>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score =  115 bits (58), Expect = 8e-23
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                         
Query: 171   acctagtgcagtctcgtcagctcctccacccgcttggacagctcctcgacagggaccgcc 230
             |||||||||| ||| |||||||||||||||| |||||| |||||||| || |||||| ||
Sbjct: 77982 acctagtgcaatctagtcagctcctccaccctcttggatagctcctcaacggggaccccc 77923

                                                                         
Query: 231   atcgccttggccacctcctccatcttggacctgttgaggtcgaggaatgactcaatcagg 290
             ||  |||||||||||||||||||||||   ||| | || || ||||||||||| ||||||
Sbjct: 77922 atacccttggccacctcctccatcttgtttctgcttagatcaaggaatgactcgatcagg 77863

                           
Query: 291   tcgccgtccaggaa 304
             || || ||||||||
Sbjct: 77862 tcaccatccaggaa 77849

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  115 bits (58), Expect = 8e-23
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                            
Query: 171      acctagtgcagtctcgtcagctcctccacccgcttggacagctcctcgacagggaccgcc 230
                |||||||||| ||| |||||||||||||||| |||||| |||||||| || |||||| ||
Sbjct: 29299325 acctagtgcaatctagtcagctcctccaccctcttggatagctcctcaacggggaccccc 29299266

                                                                            
Query: 231      atcgccttggccacctcctccatcttggacctgttgaggtcgaggaatgactcaatcagg 290
                ||  |||||||||||||||||||||||   ||| | || || ||||||||||| ||||||
Sbjct: 29299265 atacccttggccacctcctccatcttgtttctgcttagatcaaggaatgactcgatcagg 29299206

                              
Query: 291      tcgccgtccaggaa 304
                || || ||||||||
Sbjct: 29299205 tcaccatccaggaa 29299192

>dbj|AK104782.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C09, full
           insert sequence
          Length = 1135

 Score =  115 bits (58), Expect = 8e-23
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                       
Query: 171 acctagtgcagtctcgtcagctcctccacccgcttggacagctcctcgacagggaccgcc 230
           |||||||||| ||| |||||||||||||||| |||||| |||||||| || |||||| ||
Sbjct: 734 acctagtgcaatctagtcagctcctccaccctcttggatagctcctcaacggggaccccc 675

                                                                       
Query: 231 atcgccttggccacctcctccatcttggacctgttgaggtcgaggaatgactcaatcagg 290
           ||  |||||||||||||||||||||||   ||| | || || ||||||||||| ||||||
Sbjct: 674 atacccttggccacctcctccatcttgtttctgcttagatcaaggaatgactcgatcagg 615

                         
Query: 291 tcgccgtccaggaa 304
           || || ||||||||
Sbjct: 614 tcaccatccaggaa 601

>dbj|AK065508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026I01, full
            insert sequence
          Length = 3792

 Score =  115 bits (58), Expect = 8e-23
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                        
Query: 171  acctagtgcagtctcgtcagctcctccacccgcttggacagctcctcgacagggaccgcc 230
            |||||||||| ||| |||||||||||||||| |||||| |||||||| || |||||| ||
Sbjct: 3391 acctagtgcaatctagtcagctcctccaccctcttggatagctcctcaacggggaccccc 3332

                                                                        
Query: 231  atcgccttggccacctcctccatcttggacctgttgaggtcgaggaatgactcaatcagg 290
            ||  |||||||||||||||||||||||   ||| | || || ||||||||||| ||||||
Sbjct: 3331 atacccttggccacctcctccatcttgtttctgcttagatcaaggaatgactcgatcagg 3272

                          
Query: 291  tcgccgtccaggaa 304
            || || ||||||||
Sbjct: 3271 tcaccatccaggaa 3258

>dbj|AK059736.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D04, full
           insert sequence
          Length = 1135

 Score =  115 bits (58), Expect = 8e-23
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                       
Query: 171 acctagtgcagtctcgtcagctcctccacccgcttggacagctcctcgacagggaccgcc 230
           |||||||||| ||| |||||||||||||||| |||||| |||||||| || |||||| ||
Sbjct: 734 acctagtgcaatctagtcagctcctccaccctcttggatagctcctcaacggggaccccc 675

                                                                       
Query: 231 atcgccttggccacctcctccatcttggacctgttgaggtcgaggaatgactcaatcagg 290
           ||  |||||||||||||||||||||||   ||| | || || ||||||||||| ||||||
Sbjct: 674 atacccttggccacctcctccatcttgtttctgcttagatcaaggaatgactcgatcagg 615

                         
Query: 291 tcgccgtccaggaa 304
           || || ||||||||
Sbjct: 614 tcaccatccaggaa 601

>dbj|AB037144.1| Oryza sativa (japonica cultivar-group) OsUV-DDB mRNA for UV-damaged
            DNA binding protein, complete cds
          Length = 3658

 Score =  115 bits (58), Expect = 8e-23
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                        
Query: 171  acctagtgcagtctcgtcagctcctccacccgcttggacagctcctcgacagggaccgcc 230
            |||||||||| ||| |||||||||||||||| |||||| |||||||| || |||||| ||
Sbjct: 3391 acctagtgcaatctagtcagctcctccaccctcttggatagctcctcaacggggaccccc 3332

                                                                        
Query: 231  atcgccttggccacctcctccatcttggacctgttgaggtcgaggaatgactcaatcagg 290
            ||  |||||||||||||||||||||||   ||| | || || ||||||||||| ||||||
Sbjct: 3331 atacccttggccacctcctccatcttgtttctgcttagatcaaggaatgactcgatcagg 3272

                          
Query: 291  tcgccgtccaggaa 304
            || || ||||||||
Sbjct: 3271 tcaccatccaggaa 3258

>gb|BT024148.1| Zea mays clone EL01N0440D08 mRNA sequence
          Length = 1582

 Score =  113 bits (57), Expect = 3e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                       
Query: 183 ctcgtcagctcctccacccgcttggacagctcctcgacagggaccgccatcgccttggcc 242
           ||||||||||| ||||||| ||||||||||||||| || |||||  |||||||||||| |
Sbjct: 246 ctcgtcagctcttccaccctcttggacagctcctccacggggacgcccatcgccttggac 305

                                                                       
Query: 243 acctcctccatcttggacctgttgaggtcgaggaatgactcaatcaggtcgccgtccagg 302
           |||||||||||||||  || | | ||||| ||||| ||||| |||||||| ||||| |||
Sbjct: 306 acctcctccatcttgctccggctaaggtcaaggaaagactcgatcaggtcaccgtcgagg 365

                
Query: 303 aagtt 307
           |||||
Sbjct: 366 aagtt 370

>ref|XM_476019.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3273

 Score =  111 bits (56), Expect = 1e-21
 Identities = 113/132 (85%)
 Strand = Plus / Minus

                                                                        
Query: 173  ctagtgcagtctcgtcagctcctccacccgcttggacagctcctcgacagggaccgccat 232
            |||||||| ||| |||||||||||||||| |||||| |||||||| || |||||| ||||
Sbjct: 3273 ctagtgcaatctagtcagctcctccaccctcttggatagctcctcaacggggacccccat 3214

                                                                        
Query: 233  cgccttggccacctcctccatcttggacctgttgaggtcgaggaatgactcaatcaggtc 292
              |||||||||||||||||||||||   ||| | || || ||||||||||| ||||||||
Sbjct: 3213 acccttggccacctcctccatcttgtttctgcttagatcaaggaatgactcgatcaggtc 3154

                        
Query: 293  gccgtccaggaa 304
             || ||||||||
Sbjct: 3153 accatccaggaa 3142

>gb|AY104362.1| Zea mays PCO060159 mRNA sequence
          Length = 1296

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 108/135 (80%)
 Strand = Plus / Minus

                                                                       
Query: 173 ctagtgcagtctcgtcagctcctccacccgcttggacagctcctcgacagggaccgccat 232
           |||||| || ||||||||||| |||||   ||||||||| ||||| || |  ||  ||||
Sbjct: 860 ctagtgaagcctcgtcagctcttccacaatcttggacagatcctccaccgaaacgcccat 801

                                                                       
Query: 233 cgccttggccacctcctccatcttggacctgttgaggtcgaggaatgactcaatcaggtc 292
            ||||||| |||| |||||||||||  || | | ||||| ||||| ||||| ||||||||
Sbjct: 800 agccttggacaccacctccatcttgctccggctaaggtcaaggaacgactcgatcaggtc 741

                          
Query: 293 gccgtccaggaagtt 307
            || || ||||||||
Sbjct: 740 accatcaaggaagtt 726

>ref|XM_785030.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC585193 (LOC585193), mRNA
          Length = 1668

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 233 cgccttggccacctcctccat 253
           |||||||||||||||||||||
Sbjct: 264 cgccttggccacctcctccat 244

>ref|XM_482858.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1599

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  cttggacagctcctcgacag 222
            ||||||||||||||||||||
Sbjct: 1413 cttggacagctcctcgacag 1394

>ref|NM_021099.2| Mus musculus kit oncogene (Kit), mRNA
          Length = 5132

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  cgccatcgccttggccacct 246
            ||||||||||||||||||||
Sbjct: 2365 cgccatcgccttggccacct 2346

>ref|XM_956852.1| Neurospora crassa OR74A hypothetical protein (NCU06585.1) partial
            mRNA
          Length = 3123

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  ccttggccacctcctccatc 254
            ||||||||||||||||||||
Sbjct: 2548 ccttggccacctcctccatc 2529

>ref|XM_326439.1| Neurospora crassa OR74A hypothetical protein (NCU06585.1) partial
            mRNA
          Length = 3123

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  ccttggccacctcctccatc 254
            ||||||||||||||||||||
Sbjct: 2548 ccttggccacctcctccatc 2529

>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 230     catcgccttggccacctcctccat 253
               |||||||||||||||||| |||||
Sbjct: 2717222 catcgccttggccacctcttccat 2717245

>ref|XM_547518.2| PREDICTED: Canis familiaris similar to Apoptosis stimulating of p53
            protein 2 (Tumor suppressor p53-binding protein 2)
            (p53-binding protein 2) (53BP2) (Bcl2-binding protein)
            (Bbp) (LOC490397), mRNA
          Length = 3792

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  gtctcgtcagctcctccacc 200
            ||||||||||||||||||||
Sbjct: 1102 gtctcgtcagctcctccacc 1083

>gb|AC099575.10| Mus musculus chromosome 14, clone RP23-83E2, complete sequence
          Length = 138102

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   ctcctccatcttggacctgt 264
             ||||||||||||||||||||
Sbjct: 32235 ctcctccatcttggacctgt 32254

>gb|AC110157.7| Mus musculus chromosome 14, clone RP23-151K23, complete sequence
          Length = 243114

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    ctcctccatcttggacctgt 264
              ||||||||||||||||||||
Sbjct: 203840 ctcctccatcttggacctgt 203859

>emb|X65998.1|MMCKITPRO M.musculus genomic DNA of c-kit promoter region
          Length = 1161

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 cgccatcgccttggccacct 246
           ||||||||||||||||||||
Sbjct: 30  cgccatcgccttggccacct 11

>gb|AC129091.19| Medicago truncatula clone mth2-15j7, complete sequence
          Length = 106540

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aaagttacactcttatcaaa 49
             ||||||||||||||||||||
Sbjct: 92380 aaagttacactcttatcaaa 92361

>emb|AL353573.10| Human DNA sequence from clone RP11-550E18 on chromosome 9 Contains a
             solute carrier family 25 (mitochondrial carrier; adenine
             nucleotide translocator), member 5 (SLC25A5) (ANT2)
             pseudogene, complete sequence
          Length = 166664

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 117   tttacaacacagcgaaaacgaacaaata 144
             |||||| ||||| |||||||||||||||
Sbjct: 20150 tttacagcacagtgaaaacgaacaaata 20177

>emb|Y00864.1|MMCKIT Mouse c-kit mRNA
          Length = 5098

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  cgccatcgccttggccacct 246
            ||||||||||||||||||||
Sbjct: 2365 cgccatcgccttggccacct 2346

>gb|AF356350.1|AF356350 Mus musculus c-KIT gene, promoter region and partial cds
          Length = 1210

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 cgccatcgccttggccacct 246
           ||||||||||||||||||||
Sbjct: 75  cgccatcgccttggccacct 56

>gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-31g23, complete
             sequence
          Length = 113812

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aaagttacactcttatcaaa 49
             ||||||||||||||||||||
Sbjct: 94991 aaagttacactcttatcaaa 95010

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 203      cttggacagctcctcgacag 222
                ||||||||||||||||||||
Sbjct: 22995444 cttggacagctcctcgacag 22995425

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    cgccttggccacctcctcca 252
              ||||||||||||||||||||
Sbjct: 290449 cgccttggccacctcctcca 290468

>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0104B02
          Length = 169588

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    cttggacagctcctcgacag 222
              ||||||||||||||||||||
Sbjct: 169282 cttggacagctcctcgacag 169263

>emb|AL731729.10| Mouse DNA sequence from clone RP23-92L12 on chromosome X, complete
             sequence
          Length = 216656

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    acagataaagttacactctt 43
             ||||||||||||||||||||
Sbjct: 39645 acagataaagttacactctt 39626

>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   cttggacagctcctcgacag 222
             ||||||||||||||||||||
Sbjct: 55172 cttggacagctcctcgacag 55153

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     ccgccatcgccttggccacc 245
               ||||||||||||||||||||
Sbjct: 1957900 ccgccatcgccttggccacc 1957919

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 233     cgccttggccacctcctcca 252
               ||||||||||||||||||||
Sbjct: 1595005 cgccttggccacctcctcca 1594986

>dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0355, complete sequence
          Length = 124602

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     tcttatcaaagtcgaaaaca 59
              ||||||||||||||||||||
Sbjct: 118575 tcttatcaaagtcgaaaaca 118594


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,620,408
Number of Sequences: 3902068
Number of extensions: 2620408
Number of successful extensions: 48627
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 48380
Number of HSP's gapped (non-prelim): 240
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)