>VG27_BPMD2 (O64221) Minor tail protein Gp27|
          Length = 336

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 331 IPSTPWHLPPGTECSKHLPPLVQPAVGQWSF 423
           IP  PW  PPG E      P  Q  +  +SF
Sbjct: 216 IPDFPWPFPPGVEIPWETAPFTQFVIPDYSF 246

>TM7S4_HUMAN (Q9H295) Transmembrane 7 superfamily member 4 (Dendritic|
           cell-specific transmembrane protein) (DC-STAMP)
           (IL-4-induced protein) (FIND)
          Length = 470

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
 Frame = -3

Query: 309 VDPASDGMACELE*LG-CCWVCLVNK-----SAAWRILVVLHAAASWFI 181
           V P S G    ++ LG CC V L++      +A W +  ++ AAASW I
Sbjct: 19  VSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFLPSIIAAAASWII 67

>LRRN5_HUMAN (O75325) Leucine-rich repeats neuronal protein 5 precursor (Glioma|
           amplified on chromosome 1 protein)
          Length = 713

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 292 IAGWIYGL*KTILIPSTPWHLPPGTECSKHLPPLVQP 402
           +  W+ G   T  +P  PWH+P   +C+  + P   P
Sbjct: 9   LLAWVAGA--TAAVPVVPWHVPCPPQCACQIRPWYTP 43

>DND1_HUMAN (Q8IYX4) Dead end protein homolog 1 (RNA-binding motif,|
           single-stranded interacting protein 4)
          Length = 353

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -1

Query: 437 HGHPLKDHCPTAGCTSGGKCFEHSVPG 357
           H HPL+  CP   C S  KC E SV G
Sbjct: 119 HNHPLRPSCPLLVCRSTEKC-ELSVDG 144

>CCG8_NEUCR (Q01306) Clock-controlled protein 8|
          Length = 661

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 40  QTHTHTPHQRRIQS*RHAVHCTAMKHL*PHIHHRN 144
           Q H H  HQ+  Q  +H  H  A +H   H HH +
Sbjct: 16  QQHEHQQHQQYQQPPQHHQHYEAPQHQQQHQHHHH 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,541,193
Number of Sequences: 219361
Number of extensions: 851140
Number of successful extensions: 2321
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2318
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)