>ref|XM_626340.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_1130),
           partial mRNA
          Length = 2046

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 76  agctaattatctcaaatacattacaac 102
           |||||||||||||||||||||| ||||
Sbjct: 923 agctaattatctcaaatacatttcaac 949

>gb|AC040171.4| Homo sapiens chromosome 16 clone RP11-52D13, complete sequence
          Length = 151368

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 117   tacatgacaacatgtgatatacaaat 142
             ||||||||||||||||||| ||||||
Sbjct: 89296 tacatgacaacatgtgatagacaaat 89271

>emb|AL954711.3| Human DNA sequence from clone RP11-666A1 on chromosome 1 Contains two
             novel pseudogenes, two novel genes, a profilin 1 (PFN1)
             pseudogene, a peptidylprolyl isomerase A (cyclophilin A)
             (PPIA) pseudogene and three CpG islands, complete sequence
          Length = 172789

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     ttgggttcaaaataactaaag 22
             |||||||||||||||||||||
Sbjct: 38109 ttgggttcaaaataactaaag 38089

>emb|AL592284.10| Human DNA sequence from clone RP11-640M9 on chromosome 1 Contains a novel
              gene, the 5' end of a novel gene a profilin 1 (PFN1)
              pseudogene and a CpG island, complete sequence
          Length = 170669

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      ttgggttcaaaataactaaag 22
              |||||||||||||||||||||
Sbjct: 138350 ttgggttcaaaataactaaag 138330

>gb|AC137783.3| Homo sapiens chromosome 16 clone RP11-124P23, complete sequence
          Length = 198742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      ttgggttcaaaataactaaag 22
              |||||||||||||||||||||
Sbjct: 140233 ttgggttcaaaataactaaag 140253

>gb|AC128674.3| Homo sapiens BAC clone RP11-1390M18 from UL, complete sequence
          Length = 202721

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     ttgggttcaaaataactaaag 22
             |||||||||||||||||||||
Sbjct: 49816 ttgggttcaaaataactaaag 49796

>gb|AC127384.4| Homo sapiens BAC clone RP11-1390A11 from UL, complete sequence
          Length = 202837

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      ttgggttcaaaataactaaag 22
              |||||||||||||||||||||
Sbjct: 194293 ttgggttcaaaataactaaag 194313

>emb|AL773538.7| Mouse DNA sequence from clone RP23-14I24 on chromosome 2, complete
             sequence
          Length = 178544

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 252   gtaagttgtaactattaaata 272
             |||||||||||||||||||||
Sbjct: 32643 gtaagttgtaactattaaata 32663

>gb|AC159238.2| Mus musculus BAC clone RP24-477O8 from chromosome 12, complete sequence
          Length = 176407

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    ttgatcatatatgctgactg 235
              ||||||||||||||||||||
Sbjct: 127799 ttgatcatatatgctgactg 127818

>gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, complete sequence
          Length = 179390

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   atagtaaggttgtaacattt 352
             ||||||||||||||||||||
Sbjct: 66111 atagtaaggttgtaacattt 66130

>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE
          Length = 123473

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 277  caaagatctacaaaggcatataac 300
            ||||| ||||||||||||||||||
Sbjct: 3883 caaagttctacaaaggcatataac 3860

>gb|AC151740.21| Medicago truncatula clone mth2-82n16, complete sequence
          Length = 131700

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    caagttcatgtatgaacagc 78
             ||||||||||||||||||||
Sbjct: 72067 caagttcatgtatgaacagc 72086

>gb|AC146971.16| Medicago truncatula clone mth2-128d1, complete sequence
          Length = 125569

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 277    caaagatctacaaaggcatataac 300
              ||||| ||||||||||||||||||
Sbjct: 123297 caaagttctacaaaggcatataac 123274

>gb|AC107626.2| Homo sapiens chromosome 3 clone RP11-1008M1, complete sequence
          Length = 179484

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     agttcatgtatgaacagcta 80
              ||||||||||||||||||||
Sbjct: 161081 agttcatgtatgaacagcta 161100

>dbj|AB019232.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIL23
          Length = 80818

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   aataccctcgtaagttgtaactat 266
             |||||||| |||||||||||||||
Sbjct: 63492 aatacccttgtaagttgtaactat 63515

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aaaataactaaagcgatttt 29
              ||||||||||||||||||||
Sbjct: 343794 aaaataactaaagcgatttt 343813

>gb|AC163357.5| Mus musculus BAC clone RP23-3K10 from chromosome 12, complete sequence
          Length = 236266

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   atagtaaggttgtaacattt 352
             ||||||||||||||||||||
Sbjct: 55668 atagtaaggttgtaacattt 55649


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,276,265
Number of Sequences: 3902068
Number of extensions: 3276265
Number of successful extensions: 62396
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62342
Number of HSP's gapped (non-prelim): 54
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)