Clone Name | rbastl03f04 |
---|---|
Clone Library Name | barley_pub |
>CP242_PIG (P79402) Cytochrome P450 2C42 (EC 1.14.14.1) (CYPIIC42) (Fragment)| Length = 327 Score = 31.6 bits (70), Expect = 0.80 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = -1 Query: 117 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVDISFPF 1 +GTT+L S TSV Y K P+P +F HF+D S F Sbjct: 220 KGTTILTSL--TSVLYDCKAFPNPEVFDPGHFLDESGNF 256
>CR1EA_BACTX (Q57458) Pesticidal crystal protein cry1Ea (Insecticidal| delta-endotoxin CryIE(a)) (Crystaline entomocidal protoxin) (133 kDa crystal protein) Length = 1171 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +2 Query: 32 TTNRTGLGSNLTEYETDV*THDS----NTVVPSVLTRIPSCKG 148 T R+ +N+T T V TH S NT+ P ++T+IP KG Sbjct: 430 TLTRSLYNTNITSLPTFVWTHHSATNTNTINPDIITQIPLVKG 472
>CP2CJ_HUMAN (P33261) Cytochrome P450 2C19 (EC 1.14.13.80) ((R)-limonene| 6-monooxygenase) (EC 1.14.13.48) ((S)-limonene 6-monooxygenase) (EC 1.14.13.49) ((S)-limonene 7-monooxygenase) (CYPIIC19) (P450-11A) (Mephenytoin 4-hydroxylase) (CYPIIC17) (P450-254C Length = 490 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = -1 Query: 117 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVD 16 +GTT+L S TSV + K P+P +F +HF+D Sbjct: 383 KGTTILTSL--TSVLHDNKEFPNPEMFDPRHFLD 414
>SYA_LEGPA (Q5X4B7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 860 Score = 28.9 bits (63), Expect = 5.2 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = -1 Query: 231 AVVEVVKNTDSGGKPCIVLLEHLFA*ESPLQEGILVSTEGT-TVLESCV*TSVSYSVKL- 58 A+ ++ +N D V+ +H+ + + +G+L S EG VL + +V + KL Sbjct: 255 AIAQLGQNIDLNHTSLKVIADHIRSCSFLIVDGVLPSNEGRGYVLRRIIRRAVRHGNKLG 314 Query: 57 LPSPVLF-VVKHFVDI 13 LPSP F +V+ +D+ Sbjct: 315 LPSPFFFKLVQPLIDV 330
>CP239_MOUSE (P56656) Cytochrome P450 2C39 (EC 1.14.14.1) (CYPIIC39)| Length = 490 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = -1 Query: 117 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVDISFPF 1 +GTTV+ S TSV + K P+P LF HF+D + F Sbjct: 383 KGTTVVTSL--TSVLHDSKEFPNPELFDPGHFLDANGNF 419
>PHSG_YEAST (P06738) Glycogen phosphorylase (EC 2.4.1.1)| Length = 901 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/63 (23%), Positives = 26/63 (41%) Frame = +2 Query: 212 FTTSTTAKEVSSDWPSLMQL*LHILVNITHY*FGHFPLRRLDILSNLGWCFRYMIARNRT 391 +T T +E WP + FGH R L+I+ ++ W F +A+ Sbjct: 424 YTNHTVMQEALEKWPRRL--------------FGHLLPRHLEIIYDINWFFLQDVAKKFP 469 Query: 392 RDL 400 +D+ Sbjct: 470 KDV 472
>CP2CI_HUMAN (P33260) Cytochrome P450 2C18 (EC 1.14.14.1) (CYPIIC18)| (P450-6B/29C) Length = 490 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = -1 Query: 117 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVDISFPF 1 +GTT++ S TSV ++ K P+P +F HF+D S F Sbjct: 383 KGTTIITSL--TSVLHNDKEFPNPEMFDPGHFLDKSGNF 419 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,328,609 Number of Sequences: 219361 Number of extensions: 942978 Number of successful extensions: 2326 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2304 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2325 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)