Clone Name | rbastl02g05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC159882.2| Mus musculus BAC clone RP24-480A4 from chromosome 9, complete sequence Length = 178827 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 attatcaacatgcagtaaac 68 |||||||||||||||||||| Sbjct: 64434 attatcaacatgcagtaaac 64415
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 taataagcattatcaacat 59 ||||||||||||||||||| Sbjct: 4992748 taataagcattatcaacat 4992730
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 taataagcattatcaacat 59 ||||||||||||||||||| Sbjct: 4986259 taataagcattatcaacat 4986241
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 taataagcattatcaacat 59 ||||||||||||||||||| Sbjct: 4987470 taataagcattatcaacat 4987452
>ref|XM_454932.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E21780g predicted mRNA Length = 3051 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 ttaataagcattatcaaca 58 ||||||||||||||||||| Sbjct: 1310 ttaataagcattatcaaca 1328
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 taataagcattatcaacat 59 ||||||||||||||||||| Sbjct: 5047987 taataagcattatcaacat 5047969
>gb|AC164158.3| Mus musculus BAC clone RP24-263G24 from chromosome 7, complete sequence Length = 200983 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 agtaattttccatcttaca 31 ||||||||||||||||||| Sbjct: 153870 agtaattttccatcttaca 153852
>emb|AL445923.10| Human DNA sequence from clone RP11-117N4 on chromosome 13 Contains a ribosomal protein S10 (RPS10) pseudogene, complete sequence Length = 154726 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 cagtaaactaaacaacaac 79 ||||||||||||||||||| Sbjct: 130056 cagtaaactaaacaacaac 130074
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 ttaataagcattatcaaca 58 ||||||||||||||||||| Sbjct: 1938179 ttaataagcattatcaaca 1938161
>emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, complete sequence Length = 219044 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 aattaataagcattatcaa 56 ||||||||||||||||||| Sbjct: 202149 aattaataagcattatcaa 202167
>gb|AC134587.3| Mus musculus BAC clone RP23-306P12 from chromosome 7, complete sequence Length = 166576 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 agtaattttccatcttaca 31 ||||||||||||||||||| Sbjct: 147909 agtaattttccatcttaca 147927
>emb|BX649532.7| Zebrafish DNA sequence from clone CH211-260H3 in linkage group 20, complete sequence Length = 159939 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 aattaataagcattatcaa 56 ||||||||||||||||||| Sbjct: 47866 aattaataagcattatcaa 47848
>gb|AF093649.1|AF093649 Linum usitatissimum flax rust resistance protein (L) gene, LH allele, complete cds Length = 6166 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 aaacaacaacgatcgaaac 88 ||||||||||||||||||| Sbjct: 2634 aaacaacaacgatcgaaac 2616
>gb|AF093647.1|AF093647 Linum usitatissimum flax rust resistance protein (L) gene, L8 allele, complete cds Length = 3342 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 aaacaacaacgatcgaaac 88 ||||||||||||||||||| Sbjct: 1341 aaacaacaacgatcgaaac 1323
>gb|AF093645.1|AF093645 Linum usitatissimum flax rust resistance protein (L) gene, L5 allele, complete cds Length = 4651 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 aaacaacaacgatcgaaac 88 ||||||||||||||||||| Sbjct: 1341 aaacaacaacgatcgaaac 1323
>gb|AF093644.1|AF093644 Linum usitatissimum flax rust resistance protein (L) gene, L4 allele, complete cds Length = 4637 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 aaacaacaacgatcgaaac 88 ||||||||||||||||||| Sbjct: 1341 aaacaacaacgatcgaaac 1323
>gb|AF093643.1|AF093643 Linum usitatissimum flax rust resistance protein (L) gene, L3 allele, complete cds Length = 4637 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 aaacaacaacgatcgaaac 88 ||||||||||||||||||| Sbjct: 1341 aaacaacaacgatcgaaac 1323
>gb|AF093642.1|AF093642 Linum usitatissimum flax rust resistance protein (L) gene, L2 allele, complete cds Length = 5479 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 aaacaacaacgatcgaaac 88 ||||||||||||||||||| Sbjct: 1341 aaacaacaacgatcgaaac 1323
>gb|AF093640.1|AF093640 Linum usitatissimum flax rust resistance protein (L) gene, L10 allele, complete cds Length = 4637 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 aaacaacaacgatcgaaac 88 ||||||||||||||||||| Sbjct: 1341 aaacaacaacgatcgaaac 1323
>gb|AF093639.1|AF093639 Linum usitatissimum flax rust resistance protein (L) gene, L1 allele, complete cds Length = 3680 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 aaacaacaacgatcgaaac 88 ||||||||||||||||||| Sbjct: 1341 aaacaacaacgatcgaaac 1323
>gb|AF093638.1|AF093638 Linum usitatissimum flax rust resistance protein (L) gene, L allele, complete cds Length = 4627 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 aaacaacaacgatcgaaac 88 ||||||||||||||||||| Sbjct: 1338 aaacaacaacgatcgaaac 1320
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 taataagcattatcaacat 59 ||||||||||||||||||| Sbjct: 4986133 taataagcattatcaacat 4986115 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 996,860 Number of Sequences: 3902068 Number of extensions: 996860 Number of successful extensions: 65673 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65534 Number of HSP's gapped (non-prelim): 139 length of query: 143 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 122 effective length of database: 17,151,101,840 effective search space: 2092434424480 effective search space used: 2092434424480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)