Clone Name | rbastl02g04 |
---|---|
Clone Library Name | barley_pub |
>PLSX_PROMM (Q7V4F7) Fatty acid/phospholipid synthesis protein plsX| Length = 448 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/54 (31%), Positives = 32/54 (59%) Frame = +3 Query: 141 KPQS*HRKHVWKRKSAQV*HLSW*ACNSCSYSGNVSAILSIRSSGKICAWRGAV 302 +P++ R +W R++A V L A NS S +GNV+ + + S+G + + G++ Sbjct: 20 RPRAIRRLVIWYRRNAAVTSLVGSATNSASAAGNVAGTV-VSSAGSVVSNAGSM 72
>VG12_SHV21 (P24915) Hypothetical gene 12 protein| Length = 169 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -2 Query: 129 ILFVVCFRYSACSLCSCMK*WTTMYYWDSPLLVDEKYHSFY 7 I+ VC C LC + T+ W S +L E Y++FY Sbjct: 76 IVLCVCVSTLLCILCILLDICLTIRLWQSSVLCYEVYNTFY 116
>OTC_BUCBP (Q89AG1) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)| Length = 339 Score = 29.3 bits (64), Expect = 4.4 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +1 Query: 1 HAIKRMILFIHQKWGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDN 138 + + +L + Q I V+HC PSFH + T + NK N DN Sbjct: 254 YQVNLKMLLLTQNKKIKVLHCLPSFHDK--NTIVGEEIINKHNLDN 297
>KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein RBKIN)| Length = 1805 Score = 28.5 bits (62), Expect = 7.6 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +2 Query: 77 IHEHKEQAEYLKQTTNKIEIMKAPKLT*KTCLEKKICTSLT 199 I E +E+ E L++ ++ E MKAP+L K +K+ LT Sbjct: 367 IRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELT 407
>NIN_HUMAN (Q8N4C6) Ninein (hNinein)| Length = 2090 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +2 Query: 65 VHHFIHEHKEQAEYLKQTTNKIEIMKAPKL 154 VHH I E K++ +YL+ T +E +KA ++ Sbjct: 1380 VHHVIEECKQENQYLEGNTQLLEKVKAHEI 1409
>MYX2_CROVC (P12029) Myotoxin-2 (Myotoxin II)| Length = 43 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -3 Query: 338 HKTSGSFIDSEIYCTPPSADFAR 270 HK G E CTPPS+DF + Sbjct: 5 HKKGGHCFPKEKICTPPSSDFGK 27
>TIG_MYCTU (O53189) Trigger factor (TF)| Length = 466 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -1 Query: 370 DIELGSLDEMDIKQVVLSLIQKYTAPLQAQILPDDLIERIAETFPEY 230 D E + E D+K+ +L + LQ Q+ DDL ER+ T +Y Sbjct: 340 DAEARTASEKDVKRQLL--LDALADELQVQVGQDDLTERLVTTSRQY 384
>TIG_MYCBO (Q7TYJ1) Trigger factor (TF)| Length = 466 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -1 Query: 370 DIELGSLDEMDIKQVVLSLIQKYTAPLQAQILPDDLIERIAETFPEY 230 D E + E D+K+ +L + LQ Q+ DDL ER+ T +Y Sbjct: 340 DAEARTASEKDVKRQLL--LDALADELQVQVGQDDLTERLVTTSRQY 384
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%) Frame = -1 Query: 352 LDEMDIKQVVLSLIQKYTAPLQAQILPD----DLIERIAETFPEYEQ 224 +++ D+K V + ++K TA LQA D D +ERI E F +++ Sbjct: 18 IEKDDLKDVAAAKVKKITAELQAASSSDSKSFDPVERIKEGFVTFKK 64
>YG4U_YEAST (P53308) Hypothetical 11.9 kDa protein in DIE2-SMI1 intergenic| region Length = 114 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = -2 Query: 240 FLNMSSCCMLTNLG--VRLVQIFFSKHVFYVSFGAFIISILFVVCFRYSACSLCSC 79 FL +SS C+ T+ V FS F +FG F S L + C + +L SC Sbjct: 32 FLFISSVCLFTSSSFFADSVTCSFSTCSFSSTFGCFSSSFLSLSCLMSTLSALISC 87
>TDRD7_HUMAN (Q8NHU6) Tudor domain-containing protein 7 (Tudor repeat associator| with PCTAIRE 2) (Trap) Length = 1098 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -1 Query: 340 DIKQVVLSLIQKYTAPLQAQILPDDLIERIAETFPE 233 D K+ V L+ KYT+ L A LP E FPE Sbjct: 340 DFKEKVADLLVKYTSGLWASALPKAFEEMYKVKFPE 375
>YWV1_CAEEL (Q11075) Hypothetical protein B0403.1| Length = 198 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 177 FSKHVFYVSFGAFIISILFVVCFRYSACSL 88 F KH+ YVS AF+ + CFR++ SL Sbjct: 23 FQKHIEYVSNSAFLKCRQLLRCFRFTNVSL 52
>RNH2_PROMA (Q7VA11) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 191 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -1 Query: 298 APLQAQILPDDLIERIAETFPEY 230 A + A++ DDLI+R+AE +P+Y Sbjct: 134 ASVLAKVARDDLIKRMAEKYPQY 156
>PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX| Length = 436 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/54 (29%), Positives = 32/54 (59%) Frame = +3 Query: 141 KPQS*HRKHVWKRKSAQV*HLSW*ACNSCSYSGNVSAILSIRSSGKICAWRGAV 302 +P++ R +W R+++ V L A NS S +GNV+ + + S+G + + G++ Sbjct: 11 RPKAIRRLVIWYRRNSAVTTLVDTATNSASAAGNVAGSV-VSSAGSVVSSAGSI 63
>NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)| (NFATc3) (T cell transcription factor NFAT4) (NF-AT4) (NFATx) Length = 1075 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +1 Query: 220 TAAHIQEMFLQFSQLGHLAKSALGGVQYISE--SMKEPLVLCPFHPGN 357 T H+Q M S G A S+ Q + S +P+ CP HPG+ Sbjct: 874 TPPHLQSMGYHCSNAGQTALSSPVADQITGQPSSHLQPITYCPSHPGS 921 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,627,793 Number of Sequences: 219361 Number of extensions: 1002209 Number of successful extensions: 3094 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 3012 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3093 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)