Clone Name | rbastl03b12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SYFB_MYCTU (P94985) Phenylalanyl-tRNA synthetase beta chain (EC ... | 28 | 7.7 | 2 | SYFB_MYCBO (Q7VEV3) Phenylalanyl-tRNA synthetase beta chain (EC ... | 28 | 7.7 |
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>SYFB_MYCTU (P94985) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 831 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +3 Query: 96 DTSDTQSSFCSFDAACLSR----IYLTSK*TAAAQNTVDPTASLRKLNKIRGLLAD 251 D++D +D A +SR ++L S+ + TVDP S+ L++ LLAD Sbjct: 337 DSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLAD 392
>SYFB_MYCBO (Q7VEV3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 831 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +3 Query: 96 DTSDTQSSFCSFDAACLSR----IYLTSK*TAAAQNTVDPTASLRKLNKIRGLLAD 251 D++D +D A +SR ++L S+ + TVDP S+ L++ LLAD Sbjct: 337 DSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLAD 392 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,198,980 Number of Sequences: 219361 Number of extensions: 1129268 Number of successful extensions: 2428 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2365 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2428 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)