Clone Name | rbastl02g07 |
---|---|
Clone Library Name | barley_pub |
>MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription activator| Alpha1p) (MATalpha1 protein) Length = 261 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +2 Query: 257 LQTIINTHVTSQKYTAQNWLLLTSQFLCGETPK 355 L TII+ H T K T +NW L+ ++ C + K Sbjct: 129 LSTIISKHWTVDKQTRKNWELIAQEYNCDASGK 161
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/66 (31%), Positives = 33/66 (50%) Frame = +1 Query: 121 NNNIGGDTKTSHLTEEEKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIY 300 +++ T +S + +E S GSS S AA+ PK++A + P N+ SC A Sbjct: 245 SSSTSSSTSSSTSSTQETAATTS-EGSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAV 301 Query: 301 SSKLAV 318 SS L + Sbjct: 302 SSDLTL 307
>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3| Length = 1396 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 Query: 111 FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 19 ++ NL C LEY GY ++ H RKLN Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349
>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -1 Query: 319 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRQRRPNSCWSLGMNKAFFFL 167 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -1 Query: 319 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRQRRPNSCWSLGMNKAFFFL 167 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)| Length = 505 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -1 Query: 319 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRQRRPNSCWSLGMNKAFFFL 167 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1| Length = 1076 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = +1 Query: 145 KTSHL-------TEEEKKKPCSF-PGSSKS*AAVAERPKSMASSFPPNNNQHS 279 K SH+ T+E KK F PGSS+S + S+ S +PP +HS Sbjct: 433 KASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHS 485
>SSPN_MOUSE (Q62147) Sarcospan (K-ras oncogene-associated protein)| (Kirsten-Ras-associated protein) Length = 216 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = -1 Query: 238 ILVSRQRRPNSCWSLGMNKAFFFLLLSNGMFLCLLQ---CYYFFSVLTQF 98 + VS Q +C M K F+FLL + G+ +C+L + +S+L QF Sbjct: 78 LCVSYQVDERTCVQFSM-KVFYFLLSALGLMVCMLAVAFAAHHYSLLAQF 126
>AFAD_HUMAN (P55196) Afadin (AF-6 protein)| Length = 1816 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +2 Query: 182 LVHSQAPARVRPPLPRDQNP 241 L+ +AP RPPLPRD P Sbjct: 1658 LLEPEAPGLCRPPLPRDYEP 1677
>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 438 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 5 QNNLRFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 112 +NNL F+FR + H + +E K + HC K+C N Sbjct: 36 KNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69
>YR187_MIMIV (Q5URB3) Hypothetical protein R187| Length = 246 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/54 (27%), Positives = 25/54 (46%) Frame = +3 Query: 219 RCRETKIHGFFLSSKQ*STLM*PRKNIQLKTGCCSHPSSSAVKHLSYREYTIRC 380 +C +HG ++ S L+ +N+ T C P K+++YR YT C Sbjct: 96 KCLSYPVHGMYIGSDCIIYLI---ENVDPSTNCTKFPDEIFAKYVTYR-YTQNC 145
>YMZ2_YEAST (Q03177) Hypothetical 94.3 kDa Trp-Asp repeats-containing protein| in SNZ1-YPK2 intergenic region Length = 834 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/75 (29%), Positives = 37/75 (49%) Frame = +1 Query: 163 EEEKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKLAVAHIPVPLR 342 +E K+KP G ++S + + KSM+ S NN + + K+ + +P+P Sbjct: 514 DEPKRKP---KGLARSGSLRSIFSKSMSRSSSQNNEEKPHHHLKLTNL------LPLPHH 564 Query: 343 *NT*AIENTPYAAFH 387 N I+NT Y +FH Sbjct: 565 SNDHYIKNTDYISFH 579
>RBL2_MAGMG (Q8RTI2) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)| Length = 459 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = -3 Query: 233 GLSATAA*LLLEPGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTICNNVLWFWSIL 66 G + A+ L L GN QG + K + F PP L LF N+ W +L Sbjct: 97 GKAMIASFLTLTVGNNQGMSDVENAKMEDFYVPPEFLKLFDGPAC--NISHMWKVL 150
>OR7D4_HUMAN (Q8NG98) Olfactory receptor 7D4 (Olfactory receptor OR19-7)| Length = 312 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = -1 Query: 295 FLRGYMSVDYCLEERKKPWILVSRQRRPNSCWSLGMNKAFFFLLLSNGM--FLCLLQCY 125 FL VD C P +LVS Q R +G +FL++ GM FL + Y Sbjct: 62 FLSNLSFVDICFISTTVPKMLVSIQARSKDISYMGCLTQVYFLMMFAGMDTFLLAVMAY 120
>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III| Length = 577 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 197 PGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTI 99 P + G + S W F PPM+ ++FSS+ I Sbjct: 246 PNEDHGISYLS---WMAFAIPPMIFYMFSSWFI 275
>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2| (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2) Length = 551 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -3 Query: 161 VKWDVFVSPPMLLFLFSSYTI 99 ++W VF PPM ++L +SY I Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261
>MLZE_HUMAN (Q9BYG8) Melanoma-derived leucine zipper-containing extranuclear| factor Length = 508 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = +2 Query: 245 LLPFLQTIINT--HVTSQKYTAQNWLLLTSQFLCGETPKL*RIH 370 LLP TI T + +S + L LT QFL G PK ++H Sbjct: 258 LLPSFHTISPTLFNASSNDMKLKPELFLTQQFLSGHLPKYEQVH 301 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,269,810 Number of Sequences: 219361 Number of extensions: 1244865 Number of successful extensions: 3589 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3524 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3589 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)