>PCCB_BACSU (P54541) Putative propionyl-CoA carboxylase beta chain (EC 6.4.1.3)|
           (PCCase) (Propanoyl-CoA:carbon dioxide ligase)
          Length = 506

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 264 DIISSVLFMLHFLPSSERALEGDPELHGPRPLLRRRV 374
           ++++ V  +L +LP + R  E  PE    RPLL R V
Sbjct: 229 EVLTGVRKLLSYLPLNGRTTEPKPEKEASRPLLNRLV 265

>PURL_CORGL (Q8NMI5) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 762

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 55  YNVTGSNLFSHSMVMGRAYVYACVRDEVGNVNPKEERNLFIL 180
           YN TG      + V+G   V   V   +GNV P E+ +L++L
Sbjct: 555 YNQTGDEPILPTPVVGVLGVLDNVEQSIGNVLPSEDNDLYLL 596

>RNFD_VIBPA (Q87MX1) Electron transport complex protein rnfD|
          Length = 348

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +1

Query: 7   IIFLALIDFIVIVNYIYNVTGSNLFSHSMVMGRAYV 114
           II + LI  IVI  ++Y   G NLF+ +MV   AYV
Sbjct: 97  IIVIGLIFAIVIAKHLYGGIGQNLFNPAMV---AYV 129

>YH93_SCHPO (O74728) Hypothetical protein C1709.03 in chromosome II|
          Length = 398

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
 Frame = +1

Query: 289 CYTSFLRQSVPSKVTRSCTGHGRC-----CDGALARPCSILITSTVSSR 420
           CY S   +   SK T  C+GHGRC      D      CS  + S  + +
Sbjct: 289 CYIS---EEACSKATNDCSGHGRCSKYGQLDSCYVCQCSNSVVSNAAGQ 334


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,453,290
Number of Sequences: 219361
Number of extensions: 867155
Number of successful extensions: 2617
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2615
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)