aacccaacccaatccaactcaa 133
             ||||||||||||||||||||||
Sbjct: 90616 aacccaacccaatccaactcaa 90595



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   aacccaacccaatccaactcaa 133
             ||||||||||||||||||||||
Sbjct: 90556 aacccaacccaatccaactcaa 90535



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   caaacccaacccaatccaac 129
             ||||||||||||||||||||
Sbjct: 90708 caaacccaacccaatccaac 90689

>gb|AC152161.4| Mus musculus chromosome 19, clone RP23-162O21, complete sequence
          Length = 194652

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   aacccaacccaatccaactcaa 133
             ||||||||||||||||||||||
Sbjct: 10467 aacccaacccaatccaactcaa 10446



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   aacccaacccaatccaactcaa 133
             ||||||||||||||||||||||
Sbjct: 10447 aacccaacccaatccaactcaa 10426



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   aacccaacccaatccaactcaa 133
             ||||||||||||||||||||||
Sbjct: 10397 aacccaacccaatccaactcaa 10376



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   aacccaacccaatccaactcaa 133
             ||||||||||||||||||||||
Sbjct: 10337 aacccaacccaatccaactcaa 10316



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   caaacccaacccaatccaac 129
             ||||||||||||||||||||
Sbjct: 10489 caaacccaacccaatccaac 10470

>gb|AC109503.13| Mus musculus chromosome 12, clone RP23-427N7, complete sequence
          Length = 187739

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 108    accaaacccaacccaatccaac 129
              ||||||||||||||||||||||
Sbjct: 122315 accaaacccaacccaatccaac 122294

>gb|AC125046.3| Mus musculus BAC clone RP23-349O22 from 6, complete sequence
          Length = 223938

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 108    accaaacccaacccaatccaactcaa 133
              |||||||||||||||| |||||||||
Sbjct: 148080 accaaacccaacccaacccaactcaa 148105

>gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 243051

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   ccaaacccaacccaatccaac 129
             |||||||||||||||||||||
Sbjct: 26808 ccaaacccaacccaatccaac 26788

>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence
          Length = 253343

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    ccaaacccaacccaatccaac 129
              |||||||||||||||||||||
Sbjct: 209192 ccaaacccaacccaatccaac 209212

>emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chromosome 11 Contains the
             Pank3 gene for pantothenate kinase 3, a pseudogene similar
             to part of ribosomal protein L7a (Rpl7a), a pseudogene
             similar to part of fibrillarin (Fbl), the Rars gene for
             arginyl-tRNA synthetase, the 3' end of the gene for a
             novel protein similar to human KIBRA and two CpG islands,
             complete sequence
          Length = 181103

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   ccaaacccaacccaatccaac 129
             |||||||||||||||||||||
Sbjct: 66743 ccaaacccaacccaatccaac 66763

>emb|CT025664.5| Mouse DNA sequence from clone RP24-174I18 on chromosome 9, complete
              sequence
          Length = 163813

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    ccaaacccaacccaatccaac 129
              |||||||||||||||||||||
Sbjct: 105176 ccaaacccaacccaatccaac 105196

>emb|AL772345.5| Mouse DNA sequence from clone RP23-311I21 on chromosome 1, complete
             sequence
          Length = 198092

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 199   cttgacagggcttgaagaatt 219
             |||||||||||||||||||||
Sbjct: 37554 cttgacagggcttgaagaatt 37574

>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete
             sequence
          Length = 217187

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 420   agaaacaattacatccaaaagtca 443
             |||||||| |||||||||||||||
Sbjct: 56276 agaaacaaatacatccaaaagtca 56299

>gb|AC131745.4| Mus musculus BAC clone RP23-55L3 from chromosome 14, complete sequence
          Length = 240647

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   tccaatcttggtggacaggg 169
             ||||||||||||||||||||
Sbjct: 66287 tccaatcttggtggacaggg 66306

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 112      aacccaacccaatccaactc 131
                ||||||||||||||||||||
Sbjct: 11545329 aacccaacccaatccaactc 11545310

>gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complete sequence
          Length = 113258

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 391   caacagacaactacatccaaaagtcagggagaaaca 426
             ||||||||||||||||| ||||  || |||||||||
Sbjct: 46708 caacagacaactacatcaaaaacccaaggagaaaca 46673

>gb|AC113490.10| Mus musculus chromosome 1, clone RP23-358M7, complete sequence
          Length = 226924

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 112   aacccaacccaatccaactcaaga 135
             |||||||||||| |||||||||||
Sbjct: 12516 aacccaacccaacccaactcaaga 12493

>emb|AL121915.8|HSJ1193N1 Human DNA sequence from clone RP5-1193N1 on chromosome 20 Contains the
             LAMR1P1 gene for laminin receptor 1 pseudogene 1, complete
             sequence
          Length = 51859

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   ccccaaagctagctagctat 360
             ||||||||||||||||||||
Sbjct: 24470 ccccaaagctagctagctat 24451

>gb|AC107403.6| Drosophila melanogaster X BAC RP98-21M21 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181831

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   accaaacccaacccaatcca 127
             ||||||||||||||||||||
Sbjct: 49714 accaaacccaacccaatcca 49733

>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   aacccaacccaatccaactc 131
             ||||||||||||||||||||
Sbjct: 95901 aacccaacccaatccaactc 95882

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 112      aacccaacccaatccaactc 131
                ||||||||||||||||||||
Sbjct: 11542092 aacccaacccaatccaactc 11542073

>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 391    caacagacaactacatccaaaagtcagggagaaaca 426
              ||||||||||||||||| ||||  || |||||||||
Sbjct: 134942 caacagacaactacatcaaaaacccaaggagaaaca 134907

>gb|AC115959.17| Mus musculus chromosome 1, clone RP24-65D16, complete sequence
          Length = 187431

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 112    aacccaacccaatccaactcaaga 135
              |||||||||||| |||||||||||
Sbjct: 148587 aacccaacccaacccaactcaaga 148564

>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete
              sequence
          Length = 326403

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    accaaacccaacccaatcca 127
              ||||||||||||||||||||
Sbjct: 210268 accaaacccaacccaatcca 210287

>gb|AC131658.3| Mus musculus BAC clone RP23-239F24 from 3, complete sequence
          Length = 200955

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    gctagctagctatgtgcatg 367
              ||||||||||||||||||||
Sbjct: 110959 gctagctagctatgtgcatg 110940

>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete
             sequence
          Length = 175784

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   aaacaattacatccaaaagt 441
             ||||||||||||||||||||
Sbjct: 73717 aaacaattacatccaaaagt 73736


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,707,411
Number of Sequences: 3902068
Number of extensions: 3707411
Number of successful extensions: 70450
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70312
Number of HSP's gapped (non-prelim): 138
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)