>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  113 bits (57), Expect = 5e-22
 Identities = 141/169 (83%)
 Strand = Plus / Plus

                                                                           
Query: 279     tctatctttggttttgatctgtggctggattgcttgtagctgatgatgctggcaccctgc 338
               ||||||||||| |||| ||||  ||||| ||||| || |||||||||| || |  |||||
Sbjct: 8420453 tctatctttggatttggtctgcagctgggttgctagttgctgatgatgttgacgtcctgc 8420512

                                                                           
Query: 339     cgttggccaccccattttccactggagcaggcgttccccacttcccgtcggactccaacg 398
               | |||| |||||| ||||||   ||||  | ||||||||||||||| ||||||||||| |
Sbjct: 8420513 cattgggcaccccgttttccgtgggaggcgtcgttccccacttcccttcggactccaagg 8420572

                                                                
Query: 399     gctccatcactttaacagatccatctgacagcccgactgcgaattgatt 447
               | || ||||||||||||||||||||||| ||||| || || ||||||||
Sbjct: 8420573 gttcaatcactttaacagatccatctgaaagcccaaccgcaaattgatt 8420621

>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0705D01
          Length = 147174

 Score =  113 bits (57), Expect = 5e-22
 Identities = 141/169 (83%)
 Strand = Plus / Plus

                                                                         
Query: 279   tctatctttggttttgatctgtggctggattgcttgtagctgatgatgctggcaccctgc 338
             ||||||||||| |||| ||||  ||||| ||||| || |||||||||| || |  |||||
Sbjct: 35408 tctatctttggatttggtctgcagctgggttgctagttgctgatgatgttgacgtcctgc 35467

                                                                         
Query: 339   cgttggccaccccattttccactggagcaggcgttccccacttcccgtcggactccaacg 398
             | |||| |||||| ||||||   ||||  | ||||||||||||||| ||||||||||| |
Sbjct: 35468 cattgggcaccccgttttccgtgggaggcgtcgttccccacttcccttcggactccaagg 35527

                                                              
Query: 399   gctccatcactttaacagatccatctgacagcccgactgcgaattgatt 447
             | || ||||||||||||||||||||||| ||||| || || ||||||||
Sbjct: 35528 gttcaatcactttaacagatccatctgaaagcccaaccgcaaattgatt 35576

>dbj|AK111762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061P18, full
            insert sequence
          Length = 4125

 Score =  113 bits (57), Expect = 5e-22
 Identities = 141/169 (83%)
 Strand = Plus / Minus

                                                                        
Query: 279  tctatctttggttttgatctgtggctggattgcttgtagctgatgatgctggcaccctgc 338
            ||||||||||| |||| ||||  ||||| ||||| || |||||||||| || |  |||||
Sbjct: 3667 tctatctttggatttggtctgcagctgggttgctagttgctgatgatgttgacgtcctgc 3608

                                                                        
Query: 339  cgttggccaccccattttccactggagcaggcgttccccacttcccgtcggactccaacg 398
            | |||| |||||| ||||||   ||||  | ||||||||||||||| ||||||||||| |
Sbjct: 3607 cattgggcaccccgttttccgtgggaggcgtcgttccccacttcccttcggactccaagg 3548

                                                             
Query: 399  gctccatcactttaacagatccatctgacagcccgactgcgaattgatt 447
            | || ||||||||||||||||||||||| ||||| || || ||||||||
Sbjct: 3547 gttcaatcactttaacagatccatctgaaagcccaaccgcaaattgatt 3499

>ref|NM_187885.1| Oryza sativa (japonica cultivar-group), Ozsa8327 predicted mRNA
          Length = 2793

 Score =  111 bits (56), Expect = 2e-21
 Identities = 140/168 (83%)
 Strand = Plus / Minus

                                                                        
Query: 280  ctatctttggttttgatctgtggctggattgcttgtagctgatgatgctggcaccctgcc 339
            |||||||||| |||| ||||  ||||| ||||| || |||||||||| || |  ||||||
Sbjct: 2793 ctatctttggatttggtctgcagctgggttgctagttgctgatgatgttgacgtcctgcc 2734

                                                                        
Query: 340  gttggccaccccattttccactggagcaggcgttccccacttcccgtcggactccaacgg 399
             |||| |||||| ||||||   ||||  | ||||||||||||||| ||||||||||| ||
Sbjct: 2733 attgggcaccccgttttccgtgggaggcgtcgttccccacttcccttcggactccaaggg 2674

                                                            
Query: 400  ctccatcactttaacagatccatctgacagcccgactgcgaattgatt 447
             || ||||||||||||||||||||||| ||||| || || ||||||||
Sbjct: 2673 ttcaatcactttaacagatccatctgaaagcccaaccgcaaattgatt 2626

>gb|AY107887.1| Zea mays PCO065735 mRNA sequence
          Length = 1359

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                       
Query: 362 ggagcaggcgttccccacttcccgtcggactccaacggctccatcactttaacagatcca 421
           ||||| |||| |||||| ||||| ||||||||||| ||||||| |||||| || || |||
Sbjct: 986 ggagcgggcgctccccatttcccttcggactccaatggctccagcactttgacggaccca 927

                                                       
Query: 422 tctgacagcccgactgcgaattgatttggttcttggggatgtgc 465
           |||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 926 tctgacagcccgaccgcaaattggtttggctcgtggggatgtgc 883

>ref|NM_112557.3| Arabidopsis thaliana unknown protein AT3G16830 mRNA, complete cds
          Length = 3812

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 398  ggctccatcactttaacagatccatctgacagcccgactgcgaattgatttggttcttgg 457
            ||||| ||||||||||| || ||||| ||||| || || || |||||||| |||||||| 
Sbjct: 3444 ggctcaatcactttaaccgaaccatcagacagtccaaccgctaattgattcggttcttgt 3385

                 
Query: 458  ggatg 462
            |||||
Sbjct: 3384 ggatg 3380

>gb|AY074277.1| Arabidopsis thaliana At3g16830 mRNA sequence
          Length = 3792

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 398  ggctccatcactttaacagatccatctgacagcccgactgcgaattgatttggttcttgg 457
            ||||| ||||||||||| || ||||| ||||| || || || |||||||| |||||||| 
Sbjct: 3442 ggctcaatcactttaaccgaaccatcagacagtccaaccgctaattgattcggttcttgt 3383

                 
Query: 458  ggatg 462
            |||||
Sbjct: 3382 ggatg 3378

>dbj|AB028608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K20I9
          Length = 43500

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 398   ggctccatcactttaacagatccatctgacagcccgactgcgaattgatttggttcttgg 457
             ||||| ||||||||||| || ||||| ||||| || || || |||||||| |||||||| 
Sbjct: 23995 ggctcaatcactttaaccgaaccatcagacagtccaaccgctaattgattcggttcttgt 23936

                  
Query: 458   ggatg 462
             |||||
Sbjct: 23935 ggatg 23931

>gb|AC156496.10| Mus musculus chromosome 7, clone RP24-246N21, complete sequence
          Length = 143815

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 166   tcacaatctacaacataaacaca 188
             |||||||||||||||||||||||
Sbjct: 60342 tcacaatctacaacataaacaca 60320

>emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chromosome 10 Contains part
              of the gene for alpha-catenin-like protein (MGC26194)
              (VR22), complete sequence
          Length = 163119

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 317    gctgatgatgctggcaccctg 337
              |||||||||||||||||||||
Sbjct: 149576 gctgatgatgctggcaccctg 149596

>gb|AC121095.16| Mus musculus chromosome 14, clone RP24-324H17, complete sequence
          Length = 142953

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    cattttccactggagcaggc 370
              ||||||||||||||||||||
Sbjct: 117418 cattttccactggagcaggc 117399

>gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
             SR4
          Length = 87724

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   tatcacaaaataatcactca 145
             ||||||||||||||||||||
Sbjct: 65297 tatcacaaaataatcactca 65316

>ref|XM_719200.1| Plasmodium yoelii yoelii str. 17XNL ubiquitin-like protein Dsk2
           (PY04045) partial mRNA
          Length = 1134

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 286 ttggttttgatctgtggctggattgctt 313
           ||||||||||||||| |||| |||||||
Sbjct: 297 ttggttttgatctgttgctgaattgctt 270

>gb|AC109619.11| Mus musculus chromosome 19, clone RP23-427F6, complete sequence
          Length = 170072

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   tggttcttggggatgtgcag 467
             ||||||||||||||||||||
Sbjct: 74385 tggttcttggggatgtgcag 74404

>gb|AC157380.6| Mus musculus chromosome 3, clone RP23-404C21, complete sequence
          Length = 196528

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      aaaaatggatgcaaaaccat 24
              ||||||||||||||||||||
Sbjct: 109072 aaaaatggatgcaaaaccat 109053

>emb|AL512422.19| Human DNA sequence from clone RP11-472M19 on chromosome 6 Contains part
             of the BPAG1 gene for bullous pemphigoid antigen 1
             (230/240kD), a novel gene, a ribosomal protein L17 (RPL17)
             pseudogene and three CpG islands, complete sequence
          Length = 157918

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   caccccattttccactggag 365
             ||||||||||||||||||||
Sbjct: 31685 caccccattttccactggag 31666

>emb|AL356057.12| Human DNA sequence from clone RP11-474L11 on chromosome 6 contains the 5'
              end of the SUSP1 gene for SUMO-1-specific protease, the 5'
              end of a novel gene, a pseudogene similar to part of
              FLJ14463 and a CpG island, complete sequence
          Length = 184909

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 443    tgatttggttcttggggatgtgca 466
              ||||||||| ||||||||||||||
Sbjct: 134881 tgatttggtccttggggatgtgca 134858

>emb|AL162385.16| Human DNA sequence from clone RP11-244N9 on chromosome 9 Contains the
             3' end of the gene for tudor repeat associator with
             PCTAIRE 2 (PCTAIRE2BP), the TMOD gene for  tropomodulin
             (ETMOD, D9S57E), the 5' end of the NCBP1 gene for nuclear
             cap binding protein subunit 1, 80kDa (NCBP, CBP80), two
             novel genes,  a novel gene PP1489 (LOC158427),  and four
             CpG islands, complete sequence
          Length = 175517

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   atgcatctatctttggtttt 293
             ||||||||||||||||||||
Sbjct: 47165 atgcatctatctttggtttt 47184

>emb|AL161622.12| Human DNA sequence from clone RP3-402H5 on chromosome 6p12.3-21.1
            Contains the 3' end of a gene for a  novel protein
            similar to seven transmembrane receptor (Rhodopsin
            family), complete sequence
          Length = 131967

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  catgcgggtgacaagatttt 259
            ||||||||||||||||||||
Sbjct: 8697 catgcgggtgacaagatttt 8678

>gb|AC125503.3| Oryctolagus cuniculus clone LB1-115H21, complete sequence
          Length = 176296

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 228   agctgacaccaacatgcgggtgac 251
             ||||||||||||||||| ||||||
Sbjct: 73107 agctgacaccaacatgctggtgac 73130

>emb|Y17911.1|ATH17911 Arabidopsis thaliana cngc3 gene
          Length = 3030

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 256  ttttacaattaactcaacatgcat 279
            ||||| ||||||||||||||||||
Sbjct: 2549 ttttataattaactcaacatgcat 2526

>gb|AC154487.2| Mus musculus BAC clone RP24-119I4 from chromosome 14, complete sequence
          Length = 199036

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   cattttccactggagcaggc 370
             ||||||||||||||||||||
Sbjct: 12466 cattttccactggagcaggc 12447

>gb|AC025198.12| Homo sapiens chromosome 17, clone RP11-766H1, complete sequence
          Length = 198524

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   ctgatgatgctggcaccctg 337
             ||||||||||||||||||||
Sbjct: 81496 ctgatgatgctggcaccctg 81477

>gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C10 map CIC02E07, complete
             sequence
          Length = 95214

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   ttttacaattaactcaacatgcat 279
             ||||| ||||||||||||||||||
Sbjct: 44515 ttttataattaactcaacatgcat 44492

>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 228     agctgacaccaacatgcgggtgac 251
               ||||||||||||||||| ||||||
Sbjct: 1502553 agctgacaccaacatgctggtgac 1502576

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 44       tgcatcaagatacctaatgc 63
                ||||||||||||||||||||
Sbjct: 13477029 tgcatcaagatacctaatgc 13477048

>gb|AC027657.2|AC027657 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040H08,
             complete sequence
          Length = 125679

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    tgcatcaagatacctaatgc 63
             ||||||||||||||||||||
Sbjct: 61700 tgcatcaagatacctaatgc 61719

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 44       tgcatcaagatacctaatgc 63
                ||||||||||||||||||||
Sbjct: 13484371 tgcatcaagatacctaatgc 13484390


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,165,560
Number of Sequences: 3902068
Number of extensions: 4165560
Number of successful extensions: 75722
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75574
Number of HSP's gapped (non-prelim): 144
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)