>gb|AY029259.1| Hordeum vulgare alpha-L-arabinofuranosidase/beta-D-xylosidase
            isoenzyme ARA-I mRNA, complete cds
          Length = 2647

 Score =  640 bits (323), Expect = 0.0
 Identities = 335/339 (98%)
 Strand = Plus / Minus

                                                                        
Query: 106  tttacagttgcaaatcgtccctccaattccaaacgaataaaatcaaatttaacaaccgca 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2634 tttacagttgcaaatcgtccctccaattccaaacgaataaaatcaaatttaacaaccgca 2575

                                                                        
Query: 166  acaaaacaactcccaaagcctcccgtggatccaattctttcttgtcccaacgaaaggccc 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2574 acaaaacaactcccaaagcctcccgtggatccaattctttcttgtcccaacgaaaggccc 2515

                                                                        
Query: 226  atttggttatttcacctcccttaaatcaattcctacggcccattaccccggtcggcccat 285
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2514 atttggttatttcacctcccttaaatcgattcctacggcccattaccccggtcggcccat 2455

                                                                        
Query: 286  ccaattccatcttctttttcccctatcaaatgaaatcgatcctccctacgtggaattttt 345
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2454 ccaattccatcttctttttcccctatcaaatgaaatcgattctccctacgtggaattttt 2395

                                                                        
Query: 346  ctgatcaccgtcgatcatcagactcgcagttccacggtgtgcttgaggtcgccgacgtgc 405
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 2394 ctgatcaccgtcgatcatcagactcgcagttccacggtgtgcttgaggtcgccgtcatgc 2335

                                                   
Query: 406  agcgtgtggccgccgagcgccaccttgcggccgcccagc 444
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 2334 agcgtgtggccgccgagcgccaccttgcggccgcccagc 2296

>ref|XM_474061.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2298

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                              
Query: 382  gtgtgcttgaggtcgccgacgtgcagcgtgtggccgccgagcgccacctt 431
            |||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 2279 gtgtgcttgaggtcgccgacgtgcagcgtgtggctgcccagcgccacctt 2230

>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
              complete sequence
          Length = 153643

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                                
Query: 382    gtgtgcttgaggtcgccgacgtgcagcgtgtggccgccgagcgccacctt 431
              |||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 142131 gtgtgcttgaggtcgccgacgtgcagcgtgtggctgcccagcgccacctt 142180



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 107    ttacagttgcaaatcgtccctccaa 131
              |||||||||||||||| ||||||||
Sbjct: 141858 ttacagttgcaaatcgaccctccaa 141882

>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
             complete sequence
          Length = 126659

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                               
Query: 382   gtgtgcttgaggtcgccgacgtgcagcgtgtggccgccgagcgccacctt 431
             |||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 18418 gtgtgcttgaggtcgccgacgtgcagcgtgtggctgcccagcgccacctt 18467



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 107   ttacagttgcaaatcgtccctccaa 131
             |||||||||||||||| ||||||||
Sbjct: 18145 ttacagttgcaaatcgaccctccaa 18169

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                                  
Query: 382      gtgtgcttgaggtcgccgacgtgcagcgtgtggccgccgagcgccacctt 431
                |||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 32623397 gtgtgcttgaggtcgccgacgtgcagcgtgtggctgcccagcgccacctt 32623446



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 107      ttacagttgcaaatcgtccctccaa 131
                |||||||||||||||| ||||||||
Sbjct: 32623124 ttacagttgcaaatcgaccctccaa 32623148

>dbj|AK101782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065A06, full
            insert sequence
          Length = 2821

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                              
Query: 382  gtgtgcttgaggtcgccgacgtgcagcgtgtggccgccgagcgccacctt 431
            |||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 2448 gtgtgcttgaggtcgccgacgtgcagcgtgtggctgcccagcgccacctt 2399



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 107  ttacagttgcaaatcgtccctccaa 131
            |||||||||||||||| ||||||||
Sbjct: 2721 ttacagttgcaaatcgaccctccaa 2697

>dbj|AK071973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088J07, full
            insert sequence
          Length = 1746

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                              
Query: 382  gtgtgcttgaggtcgccgacgtgcagcgtgtggccgccgagcgccacctt 431
            |||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 1409 gtgtgcttgaggtcgccgacgtgcagcgtgtggctgcccagcgccacctt 1360



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 107  ttacagttgcaaatcgtccctccaa 131
            |||||||||||||||| ||||||||
Sbjct: 1682 ttacagttgcaaatcgaccctccaa 1658

>gb|AY112378.1| Zea mays CL47610_1 mRNA sequence
          Length = 676

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 382 gtgtgcttgaggtcgccgacgtgcagcgtgtggccgccgagcgccacctt 431
           |||||||||||||| ||||||||||||||||||| ||| |||||||||||
Sbjct: 391 gtgtgcttgaggtccccgacgtgcagcgtgtggctgcccagcgccacctt 440



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 cccgtggatccaattctttc 206
           ||||||||||||||||||||
Sbjct: 216 cccgtggatccaattctttc 235

>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the 3'
              end of a novel gene (4933412J03Rik), a
              glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene,
              the Tnfsf15 gene for tumor necrosis factor (ligand)
              superfamily member 15 and the 3' end of the Tnfsf8 for
              tumor necrosis factor (ligand) superfamily member 8,
              complete sequence
          Length = 212420

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 296    cttctttttcccctatcaaatg 317
              ||||||||||||||||||||||
Sbjct: 201544 cttctttttcccctatcaaatg 201565

>gb|AC112494.2| Homo sapiens X BAC RP11-1L9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 155681

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 282    ccatccaattccatcttcttt 302
              |||||||||||||||||||||
Sbjct: 119520 ccatccaattccatcttcttt 119500

>emb|AL353730.13| Human DNA sequence from clone RP11-55P9 on chromosome 9, complete
             sequence
          Length = 147810

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   aataaaatcaaatttaacaac 161
             |||||||||||||||||||||
Sbjct: 56521 aataaaatcaaatttaacaac 56541

>gb|AC108734.10| Homo sapiens 3 BAC RP11-259P15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125990

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 147    atcaaatttaacaaccgcaacaaaa 171
              ||||||||||||||| |||||||||
Sbjct: 102960 atcaaatttaacaacagcaacaaaa 102984

>emb|BX247870.5| Zebrafish DNA sequence from clone RP71-24B12 in linkage group 14,
             complete sequence
          Length = 148854

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   aaacaactcccaaagcctccc 189
             |||||||||||||||||||||
Sbjct: 80405 aaacaactcccaaagcctccc 80385

>gb|U33007.1|SCD9461 Saccharomyces cerevisiae chromosome IV lambda 3641 and cosmids 9461,
             9831, and 9410
          Length = 78500

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   ccatcttctttttcccctatc 312
             |||||||||||||||||||||
Sbjct: 42258 ccatcttctttttcccctatc 42278

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     gagcgccaccttgcggccgc 439
               ||||||||||||||||||||
Sbjct: 2452084 gagcgccaccttgcggccgc 2452103

>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 290     ttccatcttctttttcccctatca 313
               ||||||||| ||||||||||||||
Sbjct: 1304518 ttccatcttttttttcccctatca 1304495

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 392     ggtcgccgacgtgcagcgtg 411
               ||||||||||||||||||||
Sbjct: 3418248 ggtcgccgacgtgcagcgtg 3418229

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    ggtcgccgacgtgcagcgtg 411
              ||||||||||||||||||||
Sbjct: 455930 ggtcgccgacgtgcagcgtg 455911

>gb|AC146004.3| Pan troglodytes BAC clone RP43-161E12 from 7, complete sequence
          Length = 129417

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   aaaacaactcccaaagcctc 187
             ||||||||||||||||||||
Sbjct: 50042 aaaacaactcccaaagcctc 50061

>gb|AC005030.1| Homo sapiens BAC clone GS1-589P19 from 7, complete sequence
          Length = 148915

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   aaaacaactcccaaagcctc 187
             ||||||||||||||||||||
Sbjct: 67838 aaaacaactcccaaagcctc 67857

>emb|BX908387.8| Zebrafish DNA sequence from clone DKEY-45B6 in linkage group 3, complete
              sequence
          Length = 212624

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      aagttgacattttccttata 25
              ||||||||||||||||||||
Sbjct: 141740 aagttgacattttccttata 141721

>ref|XM_570495.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CND04750) partial mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 ttccatcttctttttcccctatca 313
           ||||||||| ||||||||||||||
Sbjct: 102 ttccatcttttttttcccctatca 125

>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  agcgccaccttgcggccgcc 440
            ||||||||||||||||||||
Sbjct: 2214 agcgccaccttgcggccgcc 2195

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    ggtcgccgacgtgcagcgtg 411
              ||||||||||||||||||||
Sbjct: 265786 ggtcgccgacgtgcagcgtg 265767

>gb|AE012383.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 291
            of 460 of the complete genome
          Length = 10211

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  ttccacggtgtgcttgaggtcgcc 398
            ||||||||||||| ||||||||||
Sbjct: 1186 ttccacggtgtgcgtgaggtcgcc 1163

>emb|BX255915.13| Zebrafish DNA sequence from clone CH211-245L1 in linkage group 5,
            complete sequence
          Length = 157382

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  caaacgaataaaatcaaatt 154
            ||||||||||||||||||||
Sbjct: 3795 caaacgaataaaatcaaatt 3814

>emb|BX569789.4| Zebrafish DNA sequence from clone DKEY-68O6 in linkage group 3,
             complete sequence
          Length = 244662

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aagttgacattttccttata 25
             ||||||||||||||||||||
Sbjct: 44041 aagttgacattttccttata 44060

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 421     agcgccaccttgcggccgcc 440
               ||||||||||||||||||||
Sbjct: 4119100 agcgccaccttgcggccgcc 4119081

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 375     ttccacggtgtgcttgaggtcgcc 398
               ||||||||||||| ||||||||||
Sbjct: 1704419 ttccacggtgtgcgtgaggtcgcc 1704442

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     aataaaatcaaatttaacaa 160
               ||||||||||||||||||||
Sbjct: 2271224 aataaaatcaaatttaacaa 2271243

>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0535G04
          Length = 154180

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    aataaaatcaaatttaacaa 160
              ||||||||||||||||||||
Sbjct: 130681 aataaaatcaaatttaacaa 130700

>emb|AL954168.6| Zebrafish DNA sequence from clone DKEY-3I24 in linkage group 17,
             complete sequence
          Length = 205011

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 127   tccaattccaaacgaataaaatcaaatt 154
             ||||||||||||| ||||||||||||||
Sbjct: 40013 tccaattccaaac-aataaaatcaaatt 39987

>gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, complete sequence
          Length = 217058

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      gaatcaagttgacattttcc 20
              ||||||||||||||||||||
Sbjct: 109454 gaatcaagttgacattttcc 109435


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,467,354
Number of Sequences: 3902068
Number of extensions: 4467354
Number of successful extensions: 86909
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 86596
Number of HSP's gapped (non-prelim): 315
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)