ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl03d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, co... 100 7e-18
2gb|BT019137.1| Zea mays clone Contig781.F mRNA sequence 92 2e-15
3gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence 86 1e-13
4gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, pa... 86 1e-13
5ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-exp... 84 4e-13
6gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete... 84 4e-13
7gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 geno... 84 4e-13
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
9dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
10dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
11dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
12dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
13dbj|AK058577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
14gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
15dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
16gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds 64 4e-07
17emb|AL607128.8| Human DNA sequence from clone RP11-444I9 on chro... 44 0.35
18ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-exp... 42 1.4
19gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete... 42 1.4
20gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 42 1.4
21gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, co... 42 1.4
22gb|AC003103.2| Homo sapiens chromosome 17, clone CTC-268N12, com... 42 1.4
23dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
24dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
25dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
26dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
27gb|AC122811.4| Mus musculus BAC clone RP23-281J12 from 12, compl... 40 5.5
28emb|AL354806.22| Human DNA sequence from clone RP11-521J24 on ch... 40 5.5
29gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76... 40 5.5
30gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, r... 40 5.5
31gb|AC111001.4| Homo sapiens BAC clone RP13-933J18 from 4, comple... 40 5.5
32gb|AC112232.5| Homo sapiens BAC clone RP11-166K6 from 4, complet... 40 5.5
33gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosom... 40 5.5
34gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosom... 40 5.5
35emb|BX005481.11| Zebrafish DNA sequence from clone CH211-79C1 in... 40 5.5
36gb|AC108811.12| Mus musculus chromosome 8, clone RP23-284C19, co... 40 5.5
37gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complet... 40 5.5
38gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, compl... 40 5.5 
>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds
          Length = 1479

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 66/70 (94%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                        
Query: 65   ataaattataaaaggcgagagtgggcgggagagcgtatcttgtacgcctgcctcctccat 124
            |||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1382 ataaattataaaag-caacagtgggcgggagagcgtagcttgtacgcctgcctcctccat 1324

                      
Query: 125  tttcccacac 134
            ||||||||||
Sbjct: 1323 tttcccacac 1314
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>gb|BT019137.1| Zea mays clone Contig781.F mRNA sequence
          Length = 1044

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 65/70 (92%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                        
Query: 65   ataaattataaaaggcgagagtgggcgggagagcgtatcttgtacgcctgcctcctccat 124
            |||||||||||||| | | |||||||||||||||| | ||||||||||||||||||||||
Sbjct: 1008 ataaattataaaag-caacagtgggcgggagagcggagcttgtacgcctgcctcctccat 950

                      
Query: 125  tttcccacac 134
            ||||||||||
Sbjct: 949  tttcccacac 940
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>gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence
          Length = 832

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 66/71 (92%), Gaps = 2/71 (2%)
 Strand = Plus / Minus

                                                                       
Query: 65  ataaattataaaaggcgagagtgggcggg-agagcgtatcttgtacgcctgcctcctcca 123
           |||||||||||||| | | |||||||||| |||||||| |||||||||||||||||||||
Sbjct: 748 ataaattataaaag-caacagtgggcggggagagcgtagcttgtacgcctgcctcctcca 690

                      
Query: 124 ttttcccacac 134
           |||||||||||
Sbjct: 689 ttttcccacac 679
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>gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, partial cds
          Length = 907

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 84  agtgggcgggagagcgtatcttgtacgcctgcctcctccattttcccacac 134
           ||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 820 agtgggcgggagagcgtacattgtacgcctgcctcctccattttcccacac 770
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>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4
            (OSJNBa0010C11.2), mRNA
          Length = 1340

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                        
Query: 65   ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
            |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 1227 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 1169

                          
Query: 124  ttttcccacacagc 137
             |||||||||||||
Sbjct: 1168 -tttcccacacagc 1156
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>gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete cds
          Length = 1249

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                        
Query: 65   ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
            |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 1183 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 1125

                          
Query: 124  ttttcccacacagc 137
             |||||||||||||
Sbjct: 1124 -tttcccacacagc 1112
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>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
             sequence
          Length = 147117

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                         
Query: 65    ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
             |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 17029 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 16971

                           
Query: 124   ttttcccacacagc 137
              |||||||||||||
Sbjct: 16970 -tttcccacacagc 16958
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                            
Query: 65       ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
                |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 21342016 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 21341958

                              
Query: 124      ttttcccacacagc 137
                 |||||||||||||
Sbjct: 21341957 -tttcccacacagc 21341945



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 115      cctcctccattttcccacaca 135
                |||||||||||||||||||||
Sbjct: 21311100 cctcctccattttcccacaca 21311120
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>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full
            insert sequence
          Length = 1290

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                        
Query: 65   ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
            |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 1240 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 1182

                          
Query: 124  ttttcccacacagc 137
             |||||||||||||
Sbjct: 1181 -tttcccacacagc 1169
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>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full
            insert sequence
          Length = 1266

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                        
Query: 65   ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
            |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 1233 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 1175

                          
Query: 124  ttttcccacacagc 137
             |||||||||||||
Sbjct: 1174 -tttcccacacagc 1162
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>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full
            insert sequence
          Length = 1475

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                        
Query: 65   ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
            |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 1421 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 1363

                          
Query: 124  ttttcccacacagc 137
             |||||||||||||
Sbjct: 1362 -tttcccacacagc 1350
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>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full
            insert sequence
          Length = 1293

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                        
Query: 65   ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
            |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 1239 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 1181

                          
Query: 124  ttttcccacacagc 137
             |||||||||||||
Sbjct: 1180 -tttcccacacagc 1168
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>dbj|AK058577.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F03, full
           insert sequence
          Length = 979

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                       
Query: 65  ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
           |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 241 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 183

                         
Query: 124 ttttcccacacagc 137
            |||||||||||||
Sbjct: 182 -tttcccacacagc 170
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                            
Query: 65       ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
                |||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 21353279 ataaattataaaag-cgagagtgggcgggagagcgtaaccttgtacgcctacctcctcca 21353221

                              
Query: 124      ttttcccacacagc 137
                 |||||||||||||
Sbjct: 21353220 -tttcccacacagc 21353208



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 115      cctcctccattttcccacaca 135
                |||||||||||||||||||||
Sbjct: 21322364 cctcctccattttcccacaca 21322384
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>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full
            insert sequence
          Length = 1883

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/74 (91%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                        
Query: 65   ataaattataaaaggcgagagtgggcgggagagcgt-atcttgtacgcctgcctcctcca 123
            |||||||||||||| ||||||||||||||||||| | | ||||||||||| |||||||||
Sbjct: 1817 ataaattataaaag-cgagagtgggcgggagagcataaccttgtacgcctacctcctcca 1759

                          
Query: 124  ttttcccacacagc 137
             |||||||||||||
Sbjct: 1758 -tttcccacacagc 1746
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>gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds
          Length = 948

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 337 acttgaccgtagcagctagctgcgtagtagcattac 372
           |||||||||||||||||||| |||||||||||||||
Sbjct: 948 acttgaccgtagcagctagccgcgtagtagcattac 913
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>emb|AL607128.8| Human DNA sequence from clone RP11-444I9 on chromosome 10 Contains a
             novel gene (FLJ14374), a CDA11 protein (CDA11) pseudogene
             and two novel genes, complete sequence
          Length = 134242

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 133   acagcccttttcccatttgcca 154
             ||||||||||||||||||||||
Sbjct: 31635 acagcccttttcccatttgcca 31614
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>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6
            (OSJNBb0014I11.3), mRNA
          Length = 1240

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 115  cctcctccattttcccacaca 135
            |||||||||||||||||||||
Sbjct: 1125 cctcctccattttcccacaca 1105
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>gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete cds
          Length = 1250

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 115  cctcctccattttcccacaca 135
            |||||||||||||||||||||
Sbjct: 1118 cctcctccattttcccacaca 1098
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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
             sequence
          Length = 135510

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 115   cctcctccattttcccacaca 135
             |||||||||||||||||||||
Sbjct: 23259 cctcctccattttcccacaca 23239
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>gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, complete sequence
          Length = 135692

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 114   gcctcctccattttcccacacagcc 138
             |||||||||||| ||||||||||||
Sbjct: 19002 gcctcctccattatcccacacagcc 19026
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>gb|AC003103.2| Homo sapiens chromosome 17, clone CTC-268N12, complete sequence
          Length = 101800

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 114  gcctcctccattttcccacacagcc 138
            |||||||||||| ||||||||||||
Sbjct: 3415 gcctcctccattatcccacacagcc 3391
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>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full
            insert sequence
          Length = 1257

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 115  cctcctccattttcccacaca 135
            |||||||||||||||||||||
Sbjct: 1138 cctcctccattttcccacaca 1118
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>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full
            insert sequence
          Length = 1257

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 115  cctcctccattttcccacaca 135
            |||||||||||||||||||||
Sbjct: 1138 cctcctccattttcccacaca 1118
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>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full
            insert sequence
          Length = 1263

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 115  cctcctccattttcccacaca 135
            |||||||||||||||||||||
Sbjct: 1144 cctcctccattttcccacaca 1124
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>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full
            insert sequence
          Length = 1259

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 115  cctcctccattttcccacaca 135
            |||||||||||||||||||||
Sbjct: 1140 cctcctccattttcccacaca 1120
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>gb|AC122811.4| Mus musculus BAC clone RP23-281J12 from 12, complete sequence
          Length = 169618

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    acctttttctcacctagaaa 250
              ||||||||||||||||||||
Sbjct: 164946 acctttttctcacctagaaa 164927
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>emb|AL354806.22| Human DNA sequence from clone RP11-521J24 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 198959

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tactatataaattataaaag 78
              ||||||||||||||||||||
Sbjct: 103980 tactatataaattataaaag 103999
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>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete
              sequence
          Length = 287397

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    cacacccacccaaccagata 285
              ||||||||||||||||||||
Sbjct: 220382 cacacccacccaaccagata 220401
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>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone
              BACR09L14, complete sequence
          Length = 167368

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    cacacccacccaaccagata 285
              ||||||||||||||||||||
Sbjct: 130202 cacacccacccaaccagata 130221
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>gb|AC111001.4| Homo sapiens BAC clone RP13-933J18 from 4, complete sequence
          Length = 119175

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   cccaaccaaacctttttctc 241
             ||||||||||||||||||||
Sbjct: 66963 cccaaccaaacctttttctc 66944
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>gb|AC112232.5| Homo sapiens BAC clone RP11-166K6 from 4, complete sequence
          Length = 171050

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   cccaaccaaacctttttctc 241
             ||||||||||||||||||||
Sbjct: 62556 cccaaccaaacctttttctc 62537
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>gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosome 10, complete sequence
          Length = 178780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    ccattttcccacacagccct 140
              ||||||||||||||||||||
Sbjct: 145284 ccattttcccacacagccct 145303
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>gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosome 10, complete
             sequence
          Length = 222344

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   ccattttcccacacagccct 140
             ||||||||||||||||||||
Sbjct: 51859 ccattttcccacacagccct 51878
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>emb|BX005481.11| Zebrafish DNA sequence from clone CH211-79C1 in linkage group 1,
             complete sequence
          Length = 170604

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   acctttttctcacctagaaa 250
             ||||||||||||||||||||
Sbjct: 84168 acctttttctcacctagaaa 84149
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>gb|AC108811.12| Mus musculus chromosome 8, clone RP23-284C19, complete sequence
          Length = 212270

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   cacacacccacccaaccaga 283
             ||||||||||||||||||||
Sbjct: 69354 cacacacccacccaaccaga 69335
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>gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complete sequence
          Length = 175729

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   acctttttctcacctagaaa 250
             ||||||||||||||||||||
Sbjct: 59629 acctttttctcacctagaaa 59610
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>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence
          Length = 198383

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   actcatctctcacttcccta 181
             ||||||||||||||||||||
Sbjct: 85085 actcatctctcacttcccta 85104


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,952,854
Number of Sequences: 3902068
Number of extensions: 2952854
Number of successful extensions: 63196
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63068
Number of HSP's gapped (non-prelim): 103
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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