>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  165 bits (83), Expect = 2e-37
 Identities = 107/115 (93%)
 Strand = Plus / Minus

                                                                            
Query: 328      cccctctgtcttccacactacagaaggacccctcttctcaagttcacaagggcggagctt 387
                |||||||||| |||| |||||||| ||||||||||||| ||||||||| || ||||||||
Sbjct: 28343993 cccctctgtcctccagactacagagggacccctcttctgaagttcacatggccggagctt 28343934

                                                                       
Query: 388      gttcattacacgccccatcatagccatcgctgcgatgcttggaaactgaccttca 442
                ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 28343933 gttcattacacgccccatcatcgccattgctgcgatgcttggaaactgaccttca 28343879

>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0519D04
          Length = 193068

 Score =  165 bits (83), Expect = 2e-37
 Identities = 107/115 (93%)
 Strand = Plus / Minus

                                                                         
Query: 328   cccctctgtcttccacactacagaaggacccctcttctcaagttcacaagggcggagctt 387
             |||||||||| |||| |||||||| ||||||||||||| ||||||||| || ||||||||
Sbjct: 59093 cccctctgtcctccagactacagagggacccctcttctgaagttcacatggccggagctt 59034

                                                                    
Query: 388   gttcattacacgccccatcatagccatcgctgcgatgcttggaaactgaccttca 442
             ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 59033 gttcattacacgccccatcatcgccattgctgcgatgcttggaaactgaccttca 58979

>dbj|AK122113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127O15, full
            insert sequence
          Length = 3158

 Score =  165 bits (83), Expect = 2e-37
 Identities = 107/115 (93%)
 Strand = Plus / Minus

                                                                        
Query: 328  cccctctgtcttccacactacagaaggacccctcttctcaagttcacaagggcggagctt 387
            |||||||||| |||| |||||||| ||||||||||||| ||||||||| || ||||||||
Sbjct: 3009 cccctctgtcctccagactacagagggacccctcttctgaagttcacatggccggagctt 2950

                                                                   
Query: 388  gttcattacacgccccatcatagccatcgctgcgatgcttggaaactgaccttca 442
            ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 2949 gttcattacacgccccatcatcgccattgctgcgatgcttggaaactgaccttca 2895

>dbj|AK064954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A04, full
            insert sequence
          Length = 2892

 Score =  157 bits (79), Expect = 4e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                        
Query: 328  cccctctgtcttccacactacagaaggacccctcttctcaagttcacaagggcggagctt 387
            |||||||||| |||| |||||||| ||||||||||||| ||||||||| || ||||||||
Sbjct: 2777 cccctctgtcctccagactacagagggacccctcttctgaagttcacatggccggagctt 2718

                                                               
Query: 388  gttcattacacgccccatcatagccatcgctgcgatgcttggaaactgacc 438
            ||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2717 gttcattacacgccccatcatcgccattgctgcgatgcttggaaactgacc 2667

>emb|CT009689.5| Pig DNA sequence from clone CH242-266P8 on chromosome 17, complete
             sequence
          Length = 38080

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 179   cactacgtaccatctttttctct 201
             |||||||||||||||||||||||
Sbjct: 23691 cactacgtaccatctttttctct 23669

>ref|XM_475864.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2094

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 401  cccatcatagccatcgctgcgatgcttggaaactgaccttca 442
            |||||||| ||||||||   ||||||||| ||||||||||||
Sbjct: 2024 cccatcatcgccatcgccttgatgcttgggaactgaccttca 1983

>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23,
              complete sequence
          Length = 191765

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 401    cccatcatagccatcgctgcgatgcttggaaactgaccttca 442
              |||||||| ||||||||   ||||||||| ||||||||||||
Sbjct: 104389 cccatcatcgccatcgccttgatgcttgggaactgaccttca 104430

>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
              complete sequence
          Length = 177861

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 401    cccatcatagccatcgctgcgatgcttggaaactgaccttca 442
              |||||||| ||||||||   ||||||||| ||||||||||||
Sbjct: 160817 cccatcatcgccatcgccttgatgcttgggaactgaccttca 160858

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 401      cccatcatagccatcgctgcgatgcttggaaactgaccttca 442
                |||||||| ||||||||   ||||||||| ||||||||||||
Sbjct: 27229421 cccatcatcgccatcgccttgatgcttgggaactgaccttca 27229462

>dbj|AK101673.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058D22, full
            insert sequence
          Length = 2911

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 401  cccatcatagccatcgctgcgatgcttggaaactgaccttca 442
            |||||||| ||||||||   ||||||||| ||||||||||||
Sbjct: 2633 cccatcatcgccatcgccttgatgcttgggaactgaccttca 2592

>emb|AL354951.7| Human DNA sequence from clone RP11-451M19 on chromosome 10 Contains a
              ribosomal protein L21 (RPL21) pseudogene, the XPNPEP1 gene
              for X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
              (SAMP, XPNPEP, XPNPEPL), a novel gene and one CpG island,
              complete sequence
          Length = 205329

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    tttcacaatcaacacatgaat 121
              |||||||||||||||||||||
Sbjct: 147139 tttcacaatcaacacatgaat 147119

>gb|AC169503.1| Mus musculus BAC clone RP24-281B5 from chromosome 12, complete sequence
          Length = 163008

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     caaatgcaatatccacagtt 27
             ||||||||||||||||||||
Sbjct: 62840 caaatgcaatatccacagtt 62821

>emb|AL591421.8| Human DNA sequence from clone RP11-394N20 on chromosome X, complete
             sequence
          Length = 50321

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    atgcaatatccacagttatg 30
             ||||||||||||||||||||
Sbjct: 43072 atgcaatatccacagttatg 43091

>emb|AL161442.22| Human DNA sequence from clone RP6-102F8 on chromosome Xq25-26.3
             Contains the 5' end of variants of the MBNL3 gene for
             muscleblind-like 3 (Drosophila) and a CpG island, complete
             sequence
          Length = 112453

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   tctttttctcttcctctgca 210
             ||||||||||||||||||||
Sbjct: 54091 tctttttctcttcctctgca 54110

>emb|AL645611.9| Mouse DNA sequence from clone RP23-432O24 on chromosome 11 Contains
             part of the Adamts2 gene for a disintegrin-like and
             metalloprotease (reprolysin type) with thrombospondin type
             1 motif 2, complete sequence
          Length = 69492

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   tacgtaccatctttttctct 201
             ||||||||||||||||||||
Sbjct: 62029 tacgtaccatctttttctct 62048

>gb|AF468050.1| Danio rerio laminin beta 4 (lamb4) mRNA, complete cds
          Length = 5943

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  aagtcataacccctctgtct 338
            ||||||||||||||||||||
Sbjct: 1891 aagtcataacccctctgtct 1872

>gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence
          Length = 157430

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   cagcaatttctctcctgact 261
             ||||||||||||||||||||
Sbjct: 19903 cagcaatttctctcctgact 19884

>emb|BX548078.8| Zebrafish DNA sequence from clone CH211-212C13 in linkage group 15,
              complete sequence
          Length = 205316

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 191    tctttttctcttcctctgcaaggaaaca 218
              |||||| ||||| |||||||||||||||
Sbjct: 201366 tcttttgctctttctctgcaaggaaaca 201339

>gb|AC035140.7| Homo sapiens chromosome 5 clone CTD-2631K10, complete sequence
          Length = 61965

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   tctttttctcttcctctgca 210
             ||||||||||||||||||||
Sbjct: 33667 tctttttctcttcctctgca 33686

>gb|AC000079.1| Homo sapiens Chromosome 22q11.2 Cosmid Clone 49c12 In DGCR Region,
             complete sequence
          Length = 39540

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   cagcaatttctctcctgact 261
             ||||||||||||||||||||
Sbjct: 30948 cagcaatttctctcctgact 30929

>gb|AC000068.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 102g9 In DGCR Region,
            complete sequence
          Length = 43934

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cagcaatttctctcctgact 261
            ||||||||||||||||||||
Sbjct: 6599 cagcaatttctctcctgact 6580

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      gaaaccatgcatatttttct 161
                ||||||||||||||||||||
Sbjct: 15324313 gaaaccatgcatatttttct 15324294

>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    ttttctcttcctctgcaagg 213
              ||||||||||||||||||||
Sbjct: 933971 ttttctcttcctctgcaagg 933990

>ref|NM_173276.1| Danio rerio laminin, beta 4 (lamb4), mRNA
          Length = 5943

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  aagtcataacccctctgtct 338
            ||||||||||||||||||||
Sbjct: 1891 aagtcataacccctctgtct 1872

>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   gaaaccatgcatatttttct 161
             ||||||||||||||||||||
Sbjct: 31312 gaaaccatgcatatttttct 31293

>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0475E07
          Length = 139961

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    gaaaccatgcatatttttct 161
              ||||||||||||||||||||
Sbjct: 110326 gaaaccatgcatatttttct 110307


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,525,850
Number of Sequences: 3902068
Number of extensions: 4525850
Number of successful extensions: 83698
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83581
Number of HSP's gapped (non-prelim): 117
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)