ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl03a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IL22_MOUSE (Q9JJY9) Interleukin-22 precursor (IL-22) (IL-10-rela... 30 4.4
2IL22B_MOUSE (Q9JJY8) Interleukin-22b precursor (IL-22b) (IL-10-r... 29 5.7
3PLMN_CANFA (P80009) Plasminogen (EC 3.4.21.7) [Contains: Plasmin... 29 7.5
4PLMN_PIG (P06867) Plasminogen precursor (EC 3.4.21.7) [Contains:... 28 9.7

>IL22_MOUSE (Q9JJY9) Interleukin-22 precursor (IL-22) (IL-10-related|
           T-cell-derived-inducible factor) (IL-TIF) (IL-TIF alpha)
           (Interleukin-22a) (IL-22a)
          Length = 179

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 177 SSSILLVVLWAVENSSYPVASWCKVE 254
           +S +LL+ LWA E ++ PV + CK+E
Sbjct: 18  ASCLLLIALWAQEANALPVNTRCKLE 43



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>IL22B_MOUSE (Q9JJY8) Interleukin-22b precursor (IL-22b) (IL-10-related|
           T-cell-derived-inducible factor beta) (IL-TIFb) (IL-TIF
           beta)
          Length = 179

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +3

Query: 177 SSSILLVVLWAVENSSYPVASWCKVE 254
           +S +LL+ LWA E ++ P+ + CK+E
Sbjct: 18  ASCLLLIALWAQEANALPINTRCKLE 43



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>PLMN_CANFA (P80009) Plasminogen (EC 3.4.21.7) [Contains: Plasmin heavy chain|
           A; Plasmin light chain B] (Fragment)
          Length = 333

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = +1

Query: 337 P*CLMENHNVFF*ACKMPQTQSMSFQNSDPDCTFPGLAPVVSPLRIVHG 483
           P C   N    F  C +PQ  S SF     DC  P + P   P R+V G
Sbjct: 64  PWCYTMNQRKLFDYCDVPQCVSTSF-----DCGKPQVEPKKCPGRVVGG 107



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>PLMN_PIG (P06867) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin|
           heavy chain A; Activation peptide; Plasmin heavy chain
           A, short form; Plasmin light chain B]
          Length = 790

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = +1

Query: 337 P*CLMENHNVFF*ACKMPQTQSMSFQNSDPDCTFPGLAPVVSPLRIVHG 483
           P C   N    F  C +PQ  + SF     DC  P + P   P R+V G
Sbjct: 521 PWCYTTNPQKLFDYCDVPQCVTSSF-----DCGKPKVEPKKCPARVVGG 564


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,236,756
Number of Sequences: 219361
Number of extensions: 1688908
Number of successful extensions: 3640
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3639
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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