ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl03b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
2dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
3dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
4dbj|AK067618.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
5gb|AC131733.3| Mus musculus BAC clone RP23-98C9 from 8, complete... 44 0.38
6gb|AC167245.2| Mus musculus BAC clone RP23-421F2 from chromosome... 42 1.5
7gb|AC164422.2| Mus musculus chromosome 19, clone RP23-407G6, com... 42 1.5
8gb|AC006956.16| Mus musculus Chromosome 19 BAC Clone 7d23, compl... 42 1.5
9gb|AF525504.1| Fusobacterium nucleatum ppGpp gene, complete cds 42 1.5
10gb|AC010557.4| Drosophila melanogaster 3L BAC RP98-9E21 (Roswell... 42 1.5
11gb|AE003559.3| Drosophila melanogaster chromosome 3L, section 26... 42 1.5
12ref|NM_128021.1| Arabidopsis thaliana protein binding AT2G24600 ... 40 6.0
13ref|NM_201799.1| Arabidopsis thaliana protein binding AT2G24600 ... 40 6.0
14ref|NM_179724.2| Arabidopsis thaliana protein binding AT2G24600 ... 40 6.0
15gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, com... 40 6.0
16ref|XM_524404.1| PREDICTED: Pan troglodytes similar to NACHT, le... 40 6.0
17gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, co... 40 6.0
18ref|XM_879403.1| PREDICTED: Bos taurus similar to arginyl-tRNA s... 40 6.0
19ref|XM_879372.1| PREDICTED: Bos taurus similar to arginyl-tRNA s... 40 6.0
20ref|XM_879344.1| PREDICTED: Bos taurus similar to arginyl-tRNA s... 40 6.0
21ref|XM_582733.2| PREDICTED: Bos taurus similar to arginyl-tRNA s... 40 6.0
22ref|NM_025936.1| Mus musculus arginyl-tRNA synthetase (Rars), mRNA 40 6.0
23gb|AC006353.3| Homo sapiens PAC clone RP5-1062J16 from 7, comple... 40 6.0
24gb|BC016443.1| Homo sapiens NACHT, leucine rich repeat and PYD c... 40 6.0
25gb|AY389348.1| Homo sapiens LDL receptor adaptor protein (ARH) g... 40 6.0
26gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, co... 40 6.0
27gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete se... 40 6.0
28emb|AL450328.6| Human DNA sequence from clone RP11-193H22 on chr... 40 6.0
29emb|AL355001.20| Human DNA sequence from clone RP11-61K9 on chro... 40 6.0
30emb|AL353787.21| Human DNA sequence from clone RP11-667H17 on ch... 40 6.0
31emb|AL354952.12| Human DNA sequence from clone RP11-536I1 on chr... 40 6.0
32emb|AL138898.19| Human DNA sequence from clone RP11-401F24 on ch... 40 6.0
33emb|AL135789.18| Human DNA sequence from clone RP11-412H14 on ch... 40 6.0
34gb|AY096459.1| Arabidopsis thaliana unknown protein (At2g24600) ... 40 6.0
35gb|AY056204.1| Arabidopsis thaliana unknown protein (At2g24600) ... 40 6.0
36gb|AY072792.1| Homo sapiens PAAD and NACHT-containing protein 2 ... 40 6.0
37gb|BC050326.1| Homo sapiens NACHT, leucine rich repeat and PYD c... 40 6.0
38emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chr... 40 6.0
39emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chr... 40 6.0
40gb|AF479747.1| Homo sapiens PYRIN-containing APAF1-like protein ... 40 6.0
41dbj|AK056688.1| Homo sapiens cDNA FLJ32126 fis, clone PEBLM20001... 40 6.0
42gb|AC112242.3| Homo sapiens BAC clone RP11-503L23 from 4, comple... 40 6.0
43gb|AC006954.8| Arabidopsis thaliana chromosome 2 clone F25P17 ma... 40 6.0
44gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, compl... 40 6.0
45gb|AF482706.1| Homo sapiens ribonuclease inhibitor 2 (RNH2) mRNA... 40 6.0
46dbj|AK151966.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.0
47dbj|AK149856.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.0
48gb|AC013458.5| Homo sapiens BAC clone RP11-85M11 from 3, complet... 40 6.0
49ref|NM_134444.3| Homo sapiens NACHT, leucine rich repeat and PYD... 40 6.0
50dbj|AK160216.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 6.0
51dbj|AK152108.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.0
52gb|AF442488.1|AF442488 Homo sapiens NALP4 mRNA, complete cds 40 6.0
53dbj|AK168194.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length... 40 6.0
54emb|BX572623.8| Human DNA sequence from clone XXyac-22CH10 on ch... 40 6.0
55dbj|AK166097.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 40 6.0
56gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, com... 40 6.0
57dbj|AK076160.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN... 40 6.0
58gb|AC153483.2| Homo sapiens chromosome 16 clone WI2-2588B13, com... 40 6.0
59dbj|AK011383.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 6.0
60gb|AC106743.4| Homo sapiens chromosome 16 clone RP11-116D9, comp... 40 6.0
61emb|BX819812.1|CNS0A84E Arabidopsis thaliana Full-length cDNA Co... 40 6.0
62gb|AC097375.3| Homo sapiens BAC clone RP11-73G16 from 4, complet... 40 6.0
63gb|AC009506.5| Homo sapiens BAC clone RP11-542H1 from 2, complet... 40 6.0
64gb|AC109134.2| Homo sapiens chromosome 16 clone CTD-2343L8, comp... 40 6.0
65ref|XM_213276.3| PREDICTED: Rattus norvegicus arginyl-tRNA synth... 40 6.0
66dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome 40 6.0
67emb|AL929026.10| Mouse DNA sequence from clone RP23-332K7 on chr... 40 6.0
68gb|AC020647.9|AC020647 Homo sapiens 12 BAC RP11-922O23 (Roswell ... 40 6.0
69gb|BC020132.1| Mus musculus arginyl-tRNA synthetase, mRNA (cDNA ... 40 6.0
70emb|BX511028.13| Zebrafish DNA sequence from clone DKEY-161N17 i... 40 6.0
71emb|CT025710.9| Mouse DNA sequence from clone RP23-261P14 on chr... 40 6.0
72gb|BC021272.2| Homo sapiens cDNA clone IMAGE:4811303, containing... 40 6.0
73gb|BC012789.2| Homo sapiens cDNA clone IMAGE:3957172, containing... 40 6.0 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 142      agcatccgagcctctgcaaattgtgttgaggccctgagacaccc 185
                |||||| ||||||||||||||||||| || |||| |||||||||
Sbjct: 26401885 agcatctgagcctctgcaaattgtgtggaagcccagagacaccc 26401928



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 63       aaggtaagcctacactctgctatgtacc 90
                |||||||||||||| |||||||||||||
Sbjct: 26401827 aaggtaagcctacaatctgctatgtacc 26401854



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 362      ggttaatcttcgtcgcaaaccgtcatg 388
                ||||||||||||||||||||| |||||
Sbjct: 26402193 ggttaatcttcgtcgcaaaccatcatg 26402219
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>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0709F06
          Length = 170964

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 142   agcatccgagcctctgcaaattgtgttgaggccctgagacaccc 185
             |||||| ||||||||||||||||||| || |||| |||||||||
Sbjct: 13924 agcatctgagcctctgcaaattgtgtggaagcccagagacaccc 13967



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 63    aaggtaagcctacactctgctatgtacc 90
             |||||||||||||| |||||||||||||
Sbjct: 13866 aaggtaagcctacaatctgctatgtacc 13893



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 362   ggttaatcttcgtcgcaaaccgtcatg 388
             ||||||||||||||||||||| |||||
Sbjct: 14232 ggttaatcttcgtcgcaaaccatcatg 14258
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>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085J13
          Length = 130185

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 142   agcatccgagcctctgcaaattgtgttgaggccctgagacaccc 185
             |||||| ||||||||||||||||||| || |||| |||||||||
Sbjct: 99612 agcatctgagcctctgcaaattgtgtggaagcccagagacaccc 99655



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 63    aaggtaagcctacactctgctatgtacc 90
             |||||||||||||| |||||||||||||
Sbjct: 99554 aaggtaagcctacaatctgctatgtacc 99581



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 362   ggttaatcttcgtcgcaaaccgtcatg 388
             ||||||||||||||||||||| |||||
Sbjct: 99920 ggttaatcttcgtcgcaaaccatcatg 99946
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>dbj|AK067618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109E09, full
            insert sequence
          Length = 3538

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 142  agcatccgagcctctgcaaattgtgttgaggccctgagacaccc 185
            |||||| ||||||||||||||||||| || |||| |||||||||
Sbjct: 3124 agcatctgagcctctgcaaattgtgtggaagcccagagacaccc 3081



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 63   aaggtaagcctacactctgctatgtacc 90
            |||||||||||||| |||||||||||||
Sbjct: 3182 aaggtaagcctacaatctgctatgtacc 3155



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 362  ggttaatcttcgtcgcaaaccgtcatg 388
            ||||||||||||||||||||| |||||
Sbjct: 2816 ggttaatcttcgtcgcaaaccatcatg 2790
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>gb|AC131733.3| Mus musculus BAC clone RP23-98C9 from 8, complete sequence
          Length = 203486

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 36    taacaacttgagtagaaaagaa 57
             ||||||||||||||||||||||
Sbjct: 94533 taacaacttgagtagaaaagaa 94512
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>gb|AC167245.2| Mus musculus BAC clone RP23-421F2 from chromosome 19, complete sequence
          Length = 198219

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 296   ctcttctgtatctaccttcagcttt 320
             ||||||||| |||||||||||||||
Sbjct: 78019 ctcttctgtctctaccttcagcttt 77995
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>gb|AC164422.2| Mus musculus chromosome 19, clone RP23-407G6, complete sequence
          Length = 212046

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 296   ctcttctgtatctaccttcagcttt 320
             ||||||||| |||||||||||||||
Sbjct: 71629 ctcttctgtctctaccttcagcttt 71605
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>gb|AC006956.16| Mus musculus Chromosome 19 BAC Clone 7d23, complete sequence
          Length = 132397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 296   ctcttctgtatctaccttcagcttt 320
             ||||||||| |||||||||||||||
Sbjct: 39441 ctcttctgtctctaccttcagcttt 39465
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>gb|AF525504.1| Fusobacterium nucleatum ppGpp gene, complete cds
          Length = 2400

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 49   agaaaagaaaaaagaaggtaa 69
            |||||||||||||||||||||
Sbjct: 1857 agaaaagaaaaaagaaggtaa 1877
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>gb|AC010557.4| Drosophila melanogaster 3L BAC RP98-9E21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 169425

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 6      agcaagtcagcagcccaagtt 26
              |||||||||||||||||||||
Sbjct: 110760 agcaagtcagcagcccaagtt 110740
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>gb|AE003559.3| Drosophila melanogaster chromosome 3L, section 26 of 83 of the complete
              sequence
          Length = 269948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 6      agcaagtcagcagcccaagtt 26
              |||||||||||||||||||||
Sbjct: 233861 agcaagtcagcagcccaagtt 233841
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>ref|NM_128021.1| Arabidopsis thaliana protein binding AT2G24600 transcript variant
            AT2G24600.1 mRNA, complete cds
          Length = 1908

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  attttttgcaatggcaggta 271
            ||||||||||||||||||||
Sbjct: 1679 attttttgcaatggcaggta 1660
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>ref|NM_201799.1| Arabidopsis thaliana protein binding AT2G24600 transcript variant
            AT2G24600.3 mRNA, complete cds
          Length = 2187

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  attttttgcaatggcaggta 271
            ||||||||||||||||||||
Sbjct: 1838 attttttgcaatggcaggta 1819
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>ref|NM_179724.2| Arabidopsis thaliana protein binding AT2G24600 transcript variant
            AT2G24600.2 mRNA, complete cds
          Length = 2050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  attttttgcaatggcaggta 271
            ||||||||||||||||||||
Sbjct: 1679 attttttgcaatggcaggta 1660
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>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence
          Length = 205646

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     agaaaagaaaaaagaaggta 68
              ||||||||||||||||||||
Sbjct: 123429 agaaaagaaaaaagaaggta 123448
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>ref|XM_524404.1| PREDICTED: Pan troglodytes similar to NACHT, leucine rich repeat and
            PYD containing 4; NACHT, LRR and PYD containing protein
            4; PYRIN-containing APAF1-like protein 4; PAAD and
            NACHT-containing protein 2; ribonuclease inhibitor 2
            (LOC469019), mRNA
          Length = 2985

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2826 tgaggccctgagacacccag 2845
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>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome
          Length = 706569

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    gtatcatcaattttttgcaa 262
              ||||||||||||||||||||
Sbjct: 560111 gtatcatcaattttttgcaa 560130
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>ref|XM_879403.1| PREDICTED: Bos taurus similar to arginyl-tRNA synthetase,
           transcript variant 5 (LOC506305), mRNA
          Length = 2107

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 323 caagtcagcagcccaagttt 342
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>ref|XM_879372.1| PREDICTED: Bos taurus similar to arginyl-tRNA synthetase,
           transcript variant 4 (LOC506305), mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 323 caagtcagcagcccaagttt 342
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>ref|XM_879344.1| PREDICTED: Bos taurus similar to arginyl-tRNA synthetase,
           transcript variant 3 (LOC506305), mRNA
          Length = 2910

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 323 caagtcagcagcccaagttt 342
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>ref|XM_582733.2| PREDICTED: Bos taurus similar to arginyl-tRNA synthetase,
           transcript variant 1 (LOC506305), mRNA
          Length = 2101

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 323 caagtcagcagcccaagttt 342
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>ref|NM_025936.1| Mus musculus arginyl-tRNA synthetase (Rars), mRNA
          Length = 2108

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 336 caagtcagcagcccaagttt 355
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>gb|AC006353.3| Homo sapiens PAC clone RP5-1062J16 from 7, complete sequence
          Length = 158090

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   agagaaacatggcaccaggc 131
             ||||||||||||||||||||
Sbjct: 21894 agagaaacatggcaccaggc 21875
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>gb|BC016443.1| Homo sapiens NACHT, leucine rich repeat and PYD containing 4, mRNA
            (cDNA clone IMAGE:3448931), partial cds
          Length = 1786

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 1355 tgaggccctgagacacccag 1374
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>gb|AY389348.1| Homo sapiens LDL receptor adaptor protein (ARH) gene, complete cds
          Length = 43420

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  agaaaagaaaaaagaaggta 68
           ||||||||||||||||||||
Sbjct: 184 agaaaagaaaaaagaaggta 203
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>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence
          Length = 222905

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    gagtagaaaagaaaaaagaa 64
             ||||||||||||||||||||
Sbjct: 42650 gagtagaaaagaaaaaagaa 42631
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>gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete sequence
          Length = 152468

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     gagtagaaaagaaaaaagaa 64
              ||||||||||||||||||||
Sbjct: 127361 gagtagaaaagaaaaaagaa 127380
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>emb|AL450328.6| Human DNA sequence from clone RP11-193H22 on chromosome 6, complete
              sequence
          Length = 119389

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     ttgagtagaaaagaaaaaag 62
              ||||||||||||||||||||
Sbjct: 106849 ttgagtagaaaagaaaaaag 106868
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>emb|AL355001.20| Human DNA sequence from clone RP11-61K9 on chromosome 13 Contains the
             ZNF237 gene for zinc finger protein 237, a novel gene and
             2 CpG islands, complete sequence
          Length = 82374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    agaaaagaaaaaagaaggta 68
             ||||||||||||||||||||
Sbjct: 53755 agaaaagaaaaaagaaggta 53736
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>emb|AL353787.21| Human DNA sequence from clone RP11-667H17 on chromosome 9 Contains the
             5' end of the SLC28A3 gene for solute carrier family 28
             (sodium-coupled nucleoside transporter), member 3, (CNT3),
             complete sequence
          Length = 83639

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    gagtagaaaagaaaaaagaa 64
             ||||||||||||||||||||
Sbjct: 28671 gagtagaaaagaaaaaagaa 28690
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>emb|AL354952.12| Human DNA sequence from clone RP11-536I1 on chromosome 9 Contains the
            3' end of a pseudogene similar to part of A kinase (PRKA)
            anchor protein 8 (AKAP8), complete sequence
          Length = 54764

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   agaaaagaaaaaagaaggta 68
            ||||||||||||||||||||
Sbjct: 3555 agaaaagaaaaaagaaggta 3536
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>emb|AL138898.19| Human DNA sequence from clone RP11-401F24 on chromosome 10 Contains
             gene FLJ20909, the gene for a novel protein (MGC35403), a
             novel gene (LOC219731), the 3' end of the UPF2 gene for
             UPF2 regulator of nonsense transcripts homolog (yeast)
             (FLJ38872) and four CpG islands, complete sequence
          Length = 206587

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   caccaggcccaggggagcag 143
             ||||||||||||||||||||
Sbjct: 39829 caccaggcccaggggagcag 39810
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>emb|AL135789.18| Human DNA sequence from clone RP11-412H14 on chromosome 9q32-33.3
             Contains the 5' end of one variant of the AKAP2 (PALM2)
             gene for A kinase (PRKA) anchor protein 2 (paralemmin 2)
             and a CpG island, complete sequence
          Length = 133394

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    agaaaagaaaaaagaaggta 68
             ||||||||||||||||||||
Sbjct: 78704 agaaaagaaaaaagaaggta 78685
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>gb|AY096459.1| Arabidopsis thaliana unknown protein (At2g24600) mRNA, complete cds
          Length = 1678

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  attttttgcaatggcaggta 271
            ||||||||||||||||||||
Sbjct: 1569 attttttgcaatggcaggta 1550
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>gb|AY056204.1| Arabidopsis thaliana unknown protein (At2g24600) mRNA, complete cds
          Length = 1924

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  attttttgcaatggcaggta 271
            ||||||||||||||||||||
Sbjct: 1679 attttttgcaatggcaggta 1660
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>gb|AY072792.1| Homo sapiens PAAD and NACHT-containing protein 2 (PAN2) mRNA,
            complete cds
          Length = 3339

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2886 tgaggccctgagacacccag 2905
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>gb|BC050326.1| Homo sapiens NACHT, leucine rich repeat and PYD containing 4, mRNA
            (cDNA clone MGC:48596 IMAGE:4837670), complete cds
          Length = 3365

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2922 tgaggccctgagacacccag 2941
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>emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chromosome 11 Contains the
             Pank3 gene for pantothenate kinase 3, a pseudogene similar
             to part of ribosomal protein L7a (Rpl7a), a pseudogene
             similar to part of fibrillarin (Fbl), the Rars gene for
             arginyl-tRNA synthetase, the 3' end of the gene for a
             novel protein similar to human KIBRA and two CpG islands,
             complete sequence
          Length = 181103

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     caagtcagcagcccaagttt 27
             ||||||||||||||||||||
Sbjct: 73884 caagtcagcagcccaagttt 73865
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>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the
             gene for a novel protein (3732413I11Rik), a novel gene
             (4930597A21Rik), the 5' end of the Ebf1 gene for early
             B-cell factor 1, a novel gene and a CpG island, complete
             sequence
          Length = 215524

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   ggcaccaggcccaggggagc 141
             ||||||||||||||||||||
Sbjct: 69897 ggcaccaggcccaggggagc 69878
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>gb|AF479747.1| Homo sapiens PYRIN-containing APAF1-like protein 4 mRNA, complete cds
          Length = 3368

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2895 tgaggccctgagacacccag 2914
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>dbj|AK056688.1| Homo sapiens cDNA FLJ32126 fis, clone PEBLM2000112, weakly similar to
            Homo sapiens nucleotide-binding site protein 1 mRNA
          Length = 3190

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2775 tgaggccctgagacacccag 2794
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>gb|AC112242.3| Homo sapiens BAC clone RP11-503L23 from 4, complete sequence
          Length = 86519

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    agaaaagaaaaaagaaggta 68
             ||||||||||||||||||||
Sbjct: 85243 agaaaagaaaaaagaaggta 85224
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>gb|AC006954.8| Arabidopsis thaliana chromosome 2 clone F25P17 map mi238, complete
             sequence
          Length = 93701

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   attttttgcaatggcaggta 271
             ||||||||||||||||||||
Sbjct: 53200 attttttgcaatggcaggta 53181
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>gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, complete sequence
          Length = 115767

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   tgaggccctgagacacccag 187
             ||||||||||||||||||||
Sbjct: 71337 tgaggccctgagacacccag 71356
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>gb|AF482706.1| Homo sapiens ribonuclease inhibitor 2 (RNH2) mRNA, complete cds
          Length = 3234

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2893 tgaggccctgagacacccag 2912
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>dbj|AK151966.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830044B19 product:arginyl-tRNA
           synthetase, full insert sequence
          Length = 1928

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 156 caagtcagcagcccaagttt 175
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>dbj|AK149856.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530023I20 product:arginyl-tRNA
           synthetase, full insert sequence
          Length = 2036

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 333 caagtcagcagcccaagttt 352
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>gb|AC013458.5| Homo sapiens BAC clone RP11-85M11 from 3, complete sequence
          Length = 213532

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 32   aagctaacaacttgagtagaaaagaaaa 59
            |||||||||||| | |||||||||||||
Sbjct: 6306 aagctaacaactagggtagaaaagaaaa 6333
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>ref|NM_134444.3| Homo sapiens NACHT, leucine rich repeat and PYD containing 4 (NALP4),
            mRNA
          Length = 3339

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2886 tgaggccctgagacacccag 2905
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>dbj|AK160216.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610037E21 product:arginyl-tRNA
           synthetase, full insert sequence
          Length = 1364

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 333 caagtcagcagcccaagttt 352
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>dbj|AK152108.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830047L20 product:arginyl-tRNA
           synthetase, full insert sequence
          Length = 2104

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 333 caagtcagcagcccaagttt 352
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>gb|AF442488.1|AF442488 Homo sapiens NALP4 mRNA, complete cds
          Length = 3333

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2883 tgaggccctgagacacccag 2902
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>dbj|AK168194.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
           clone:I730064N14 product:arginyl-tRNA synthetase, full
           insert sequence
          Length = 2105

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 333 caagtcagcagcccaagttt 352
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>emb|BX572623.8| Human DNA sequence from clone XXyac-22CH10 on chromosome 1, complete
             sequence
          Length = 112168

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    agaaaagaaaaaagaaggta 68
             ||||||||||||||||||||
Sbjct: 81631 agaaaagaaaaaagaaggta 81650
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>dbj|AK166097.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
           library, clone:G730037M12 product:arginyl-tRNA
           synthetase, full insert sequence
          Length = 2105

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 333 caagtcagcagcccaagttt 352
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>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence
          Length = 256999

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    agaaaagaaaaaagaaggta 68
             ||||||||||||||||||||
Sbjct: 62527 agaaaagaaaaaagaaggta 62546
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>dbj|AK076160.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length
           enriched library, clone:3200002L13 product:ARGINYL-TRNA
           SYNTHETASE (EC 6.1.1.19) (ARGININE--TRNA LIGASE) (ARGRS)
           homolog [Cricetulus longicaudatus], full insert sequence
          Length = 2104

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 333 caagtcagcagcccaagttt 352
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>gb|AC153483.2| Homo sapiens chromosome 16 clone WI2-2588B13, complete sequence
          Length = 39424

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  aatgctcttccatgctactc 341
            ||||||||||||||||||||
Sbjct: 7938 aatgctcttccatgctactc 7919
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>dbj|AK011383.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610011N19 product:ARGINYL-TRNA
           SYNTHETASE (EC 6.1.1.19) (ARGININE--TRNA LIGASE) (ARGRS)
           homolog [Cricetulus longicaudatus], full insert sequence
          Length = 2108

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 336 caagtcagcagcccaagttt 355
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>gb|AC106743.4| Homo sapiens chromosome 16 clone RP11-116D9, complete sequence
          Length = 117710

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  aatgctcttccatgctactc 341
            ||||||||||||||||||||
Sbjct: 4703 aatgctcttccatgctactc 4722
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>emb|BX819812.1|CNS0A84E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS30ZC01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  attttttgcaatggcaggta 271
            ||||||||||||||||||||
Sbjct: 1669 attttttgcaatggcaggta 1650
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>gb|AC097375.3| Homo sapiens BAC clone RP11-73G16 from 4, complete sequence
          Length = 183746

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 49  agaaaagaaaaaagaaggta 68
           ||||||||||||||||||||
Sbjct: 724 agaaaagaaaaaagaaggta 705
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>gb|AC009506.5| Homo sapiens BAC clone RP11-542H1 from 2, complete sequence
          Length = 191764

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 44    tgagtagaaaagaaaaaagaaggt 67
             |||| |||||||||||||||||||
Sbjct: 37428 tgagaagaaaagaaaaaagaaggt 37451
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>gb|AC109134.2| Homo sapiens chromosome 16 clone CTD-2343L8, complete sequence
          Length = 147101

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 aatgctcttccatgctactc 341
           ||||||||||||||||||||
Sbjct: 716 aatgctcttccatgctactc 697
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>ref|XM_213276.3| PREDICTED: Rattus norvegicus arginyl-tRNA synthetase (predicted)
           (Rars_predicted), mRNA
          Length = 2106

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 335 caagtcagcagcccaagttt 354
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>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    gtatcatcaattttttgcaa 262
              ||||||||||||||||||||
Sbjct: 210957 gtatcatcaattttttgcaa 210938
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>emb|AL929026.10| Mouse DNA sequence from clone RP23-332K7 on chromosome 2, complete
             sequence
          Length = 124244

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    gagtagaaaagaaaaaagaa 64
             ||||||||||||||||||||
Sbjct: 40034 gagtagaaaagaaaaaagaa 40053
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>gb|AC020647.9|AC020647 Homo sapiens 12 BAC RP11-922O23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 147720

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    agaaaagaaaaaagaaggta 68
             ||||||||||||||||||||
Sbjct: 58985 agaaaagaaaaaagaaggta 58966
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>gb|BC020132.1| Mus musculus arginyl-tRNA synthetase, mRNA (cDNA clone MGC:28207
           IMAGE:3989952), complete cds
          Length = 2104

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   caagtcagcagcccaagttt 27
           ||||||||||||||||||||
Sbjct: 316 caagtcagcagcccaagttt 335
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>emb|BX511028.13| Zebrafish DNA sequence from clone DKEY-161N17 in linkage group 20,
             complete sequence
          Length = 225010

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   aggggatgcaaaactactac 241
             ||||||||||||||||||||
Sbjct: 44130 aggggatgcaaaactactac 44149
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>emb|CT025710.9| Mouse DNA sequence from clone RP23-261P14 on chromosome 12, complete
              sequence
          Length = 225685

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     gagtagaaaagaaaaaagaa 64
              ||||||||||||||||||||
Sbjct: 151738 gagtagaaaagaaaaaagaa 151719
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>gb|BC021272.2| Homo sapiens cDNA clone IMAGE:4811303, containing frame-shift errors
          Length = 3359

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2887 tgaggccctgagacacccag 2906
to top
>gb|BC012789.2| Homo sapiens cDNA clone IMAGE:3957172, containing frame-shift errors
          Length = 3360

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tgaggccctgagacacccag 187
            ||||||||||||||||||||
Sbjct: 2887 tgaggccctgagacacccag 2906


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,332,296
Number of Sequences: 3902068
Number of extensions: 5332296
Number of successful extensions: 177636
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 177422
Number of HSP's gapped (non-prelim): 214
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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