ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl02g01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 258 bits (130), Expect = 1e-65 Identities = 172/186 (92%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || |||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 3655832 ctacttctcggaggagttgggcccgcgcttcttgccgaatccgacgacggcggtgacgaa 3655773 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||||||||||||| || | |||||||||||||||||| |||| ||||||||||||||| Sbjct: 3655772 gcggcggttgtactgcatcctcttgtgggcgcggccgcggggcttcttcttcttgtcctg 3655713 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 |||||||||||||||||||||||| |||||||||||||| || || |||||||||||||| Sbjct: 3655712 cttcgccaccttgggcgtctggccgcgcaccttcccggcgcgagcgagcgatccgtgcac 3655653 Query: 338 cttacc 343 |||||| Sbjct: 3655652 cttacc 3655647
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 258 bits (130), Expect = 1e-65 Identities = 172/186 (92%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || |||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 50060 ctacttctcggaggagttgggcccgcgcttcttgccgaatccgacgacggcggtgacgaa 50001 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||||||||||||| || | |||||||||||||||||| |||| ||||||||||||||| Sbjct: 50000 gcggcggttgtactgcatcctcttgtgggcgcggccgcggggcttcttcttcttgtcctg 49941 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 |||||||||||||||||||||||| |||||||||||||| || || |||||||||||||| Sbjct: 49940 cttcgccaccttgggcgtctggccgcgcaccttcccggcgcgagcgagcgatccgtgcac 49881 Query: 338 cttacc 343 |||||| Sbjct: 49880 cttacc 49875
>dbj|AK060583.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H06, full insert sequence Length = 1094 Score = 258 bits (130), Expect = 1e-65 Identities = 175/190 (92%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || |||||||| || |||||||||||||| |||||| ||||||||||||| Sbjct: 832 ctacttctcggaggagttgggcccgcgcttcttgccgaatccgacggcggcggtgacgaa 773 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||||||||||||| || | |||||||||||||||||| |||| ||||||||||||||| Sbjct: 772 gcggcggttgtactgcatcctcttgtgggcgcggccgcggggcttcttcttcttgtcctg 713 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 |||||||||||||||||||||||| |||||||||||||| || || |||||||||||||| Sbjct: 712 cttcgccaccttgggcgtctggccgcgcaccttcccggcgcgagcgagcgatccgtgcac 653 Query: 338 cttacccatg 347 |||||||||| Sbjct: 652 cttacccatg 643
>gb|AY106443.1| Zea mays PCO068394 mRNA sequence Length = 667 Score = 254 bits (128), Expect = 2e-64 Identities = 176/192 (91%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 243 ctacttctcggaggagttgggcccgcgcttcttgccgaagccgacgacggcggtgacgaa 184 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||||||||||||| || | |||||| ||||||||||| |||| ||||||||||||||| Sbjct: 183 gcggcggttgtactgcatcctcttgtgcgcgcggccgcggggcttcttcttcttgtcctg 124 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||||||||||||||| ||||| || || ||||||||||| ||||||| |||||||||||| Sbjct: 123 cttcgccaccttgggggtctgcccgcggaccttcccggcgcgcgccaacgatccgtgcac 64 Query: 338 cttacccatggc 349 |||||||||||| Sbjct: 63 cttacccatggc 52
>gb|BT017988.1| Zea mays clone EL01N0526A01.c mRNA sequence Length = 556 Score = 246 bits (124), Expect = 5e-62 Identities = 175/192 (91%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || |||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 243 ctacttctcggaggagttgggcccgcgcttcttgccgaaaccgacgacggcggtgacgaa 184 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||||||||||||| || | |||||| ||||||||||| |||| ||||||||||||||| Sbjct: 183 gcggcggttgtactgcatcctcttgtgcgcgcggccgcggggcttcttcttcttgtcctg 124 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||||||||||||||| ||||| || || ||||||||||| ||||||| |||||||||||| Sbjct: 123 cttcgccaccttgggggtctgcccgcggaccttcccggcgcgcgccaacgatccgtgcac 64 Query: 338 cttacccatggc 349 |||||||||||| Sbjct: 63 cttacccatggc 52
>gb|AY108153.1| Zea mays PCO068393 mRNA sequence Length = 570 Score = 242 bits (122), Expect = 8e-61 Identities = 170/186 (91%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 |||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 375 ctacttctccgaggagttggggccgcgtttcttgccgaatccgacgacggcggtgacgaa 316 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 315 gcggcggttgtactgcatgcgcttgtacgcgcggccgcggggcttcttcttcttgtcctg 256 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||||||||||||||||||||| || ||||||||||| || || || ||||||||||| || Sbjct: 255 cttcgccaccttgggcgtctgcccacgcaccttccccgcgcgggcaagcgatccgtgaac 196 Query: 338 cttacc 343 |||||| Sbjct: 195 cttacc 190
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 226 bits (114), Expect = 5e-56 Identities = 168/186 (90%) Strand = Plus / Plus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 34314578 ctacttctcggaggagtttggcccgcgcttcttgccgaagccgacgacggcggtgacgaa 34314637 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 |||||||||||||| || ||||||||||||||||| || |||| ||||||||||||||| Sbjct: 34314638 acggcggttgtactgcatccgcttgtgggcgcggccccggggcttcttcttcttgtcctg 34314697 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 |||||||||||| |||||||| |||| |||||||||||| || |||||||| ||||| || Sbjct: 34314698 cttcgccaccttcggcgtctgccccctcaccttcccggcgcgagccagcgagccgtgaac 34314757 Query: 338 cttacc 343 |||||| Sbjct: 34314758 cttacc 34314763
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 226 bits (114), Expect = 5e-56 Identities = 168/186 (90%) Strand = Plus / Plus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 12225 ctacttctcggaggagtttggcccgcgcttcttgccgaagccgacgacggcggtgacgaa 12284 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 |||||||||||||| || ||||||||||||||||| || |||| ||||||||||||||| Sbjct: 12285 acggcggttgtactgcatccgcttgtgggcgcggccccggggcttcttcttcttgtcctg 12344 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 |||||||||||| |||||||| |||| |||||||||||| || |||||||| ||||| || Sbjct: 12345 cttcgccaccttcggcgtctgccccctcaccttcccggcgcgagccagcgagccgtgaac 12404 Query: 338 cttacc 343 |||||| Sbjct: 12405 cttacc 12410
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 226 bits (114), Expect = 5e-56 Identities = 168/186 (90%) Strand = Plus / Plus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 149851 ctacttctcggaggagtttggcccgcgcttcttgccgaagccgacgacggcggtgacgaa 149910 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 |||||||||||||| || ||||||||||||||||| || |||| ||||||||||||||| Sbjct: 149911 acggcggttgtactgcatccgcttgtgggcgcggccccggggcttcttcttcttgtcctg 149970 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 |||||||||||| |||||||| |||| |||||||||||| || |||||||| ||||| || Sbjct: 149971 cttcgccaccttcggcgtctgccccctcaccttcccggcgcgagccagcgagccgtgaac 150030 Query: 338 cttacc 343 |||||| Sbjct: 150031 cttacc 150036
>dbj|AP006400.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT22I23, TM0281b, complete sequence Length = 48187 Score = 149 bits (75), Expect = 9e-33 Identities = 123/139 (88%) Strand = Plus / Plus Query: 205 cggcggtgacgaagcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgct 264 ||||||||||||| ||||||||||| || ||||||||||| ||||||||||| |||| || Sbjct: 39644 cggcggtgacgaatcggcggttgtattgcatgcgcttgtgagcgcggccgcggggcttct 39703 Query: 265 tcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgcca 324 |||||||||||||||| ||||||||||| || ||||| | ||||||||| ||||| || | Sbjct: 39704 tcttcttgtcctgcttggccaccttgggagtttggcctctcaccttcccagcacgagcaa 39763 Query: 325 gcgatccgtgcaccttacc 343 | |||||||| |||||||| Sbjct: 39764 gagatccgtgaaccttacc 39782
>gb|AY109694.1| Zea mays CL7222_2 mRNA sequence Length = 609 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 |||||||||||| ||||||||||| |||||||||||||| || || |||||||||||||| Sbjct: 275 ctacttctccgatgagttggggccgcgcttcttgccgaatccaacaacggcggtgacgaa 334 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgc 255 |||||||||||| || ||||||||||| |||||||||| Sbjct: 335 gcggcggttgtattgcatgcgcttgtgagcgcggccgc 372 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 285 accttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcaccttaccc 344 |||||||||||||| || ||||||||||| || || |||||||||||||| ||||||||| Sbjct: 402 accttgggcgtctgcccgcgcaccttcccagcgcgggccagcgatccgtgaaccttaccc 461 Query: 345 atggc 349 ||||| Sbjct: 462 atggc 466
>ref|NM_127533.1| Arabidopsis thaliana structural constituent of ribosome AT2G19750 mRNA, complete cds Length = 189 Score = 81.8 bits (41), Expect = 2e-12 Identities = 152/189 (80%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || ||||| || || | ||||||||| || || || |||||||||||||| Sbjct: 189 ctacttctctgatgagtttggtcctctcttcttgccaaaaccaacaacggcggtgacgaa 130 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 |||||||||| || | ||||| || || || || || |||| ||||||||||||||| Sbjct: 129 acggcggttgtgttgcagacgcttatgagcacgaccacgaggcttcttcttcttgtcctg 70 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 69 cttagccactttaggtgtctgacctctcaccttaccggcacgagccaatgaaccgtggac 10 Query: 338 cttacccat 346 ||| ||||| Sbjct: 9 ctttcccat 1
>gb|AC007772.6| Drosophila melanogaster clone BACR19P12, complete sequence Length = 186607 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||||||| |||||||||||||||| ||| ||||| |||||||| || Sbjct: 135516 cttcttcttctcctgcttctccaccttgggcgtctgtcccttgaccttgccggcacgggc 135457 Query: 323 cagcgatccgtgcaccttacc 343 ||| || |||||||||||||| Sbjct: 135456 cagagaaccgtgcaccttacc 135436
>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE Length = 153273 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 207 gcggtgacgaagcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttc 266 ||||||||||| | ||| |||||||| || |||||||| || ||||| || ||||||||| Sbjct: 139058 gcggtgacgaatctgcgattgtactgcatacgcttgtgagcacggccacggggctgcttc 139117 Query: 267 ttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagc 326 |||||||| ||||| || |||||||| || || |||| || || |||||||| |||| Sbjct: 139118 ttcttgtcttgcttagctaccttgggtgtttgtcccctaactttaccggcacgggccaat 139177 Query: 327 gatccgtgcaccttacc 343 || ||||| |||||||| Sbjct: 139178 gaaccgtgaaccttacc 139194
>gb|AY071683.2| Drosophila melanogaster RH08962 full insert cDNA Length = 547 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||||||| |||||||||||||||| ||| ||||| |||||||| || Sbjct: 341 cttcttcttctcctgcttctccaccttgggcgtctgtcccttgaccttgccggcacgggc 282 Query: 323 cagcgatccgtgcaccttacc 343 ||| || |||||||||||||| Sbjct: 281 cagagaaccgtgcaccttacc 261
>ref|NM_169933.1| Drosophila melanogaster Ribosomal protein S30 CG15697-RB, transcript variant B (RpS30), mRNA Length = 500 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||||||| |||||||||||||||| ||| ||||| |||||||| || Sbjct: 312 cttcttcttctcctgcttctccaccttgggcgtctgtcccttgaccttgccggcacgggc 253 Query: 323 cagcgatccgtgcaccttacc 343 ||| || |||||||||||||| Sbjct: 252 cagagaaccgtgcaccttacc 232
>ref|NM_142665.1| Drosophila melanogaster Ribosomal protein S30 CG15697-RA, transcript variant A (RpS30), mRNA Length = 572 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||||||| |||||||||||||||| ||| ||||| |||||||| || Sbjct: 384 cttcttcttctcctgcttctccaccttgggcgtctgtcccttgaccttgccggcacgggc 325 Query: 323 cagcgatccgtgcaccttacc 343 ||| || |||||||||||||| Sbjct: 324 cagagaaccgtgcaccttacc 304
>gb|AY061910.1| Arabidopsis thaliana At2g19750/F6F22.22 mRNA, complete cds Length = 189 Score = 81.8 bits (41), Expect = 2e-12 Identities = 152/189 (80%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || ||||| || || | ||||||||| || || || |||||||||||||| Sbjct: 189 ctacttctctgatgagtttggtcctctcttcttgccaaaaccaacaacggcggtgacgaa 130 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 |||||||||| || | ||||| || || || || || |||| ||||||||||||||| Sbjct: 129 acggcggttgtgttgcagacgcttatgagcacgaccacgaggcttcttcttcttgtcctg 70 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 69 cttagccactttaggtgtctgacctctcaccttaccggcacgagccaatgaaccgtggac 10 Query: 338 cttacccat 346 ||| ||||| Sbjct: 9 ctttcccat 1
>gb|AY052341.1| Arabidopsis thaliana At2g19750/F6F22.22 mRNA, complete cds Length = 552 Score = 81.8 bits (41), Expect = 2e-12 Identities = 152/189 (80%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || ||||| || || | ||||||||| || || || |||||||||||||| Sbjct: 268 ctacttctctgatgagtttggtcctctcttcttgccaaaaccaacaacggcggtgacgaa 209 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 |||||||||| || | ||||| || || || || || |||| ||||||||||||||| Sbjct: 208 acggcggttgtgttgcagacgcttatgagcacgaccacgaggcttcttcttcttgtcctg 149 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 148 cttagccactttaggtgtctgacctctcaccttaccggcacgagccaatgaaccgtggac 89 Query: 338 cttacccat 346 ||| ||||| Sbjct: 88 ctttcccat 80
>emb|BX822051.1|CNS0AA4U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 81.8 bits (41), Expect = 2e-12 Identities = 152/189 (80%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || ||||| || || | ||||||||| || || || |||||||||||||| Sbjct: 253 ctacttctctgatgagtttggtcctctcttcttgccaaaaccaacaacggcggtgacgaa 194 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 |||||||||| || | ||||| || || || || || |||| ||||||||||||||| Sbjct: 193 acggcggttgtgttgcagacgcttatgagcacgaccacgaggcttcttcttcttgtcctg 134 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 133 cttagccactttaggtgtctgacctctcaccttaccggcacgagccaatgaaccgtggac 74 Query: 338 cttacccat 346 ||| ||||| Sbjct: 73 ctttcccat 65
>gb|AY088766.1| Arabidopsis thaliana clone 9466 mRNA, complete sequence Length = 516 Score = 81.8 bits (41), Expect = 2e-12 Identities = 152/189 (80%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || ||||| || || | ||||||||| || || || |||||||||||||| Sbjct: 272 ctacttctctgatgagtttggtcctctcttcttgccaaaaccaacaacggcggtgacgaa 213 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 |||||||||| || | ||||| || || || || || |||| ||||||||||||||| Sbjct: 212 acggcggttgtgttgcagacgcttatgagcacgaccacgaggcttcttcttcttgtcctg 153 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 152 cttagccactttaggtgtctgacctctcaccttaccggcacgagccaatgaaccgtggac 93 Query: 338 cttacccat 346 ||| ||||| Sbjct: 92 ctttcccat 84
>gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70 of 118 of the complete sequence Length = 224529 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||||||| |||||||||||||||| ||| ||||| |||||||| || Sbjct: 97540 cttcttcttctcctgcttctccaccttgggcgtctgtcccttgaccttgccggcacgggc 97481 Query: 323 cagcgatccgtgcaccttacc 343 ||| || |||||||||||||| Sbjct: 97480 cagagaaccgtgcaccttacc 97460
>ref|NM_119084.2| Arabidopsis thaliana structural constituent of ribosome AT4G29390 mRNA, complete cds Length = 495 Score = 75.8 bits (38), Expect = 1e-10 Identities = 152/190 (80%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || |||||||| || | ||||||||| || || || |||||||| ||||| Sbjct: 270 ctacttctcagaagagttgggtcctctcttcttgccaaatccaacaacggcggttacgaa 211 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||| |||| || | | ||||| || ||||| || |||| ||||||||| ||||| Sbjct: 210 acggcgattgtgttgcaaccttttgtgagcacggccacgtggcttcttcttcttatcctg 151 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 150 ctttgccactttcggtgtctgacctctcaccttaccggcacgagccaaggaaccgtgtac 91 Query: 338 cttacccatg 347 |||||||||| Sbjct: 90 cttacccatg 81
>gb|BT012137.1| Arabidopsis thaliana At4g29390 mRNA, complete cds Length = 237 Score = 75.8 bits (38), Expect = 1e-10 Identities = 152/190 (80%) Strand = Plus / Plus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || |||||||| || | ||||||||| || || || |||||||| ||||| Sbjct: 25 ctacttctcagaagagttgggtcctctcttcttgccaaatccaacaacggcggttacgaa 84 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||| |||| || | | ||||| || ||||| || |||| ||||||||| ||||| Sbjct: 85 acggcgattgtgttgcaaccttttgtgagcacggccacgtggcttcttcttcttatcctg 144 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 145 ctttgccactttcggtgtctgacctctcaccttaccggcacgagccaaggaaccgtgtac 204 Query: 338 cttacccatg 347 |||||||||| Sbjct: 205 cttacccatg 214
>gb|BT011203.1| Arabidopsis thaliana At4g29390 gene, complete cds Length = 390 Score = 75.8 bits (38), Expect = 1e-10 Identities = 152/190 (80%) Strand = Plus / Plus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || |||||||| || | ||||||||| || || || |||||||| ||||| Sbjct: 142 ctacttctcagaagagttgggtcctctcttcttgccaaatccaacaacggcggttacgaa 201 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||| |||| || | | ||||| || ||||| || |||| ||||||||| ||||| Sbjct: 202 acggcgattgtgttgcaaccttttgtgagcacggccacgtggcttcttcttcttatcctg 261 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 262 ctttgccactttcggtgtctgacctctcaccttaccggcacgagccaaggaaccgtgtac 321 Query: 338 cttacccatg 347 |||||||||| Sbjct: 322 cttacccatg 331
>emb|BX828921.1|CNS0A2HH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL51ZA04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 438 Score = 75.8 bits (38), Expect = 1e-10 Identities = 152/190 (80%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || |||||||| || | ||||||||| || || || |||||||| ||||| Sbjct: 236 ctacttctcagaagagttgggtcctctcttcttgccaaatccaacaacggcggttacgaa 177 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 ||||| |||| || | | ||||| || ||||| || |||| ||||||||| ||||| Sbjct: 176 acggcgattgtgttgcaaccttttgtgagcacggccacgtggcttcttcttcttatcctg 117 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 116 ctttgccactttcggtgtctgacctctcaccttaccggcacgagccaaggaaccgtgtac 57 Query: 338 cttacccatg 347 |||||||||| Sbjct: 56 cttacccatg 47
>gb|AY232248.1| Drosophila yakuba clone yak-ad_CG15697 mRNA sequence Length = 396 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||||||| | |||||||||||||| ||| ||||| |||||||| || Sbjct: 294 cttcttcttctcctgcttctctaccttgggcgtctgtcccttgaccttgccggcacgggc 235 Query: 323 cagcgatccgtgcaccttacc 343 ||| || |||||||||||||| Sbjct: 234 cagagaaccgtgcaccttacc 214
>gb|AY231796.1| Drosophila yakuba clone yak-em_CG15697 mRNA sequence Length = 396 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||||||| | |||||||||||||| ||| ||||| |||||||| || Sbjct: 294 cttcttcttctcctgcttctctaccttgggcgtctgtcccttgaccttgccggcacgggc 235 Query: 323 cagcgatccgtgcaccttacc 343 ||| || |||||||||||||| Sbjct: 234 cagagaaccgtgcaccttacc 214
>emb|BX821809.1|CNS0A8DZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 583 Score = 73.8 bits (37), Expect = 4e-10 Identities = 151/189 (79%) Strand = Plus / Minus Query: 158 ctacttctccgacgagttggggccacgcttcttgccgaagccgacgacggcggtgacgaa 217 ||||||||| || ||||| || || | ||||||||| || || || |||||||||||||| Sbjct: 251 ctacttctctgatgagtttggtcctctcttcttgccaaaaccaacaacggcggtgacgaa 192 Query: 218 gcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttcttgtcctg 277 |||||||||| || | ||||| | || || || || |||| ||||||||||||||| Sbjct: 191 acggcggttgtgttgcagacgcttattagcacgaccacgaggcttcttcttcttgtcctg 132 Query: 278 cttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatccgtgcac 337 ||| ||||| || || ||||| || | |||||| |||||||| |||| || ||||| || Sbjct: 131 cttagccactttaggtgtctgacctctcaccttaccggcacgagccaatgaaccgtggac 72 Query: 338 cttacccat 346 ||| ||||| Sbjct: 71 ctttcccat 63
>gb|DQ066328.1| Ixodes scapularis isolate IS-6-12L-102 40S ribosomal protein S30 mRNA, complete cds Length = 405 Score = 69.9 bits (35), Expect = 6e-09 Identities = 113/139 (81%) Strand = Plus / Minus Query: 202 cgacggcggtgacgaagcggcggttgtactggatgcgcttgtgggcgcggccgcgcggct 261 |||||||| |||||||||| | |||||||||||||||| | | ||| || ||| | || Sbjct: 358 cgacggcgttgacgaagcgcctgttgtactggatgcgcctcttggcacgcccggtcttct 299 Query: 262 gcttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcg 321 ||||||||| |||||||| ||||||| || ||||| ||| |||||| |||||||| | Sbjct: 298 tcttcttcttctcctgcttgtccacctttggtgtctgtcccttcacctttccggcacgag 239 Query: 322 ccagcgatccgtgcacctt 340 | || |||||||| ||||| Sbjct: 238 cgagagatccgtggacctt 220
>emb|BX819364.1|CNS0AA8V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 536 Score = 67.9 bits (34), Expect = 3e-08 Identities = 130/162 (80%) Strand = Plus / Minus Query: 185 cttcttgccgaagccgacgacggcggtgacgaagcggcggttgtactggatgcgcttgtg 244 ||||||||| || || || |||||||||||||| |||||||||| || | ||||| || Sbjct: 215 cttcttgccaaaaccaacaacggcggtgacgaaacggcggttgtgttgtagacgcttatg 156 Query: 245 ggcgcggccgcgcggctgcttcttcttgtcctgcttcgccaccttgggcgtctggccccg 304 || || || || |||| |||||||||||||||||| ||||| || || ||||| | | Sbjct: 155 agcacgaccacgaggcttcttcttcttgtcctgcttagccactttaggtgtctgacttct 96 Query: 305 caccttcccggcacgcgccagcgatccgtgcaccttacccat 346 |||||| |||||||| |||| || ||||| ||||| ||||| Sbjct: 95 caccttaccggcacgagccaatgaaccgtggacctttcccat 54
>gb|AY357069.1| Hippocampus comes 40S ribosomal protein S30 mRNA, complete cds Length = 542 Score = 65.9 bits (33), Expect = 1e-07 Identities = 108/133 (81%) Strand = Plus / Minus Query: 211 tgacgaagcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgcttcttct 270 |||||||||| ||||||||||||||||| | ||||||||| | || |||||||| Sbjct: 382 tgacgaagcgtcggttgtactggatgcgacgcttggcgcggccagtcttcttcttcttct 323 Query: 271 tgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgccagcgatc 330 | |||||||| |||||||||| |||||||| | ||| || || ||||| ||||| || | Sbjct: 322 tctcctgcttatccaccttgggggtctggcctctcacttttccagcacgggccagagagc 263 Query: 331 cgtgcaccttacc 343 |||| |||||||| Sbjct: 262 cgtggaccttacc 250
>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence Length = 130194 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 205 cggcggtgacgaagcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgct 264 ||||||||||||| ||||| ||||| || || |||||||| || || || || ||||||| Sbjct: 18053 cggcggtgacgaaacggcgattgtattgcatacgcttgtgagcacgtccacgtggctgct 17994 Query: 265 tcttcttgtcctgctt 280 |||||||||| ||||| Sbjct: 17993 tcttcttgtcttgctt 17978
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 63.9 bits (32), Expect = 4e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 205 cggcggtgacgaagcggcggttgtactggatgcgcttgtgggcgcggccgcgcggctgct 264 ||||||||||||| |||||||||| || | ||||| || || || || || |||| || Sbjct: 108104 cggcggtgacgaaacggcggttgtgttgcagacgcttatgagcacgaccacgaggcttct 108163 Query: 265 tcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgcca 324 |||||||||||||||| ||||| || || ||||| || | |||||| |||||||| |||| Sbjct: 108164 tcttcttgtcctgcttagccactttaggtgtctgacctctcaccttaccggcacgagcca 108223
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 60.0 bits (30), Expect = 6e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 258 ggctgcttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggca 317 |||||||||||||| |||||||| ||||| ||||||||| |||||| |||||| Sbjct: 679611 ggctgcttcttcttctcctgcttgctaaccttcggcgtctggtttttcaccttgccggca 679670 Query: 318 cgcgccagcgatccgtgcaccttacccatg 347 || |||||||||||||| ||||| |||||| Sbjct: 679671 cgggccagcgatccgtggaccttccccatg 679700 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 258 ggctgcttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggca 317 |||||||||||||| |||||||| ||||| ||||||||| |||||| ||||| Sbjct: 679145 ggctgcttcttcttctcctgcttgctaaccttcggcgtctggtttttcaccttgccggcg 679204 Query: 318 cgcgccagcgatccgtgcaccttacccat 346 || |||||||||||||| ||||| ||||| Sbjct: 679205 cgggccagcgatccgtggaccttccccat 679233 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaaggagggg 134 ||||| |||||||||||||||| ||||| Sbjct: 344493 aacaaacaaacaaacaaaaaagaagggg 344520
>gb|AC074259.14| Trypanosoma brucei chromosome 6 clone RPCI93-4M18, complete sequence Length = 160865 Score = 60.0 bits (30), Expect = 6e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 258 ggctgcttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggca 317 |||||||||||||| |||||||| ||||| ||||||||| |||||| |||||| Sbjct: 38187 ggctgcttcttcttctcctgcttgctaaccttcggcgtctggtttttcaccttgccggca 38246 Query: 318 cgcgccagcgatccgtgcaccttacccatg 347 || |||||||||||||| ||||| |||||| Sbjct: 38247 cgggccagcgatccgtggaccttccccatg 38276 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 258 ggctgcttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggca 317 |||||||||||||| |||||||| ||||| ||||||||| |||||| ||||| Sbjct: 37721 ggctgcttcttcttctcctgcttgctaaccttcggcgtctggtttttcaccttgccggcg 37780 Query: 318 cgcgccagcgatccgtgcaccttacccat 346 || |||||||||||||| ||||| ||||| Sbjct: 37781 cgggccagcgatccgtggaccttccccat 37809
>ref|XM_821669.1| Trypanosoma brucei TREU927 clone RPCI93-4M18 40S ribosomal protein S30 (Tb927.6.2110) partial mRNA Length = 201 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 258 ggctgcttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggca 317 |||||||||||||| |||||||| ||||| ||||||||| |||||| |||||| Sbjct: 89 ggctgcttcttcttctcctgcttgctaaccttcggcgtctggtttttcaccttgccggca 30 Query: 318 cgcgccagcgatccgtgcaccttacccat 346 || |||||||||||||| ||||| ||||| Sbjct: 29 cgggccagcgatccgtggaccttccccat 1
>gb|AY674244.1| Ixodes pacificus clone IP_7_60_92_99_CLU 40S ribosomal protein S30 mRNA, complete cds Length = 402 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 202 cgacggcggtgacgaagcggcggttgtactggatgcgc 239 |||||||| |||||||||| | |||||||||||||||| Sbjct: 355 cgacggcgttgacgaagcgcctgttgtactggatgcgc 318
>ref|XM_753132.1| Ustilago maydis 521 hypothetical protein (UM02078.1) partial mRNA Length = 798 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 306 accttcccggcacgcgccagcgatccgtgcaccttacccat 346 ||||| ||||||||||| || |||||||| ||||||||||| Sbjct: 41 accttaccggcacgcgcgagggatccgtgaaccttacccat 1
>ref|XM_821618.1| Trypanosoma brucei TREU927 clone RPCI93-4M18 40S ribosomal protein S30 (Tb927.6.2100) partial mRNA Length = 201 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Minus Query: 258 ggctgcttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggca 317 |||||||||||||| |||||||| ||||| ||||||||| |||||| ||||| Sbjct: 89 ggctgcttcttcttctcctgcttgctaaccttcggcgtctggtttttcaccttgccggcg 30 Query: 318 cgcgccagcgatccgtgcaccttacccat 346 || |||||||||||||| ||||| ||||| Sbjct: 29 cgggccagcgatccgtggaccttccccat 1
>emb|BX064327.1|CNS09LSR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC46CC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 727 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 382 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 323 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 322 gagcgaaccgtgcaccttacc 302
>emb|BX048818.1|CNS099TY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24BA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 631 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 310 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 369 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 370 gagcgaaccgtgcaccttacc 390
>emb|BX044197.1|CNS0969L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC17CE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 693 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 352 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 293 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 292 gagcgaaccgtgcaccttacc 272
>emb|BX040902.1|CNS093Q2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC11DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 707 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 363 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 304 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 303 gagcgaaccgtgcaccttacc 283
>emb|BX034577.1|CNS08YUD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA50CB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 441 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 347 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 288 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 287 gagcgaaccgtgcaccttacc 267
>emb|BX030335.1|CNS08VKJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA45BB09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 718 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 355 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 296 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 295 gagcgaaccgtgcaccttacc 275
>emb|BX026461.1|CNS08SKX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA4DA05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 660 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 317 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 258 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 257 gagcgaaccgtgcaccttacc 237
>emb|BX025808.1|CNS08S2S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA39CF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 710 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 374 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 315 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 314 gagcgaaccgtgcaccttacc 294
>emb|BX025321.1|CNS08RP9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38DC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 549 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 284 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 225 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 224 gagcgaaccgtgcaccttacc 204
>emb|BX025277.1|CNS08RO1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38DA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 497 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 239 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 180 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 179 gagcgaaccgtgcaccttacc 159
>emb|BX024620.1|CNS08R5S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA37CE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 659 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 325 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 266 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 265 gagcgaaccgtgcaccttacc 245
>emb|BX015266.1|CNS08JXY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA22DH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 682 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 350 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 291 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 290 gagcgaaccgtgcaccttacc 270
>emb|BX011328.1|CNS08GWK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA18AE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 571 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 343 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 284 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 283 gagcgaaccgtgcaccttacc 263
>emb|BX009900.1|CNS08FSW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 703 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 352 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 293 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 292 gagcgaaccgtgcaccttacc 272
>emb|BX009795.1|CNS08FPZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 705 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 357 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 298 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 297 gagcgaaccgtgcaccttacc 277
>ref|XM_311180.2| Anopheles gambiae str. PEST ENSANGP00000019081 (ENSANGG00000016592), mRNA Length = 705 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| |||| ||| | ||||||||||| || ||| ||| || |||||||| || Sbjct: 389 cttcttcttttccttcttttcgaccttgggcgtttgtcccttcactttgccggcacgggc 330 Query: 323 cagcgatccgtgcaccttacc 343 ||||| |||||||||||||| Sbjct: 329 gagcgaaccgtgcaccttacc 309
>gb|AC007993.15|AC007993 Homo sapiens chromosome 17, clone RP11-527L4, complete sequence Length = 141704 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggag 131 ||||||||||||||||||||||||| Sbjct: 69605 aacaagcaaacaaacaaaaaaggag 69581
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence Length = 182415 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 106 gaacaagcaaacaaacaaaaaagga 130 ||||||||||||||||||||||||| Sbjct: 102480 gaacaagcaaacaaacaaaaaagga 102456
>gb|AC115881.8| Mus musculus chromosome 6, clone RP24-365K16, complete sequence Length = 164311 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 105 tgaacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||||| Sbjct: 126230 tgaacaagcaaacaaacaaaaaag 126253
>gb|AC125321.4| Mus musculus BAC clone RP23-371B13 from chromosome 9, complete sequence Length = 196150 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagggg 134 ||||| |||||||||||||||||||||| Sbjct: 103168 aacaaacaaacaaacaaaaaaggagggg 103141
>emb|AL731561.12| Human DNA sequence from clone RP11-463P17 on chromosome 10 Contains a novel gene, gene FLJ32104, a novel gene, the RBP3 gene for retinol binding protein 3, the GDF2 gene for growth differentiation factor 2, the GDF10 gene for growth differentiation factor 10 and three CpG islands, complete sequence Length = 204512 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 105 tgaacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||||| Sbjct: 66411 tgaacaagcaaacaaacaaaaaag 66434
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagggg 134 ||||| |||||||||||||||||||||| Sbjct: 126008 aacaaacaaacaaacaaaaaaggagggg 125981 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaagga 130 |||||||| ||||||||||||||| Sbjct: 132914 aacaagcagacaaacaaaaaagga 132937
>gb|AC079822.13| Homo sapiens 3 BAC RP11-413G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181672 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 110 aagcaaacaaacaaaaaaggaggg 133 |||||||||||||||||||||||| Sbjct: 18548 aagcaaacaaacaaaaaaggaggg 18525
>emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in linkage group 10, complete sequence Length = 272498 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 108 acaagcaaacaaacaaaaaaggag 131 |||||||||||||||||||||||| Sbjct: 67581 acaagcaaacaaacaaaaaaggag 67604
>gb|AC155727.6| Mus musculus 6 BAC RP24-194N1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199400 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagggg 134 ||||||||||||||||||||||| |||| Sbjct: 149175 aacaagcaaacaaacaaaaaaggggggg 149148
>gb|AC160399.6| Mus musculus 6 BAC RP23-218B15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196625 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaaggagggg 134 ||||||||||||||||||||||| |||| Sbjct: 120233 aacaagcaaacaaacaaaaaaggggggg 120260
>emb|BX820425.1|CNS0AA74 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZH06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 539 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 185 cttcttgccgaagccgacgacggcggtgacgaagcggcggttgt 228 ||||||||| || || || |||||||||||||| |||||||||| Sbjct: 228 cttcttgccaaaaccaacaacggcggtgacgaaacggcggttgt 185
>gb|AC154840.2| Mus musculus BAC clone RP23-61I7 from chromosome 14, complete sequence Length = 195596 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaagga 130 |||||||||||||||||||||||| Sbjct: 59221 aacaagcaaacaaacaaaaaagga 59198 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaa 126 |||||||||||||||||||| Sbjct: 125103 aacaagcaaacaaacaaaaa 125122 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaa 126 |||||||||||||||||||| Sbjct: 124691 aacaagcaaacaaacaaaaa 124672
>gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435j12, complete sequence Length = 218107 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagggg 134 |||||||||||||||||||||| ||||| Sbjct: 8380 aacaagcaaacaaacaaaaaagaagggg 8353
>gb|AC170804.2| Mus musculus BAC clone RP24-435B12 from chromosome 6, complete sequence Length = 143675 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 tgaacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||||| Sbjct: 83404 tgaacaagcaaacaaacaaaaaa 83382
>gb|AC120397.7| Mus musculus chromosome 18, clone RP24-332E21, complete sequence Length = 178502 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 113 caaacaaacaaaaaaggaggggt 135 ||||||||||||||||||||||| Sbjct: 56348 caaacaaacaaaaaaggaggggt 56326
>gb|BC091402.1| Rattus norvegicus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein, mRNA (cDNA clone MGC:109525 IMAGE:7324328), complete cds Length = 550 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||| || ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 368 cttcttcttttcctgtttggccaccttgggagtctgacctctcactttcccagcacgagc 309 Query: 323 cag 325 ||| Sbjct: 308 cag 306
>ref|NM_001012739.1| Rattus norvegicus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein (Fau), mRNA Length = 550 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||| || ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 368 cttcttcttttcctgtttggccaccttgggagtctgacctctcactttcccagcacgagc 309 Query: 323 cag 325 ||| Sbjct: 308 cag 306
>emb|X62671.1|RRFUSP Rattus rattus mRNA for hybrid protein (ubiquitin-like protein/rps30) Length = 522 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||| || ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 358 cttcttcttttcctgtttggccaccttgggagtctgacctctcactttcccagcacgagc 299 Query: 323 cag 325 ||| Sbjct: 298 cag 296
>emb|AL603702.14| Mouse DNA sequence from clone RP23-406A14 on chromosome 11 Contains a protease (prosome, macropain) 26S subunit ATPase 1 (Psmc1) pseudogene and a CpG island, complete sequence Length = 197265 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaagg 129 ||||||||||||||||||||||| Sbjct: 118184 aacaagcaaacaaacaaaaaagg 118206
>gb|AC164162.2| Mus musculus BAC clone RP23-253E17 from chromosome 16, complete sequence Length = 174250 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 tgaacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||||| Sbjct: 66487 tgaacaagcaaacaaacaaaaaa 66465
>gb|AC026130.15| Homo sapiens chromosome 17, clone RP11-801J18, complete sequence Length = 182909 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggaggg 133 ||||| ||||||||||||||||||||| Sbjct: 114911 aacaaacaaacaaacaaaaaaggaggg 114885
>gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-3M10, complete sequence Length = 206093 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 caagcaaacaaacaaaaaaggag 131 ||||||||||||||||||||||| Sbjct: 71781 caagcaaacaaacaaaaaaggag 71759
>gb|BC102873.1| Bos taurus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30, mRNA (cDNA clone MGC:128133 IMAGE:7944155), complete cds Length = 635 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| || ||||| ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 411 cttcttcttctcttgcttggccaccttgggagtctgacctctcactttcccagcacgggc 352 Query: 323 cag 325 ||| Sbjct: 351 cag 349
>emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in linkage group 18, complete sequence Length = 154557 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 108 acaagcaaacaaacaaaaaagga 130 ||||||||||||||||||||||| Sbjct: 62223 acaagcaaacaaacaaaaaagga 62245
>gb|AC013449.8| Homo sapiens BAC clone RP11-558C24 from 2, complete sequence Length = 120997 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaagg 129 ||||||||||||||||||||||| Sbjct: 90749 aacaagcaaacaaacaaaaaagg 90771
>gb|AC154537.3| Mus musculus BAC clone RP23-451F20 from chromosome 13, complete sequence Length = 181229 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaagg 129 ||||||||||||||||||||||| Sbjct: 86941 aacaagcaaacaaacaaaaaagg 86963
>ref|NM_213937.1| Sus scrofa ubiquitin-like/S30 ribosomal fusion protein (FAU), mRNA Length = 499 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||| || ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 350 cttcttcttctcctgtttggccaccttgggagtctgacctctcactttcccagcacgggc 291 Query: 323 cag 325 ||| Sbjct: 290 cag 288
>ref|XM_574605.1| PREDICTED: Rattus norvegicus similar to Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) (LOC499305), mRNA Length = 527 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||| || ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 420 cttcttcttttcctgtttggccaccttgggagtctgacctctcactttcccagcacgagc 361 Query: 323 cag 325 ||| Sbjct: 360 cag 358
>gb|AF520959.1| Bos taurus ubiquitin-like/S30 ribosomal fusion protein mRNA, complete cds Length = 482 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| || ||||| ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 333 cttcttcttctcttgcttggccaccttgggagtctgacctctcactttcccagcacgggc 274 Query: 323 cag 325 ||| Sbjct: 273 cag 271
>gb|AY911375.1| Bos taurus clone IMAGE:7961514 ubiquitin-like/S30 ribosomal fusion protein mRNA, complete cds Length = 404 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| || ||||| ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 255 cttcttcttctcttgcttggccaccttgggagtctgacctctcactttcccagcacgggc 196 Query: 323 cag 325 ||| Sbjct: 195 cag 193
>gb|U72543.1|SSU72543 Sus scrofa ubiquitin-like/S30 ribosomal fusion protein (fau) mRNA, complete cds Length = 499 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| ||||| || ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 350 cttcttcttctcctgtttggccaccttgggagtctgacctctcactttcccagcacgggc 291 Query: 323 cag 325 ||| Sbjct: 290 cag 288
>ref|NM_174731.3| Bos taurus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 (FAU), mRNA Length = 635 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Minus Query: 263 cttcttcttgtcctgcttcgccaccttgggcgtctggccccgcaccttcccggcacgcgc 322 ||||||||| || ||||| ||||||||||| ||||| || | ||| ||||| ||||| || Sbjct: 411 cttcttcttctcttgcttggccaccttgggagtctgacctctcactttcccagcacgggc 352 Query: 323 cag 325 ||| Sbjct: 351 cag 349
>emb|AL845171.5| Mouse DNA sequence from clone RP23-38N8 on chromosome 4, complete sequence Length = 229784 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 tgaacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||||| Sbjct: 169399 tgaacaagcaaacaaacaaaaaa 169421
>gb|AC155166.4| Mus musculus BAC clone RP24-69M8 from chromosome 8, complete sequence Length = 212711 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 49968 aacaagcaaacaaacaaaaaag 49989
>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete sequence Length = 258658 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 113 caaacaaacaaaaaaggagggg 134 |||||||||||||||||||||| Sbjct: 13318 caaacaaacaaaaaaggagggg 13339
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 478974 aacaagcaaacaaacaaaaaag 478953
>gb|AC159435.1| Trypanosoma brucei chromosome 8 clone RPCI93-29H22, complete sequence Length = 148464 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 34927 aacaagcaaacaaacaaaaaag 34948
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 1245150 aacaagcaaacaaacaaaaaag 1245171 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaa 126 |||||||||||||||||||| Sbjct: 278320 aacaagcaaacaaacaaaaa 278301
>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence Length = 193057 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 114990 aacaagcaaacaaacaaaaaag 114969
>gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, complete sequence Length = 174995 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 ||||| |||||||||||||||||||| Sbjct: 74510 aacaaacaaacaaacaaaaaaggagg 74535
>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence Length = 210969 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 56787 aacaagcaaacaaacaaaaaag 56766
>gb|BT013797.1| Lycopersicon esculentum clone 132717F, mRNA sequence Length = 1981 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 acaaagcagtgagatttccattacca 28 ||||||||| |||||||||||||||| Sbjct: 1185 acaaagcagggagatttccattacca 1210
>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence Length = 255663 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 tgaacaagcaaacaaacaaaaa 126 |||||||||||||||||||||| Sbjct: 60903 tgaacaagcaaacaaacaaaaa 60882
>gb|AC163616.3| Mus musculus BAC clone RP23-114P22 from chromosome 3, complete sequence Length = 212857 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 148467 aacaagcaaacaaacaaaaaag 148488
>gb|AC110164.26| Mus musculus chromosome 3, clone RP23-167C5, complete sequence Length = 199235 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 tgaacaagcaaacaaacaaaaa 126 |||||||||||||||||||||| Sbjct: 5446 tgaacaagcaaacaaacaaaaa 5425
>gb|AC132377.3| Mus musculus BAC clone RP24-81F14 from chromosome 16, complete sequence Length = 173662 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 149516 aacaagcaaacaaacaaaaaag 149537
>gb|AC113011.9| Mus musculus chromosome 16, clone RP23-173D22, complete sequence Length = 210962 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 46793 aacaagcaaacaaacaaaaaag 46772
>gb|AC122485.3| Mus musculus BAC clone RP24-377J10 from chromosome 3, complete sequence Length = 157739 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 106 gaacaagcaaacaaacaaaaaaggag 131 |||||| ||||||||||||||||||| Sbjct: 30629 gaacaaacaaacaaacaaaaaaggag 30654
>gb|AC124408.4| Mus musculus BAC clone RP24-262E22 from chromosome 14, complete sequence Length = 159082 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 81515 aacaagcaaacaaacaaaaaag 81494
>gb|AC122383.4| Mus musculus BAC clone RP23-479O8 from chromosome 7, complete sequence Length = 196195 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 49065 aacaagcaaacaaacaaaaaag 49086
>gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complete sequence Length = 195006 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 106 gaacaagcaaacaaacaaaaaaggag 131 |||||| ||||||||||||||||||| Sbjct: 5452 gaacaaacaaacaaacaaaaaaggag 5427
>gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, complete sequence Length = 221920 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 105072 aacaagcaaacaaacaaaaaag 105093
>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence Length = 168940 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 tgaacaagcaaacaaacaaaaaagga 130 ||||||| |||||||||||||||||| Sbjct: 123730 tgaacaaacaaacaaacaaaaaagga 123755
>gb|AC127332.3| Mus musculus BAC clone RP23-136I1 from 5, complete sequence Length = 230629 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 25816 aacaagcaaacaaacaaaaaag 25795
>gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, complete sequence Length = 213229 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 112763 aacaagcaaacaaacaaaaaag 112742
>gb|AC115304.3| Mus musculus BAC clone RP24-156K1 from 15, complete sequence Length = 144026 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 20528 aacaagcaaacaaacaaaaaag 20549
>gb|AC113003.9| Mus musculus chromosome 18, clone RP23-246G4, complete sequence Length = 162882 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 37212 aacaagcaaacaaacaaaaaag 37233
>gb|AC141325.1| Pan troglodytes BAC clone RP43-168D7 from 7, complete sequence Length = 195031 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 145194 aacaagcaaacaaacaaaaaag 145173
>emb|CR753843.8| Zebrafish DNA sequence from clone DKEY-169H1 in linkage group 14, complete sequence Length = 112358 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaacaagcaaacaaacaaaaaa 127 |||||||||||||||||||||| Sbjct: 50227 gaacaagcaaacaaacaaaaaa 50206
>emb|Z86062.1|HS121G13 Human DNA sequence from clone RP1-121G13 on chromosome 6q16 Contains the 3' end of the RNAH gene for an RNA helicase, the 5' end of the SIM1 gene for single-minded homolog 1 (Drosophila), an RP42 homolog pseudogene a novel gene and three CpG islands, complete sequence Length = 176932 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 tgaacaagcaaacaaacaaaaa 126 |||||||||||||||||||||| Sbjct: 61876 tgaacaagcaaacaaacaaaaa 61855
>emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chromosome 1 Contains the 3' end of the MGST3 gene for microsomal glutathione S-transferase 3, the ALDH9A1 gene for aldehyde dehydrogenase 9 family (member A1), a ribosomal protein S13 (RPS13) pseudogene, a ribosomal protein L21 (RPL21) pseudogene, two novel genes (FLJ42974), a carbonic anhydrase XIV (CA14) pseudogene, the gene for putative membrane protein (LOC54499), a ribosomal protein L26 (RPL26) pseudogene, the 5' end of (tbc), the 5' end of the UMPK gene for uridine monophosphate kinase and two CpG islands, complete sequence Length = 188217 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 111513 aacaagcaaacaaacaaaaaag 111534 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 158800 aacaagcaaacaaacaaaaaa 158820 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaa 126 |||||||||||||||||||| Sbjct: 147442 aacaagcaaacaaacaaaaa 147423
>emb|AL391865.9| Human DNA sequence from clone RP13-40J16 on chromosome X, complete sequence Length = 151421 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 99460 aacaagcaaacaaacaaaaaag 99439
>emb|AL357117.20| Human DNA sequence from clone RP11-436I24 on chromosome 6 Contains part of the gene for a novel protein (contains KIAA0680), a novel gene and a CpG island, complete sequence Length = 139627 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 88025 aacaagcaaacaaacaaaaaag 88004
>emb|AL356776.21| Human DNA sequence from clone RP11-477E3 on chromosome 6 Contains the 5' end of a gene for a novel WD repeat-containing protein and a nucleoporin pseudogene, complete sequence Length = 170387 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 133753 aacaagcaaacaaacaaaaaag 133774
>emb|AL355985.18| Human DNA sequence from clone RP11-98O17 on chromosome 9 Contains a putative novel pseudogene, complete sequence Length = 64969 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 ||||||||||||||||||| |||||| Sbjct: 255 aacaagcaaacaaacaaaacaggagg 230
>emb|AL158154.28| Human DNA sequence from clone RP11-383M4 on chromosome 9 Contains two novel genes and three putative novel pseudogenes, complete sequence Length = 189319 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 ||||||||||||||||||| |||||| Sbjct: 187574 aacaagcaaacaaacaaaacaggagg 187549
>gb|AC113194.8| Homo sapiens chromosome 8, clone RP11-1070A24, complete sequence Length = 166015 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 102409 aacaagcaaacaaacaaaaaag 102430
>gb|AC158926.4| Mus musculus chromosome 3, clone RP24-93J4, complete sequence Length = 185247 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 26160 aacaagcaaacaaacaaaaaag 26181
>emb|AL022717.2|HS201D7 Human DNA sequence from clone RP1-201D7 on chromosome 6p22.1-22.3 Contains part of a novel gene (FLJ20342), complete sequence Length = 100733 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaacaagcaaacaaacaaaaaa 127 |||||||||||||||||||||| Sbjct: 35947 gaacaagcaaacaaacaaaaaa 35968
>gb|AC163678.3| Mus musculus BAC clone RP24-104D14 from chromosome 10, complete sequence Length = 196603 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 89801 aacaagcaaacaaacaaaaaag 89822
>emb|AL591496.13| Mouse DNA sequence from clone RP23-384C18 on chromosome 11 Contains the 3' end of a novel gene, five novel genes, the Serpinf1 and Serpinf2 genes for serine (or cysteine) proteinase inhibitor, clade F) members 1 and 2, an H+ transporting mitochondrial F0 complex ATP synthase subunit c (subunit 9) isoform 1 (Atp5g1) pseudogene, the Prpf8 gene for pre-mRNA processing factor 8, the gene for the ortholog of human scavenger receptor class F member 1 SCARF1, the 5' end of the gene for novel protein similar to solute carrier family 43 member 1 Slc43a1 and seven CpG islands, complete sequence Length = 205633 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 ||||| |||||||||||||||||||| Sbjct: 122472 aacaaacaaacaaacaaaaaaggagg 122447
>gb|AC002121.1| Genomic sequence from Mouse 11, complete sequence Length = 84056 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 ||||| |||||||||||||||||||| Sbjct: 78078 aacaaacaaacaaacaaaaaaggagg 78103
>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence Length = 222520 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 97545 aacaagcaaacaaacaaaaaag 97566
>gb|AC021649.18| Homo sapiens 3 BAC RP11-321F19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 209521 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 38833 aacaagcaaacaaacaaaaaag 38854
>gb|AC121255.2| Homo sapiens chromosome 3 clone RP11-669E5, complete sequence Length = 16032 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 aagcaaacaaacaaaaaaggag 131 |||||||||||||||||||||| Sbjct: 3909 aagcaaacaaacaaaaaaggag 3930
>gb|AC010296.6| Homo sapiens chromosome 5 clone CTB-155H23, complete sequence Length = 134349 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 |||||||||||||| ||||||||||| Sbjct: 28768 aacaagcaaacaaaaaaaaaaggagg 28743
>gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181191 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 tgaacaagcaaacaaacaaaaa 126 |||||||||||||||||||||| Sbjct: 149189 tgaacaagcaaacaaacaaaaa 149210
>gb|AC090448.5| Homo sapiens chromosome 8, clone RP11-142M8, complete sequence Length = 82020 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 71963 aacaagcaaacaaacaaaaaag 71984 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 27026 aacaagcaaacaaacaaaaaa 27006
>gb|AC078813.13| Homo sapiens 3q BAC RP11-149B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142000 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 71643 aacaagcaaacaaacaaaaaag 71664
>gb|AC099775.2| Homo sapiens chromosome 3 clone RP11-169G24, complete sequence Length = 181443 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 110 aagcaaacaaacaaaaaaggag 131 |||||||||||||||||||||| Sbjct: 1226 aagcaaacaaacaaaaaaggag 1205
>gb|AC092042.2| Homo sapiens chromosome 3 clone RP11-136C24, complete sequence Length = 171974 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 ||||| |||||||||||||||||||| Sbjct: 103037 aacaaacaaacaaacaaaaaaggagg 103012
>gb|AC101979.13| Mus musculus chromosome 3, clone RP24-338A7, complete sequence Length = 161025 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 71816 aacaagcaaacaaacaaaaaag 71837
>emb|CR406246.1| Gallus gallus finished cDNA, clone ChEST877h12 Length = 801 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 663 aacaagcaaacaaacaaaaaag 642
>gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome 10, complete sequence Length = 202346 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 151489 aacaagcaaacaaacaaaaaag 151510
>dbj|AK080271.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630013K22 product:unclassifiable, full insert sequence Length = 1512 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 120 aacaagcaaacaaacaaaaaag 141
>gb|AC007351.40|AC007351 Homo sapiens 12 BAC RP11-492N15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195501 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 190385 aacaagcaaacaaacaaaaaag 190406
>gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419L20, complete sequence Length = 175742 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 52773 aacaagcaaacaaacaaaaaag 52752
>gb|AC015982.9| Homo sapiens BAC clone RP11-554J4 from 2, complete sequence Length = 191546 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 157646 aacaagcaaacaaacaaaaaag 157625
>gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, complete sequence Length = 217045 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 tgaacaagcaaacaaacaaaaa 126 |||||||||||||||||||||| Sbjct: 105861 tgaacaagcaaacaaacaaaaa 105882
>gb|AC154322.1| Mus musculus BAC clone RP23-299P17 from chromosome 14, complete sequence Length = 182146 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 104 gtgaacaagcaaacaaacaaaaaagg 129 |||||||| ||||||||||||||||| Sbjct: 77821 gtgaacaaacaaacaaacaaaaaagg 77796
>gb|AC145987.2| Pan troglodytes BAC clone RP43-165D6 from chromosome 7, complete sequence Length = 158415 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaacaagcaaacaaacaaaaaa 127 |||||||||||||||||||||| Sbjct: 101033 gaacaagcaaacaaacaaaaaa 101054
>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence Length = 207128 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 tgaacaagcaaacaaacaaaaaagga 130 ||||||| |||||||||||||||||| Sbjct: 56664 tgaacaaacaaacaaacaaaaaagga 56689
>gb|AC017033.5| Homo sapiens BAC clone RP11-297J22 from 2, complete sequence Length = 183887 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 69534 aacaagcaaacaaacaaaaaag 69513
>gb|AC020594.6| Homo sapiens BAC clone RP11-322P19 from 2, complete sequence Length = 193410 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 56420 aacaagcaaacaaacaaaaaag 56399
>gb|AC008431.5|AC008431 Homo sapiens chromosome 5 clone CTC-311C22, complete sequence Length = 118947 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 |||||||||||||| ||||||||||| Sbjct: 39281 aacaagcaaacaaaaaaaaaaggagg 39306
>gb|AC108039.4| Homo sapiens BAC clone RP11-210C5 from 2, complete sequence Length = 168612 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggaggggta 136 ||||| ||||||||||||||||||| |||| Sbjct: 25460 aacaaacaaacaaacaaaaaaggagaggta 25431 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 129974 aacaagcaaacaaacaaaaaa 129954
>gb|AC132445.3| Mus musculus BAC clone RP23-173F23 from chromosome unknown, complete sequence Length = 194715 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 46771 aacaagcaaacaaacaaaaaag 46792
>gb|AC133184.3| Mus musculus BAC clone RP24-186A17 from chromosome 5, complete sequence Length = 169357 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 155928 aacaagcaaacaaacaaaaaag 155907
>gb|AC092573.2| Homo sapiens BAC clone RP11-1O7 from 2, complete sequence Length = 171265 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 136719 aacaagcaaacaaacaaaaaag 136740
>gb|AC018752.4|AC018752 Homo sapiens chromosome 5 clone CTC-339F2, complete sequence Length = 206691 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 |||||||||||||| ||||||||||| Sbjct: 39279 aacaagcaaacaaaaaaaaaaggagg 39304
>gb|AF157330.1|MMPRXI3 Mus musculus peroxiredoxin I (PrxI) gene, exons 3-5 Length = 2553 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 1040 aacaagcaaacaaacaaaaaag 1019
>gb|AC149589.2| Mus musculus BAC clone RP23-356I2 from 18, complete sequence Length = 225803 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 75239 aacaagcaaacaaacaaaaaag 75218
>gb|AC007751.3|AC007751 Homo sapiens, clone 5_A_11, complete sequence Length = 158963 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 152869 aacaagcaaacaaacaaaaaag 152848
>gb|AC152984.2| Mus musculus 6 BAC RP23-462B3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185001 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 82265 aacaagcaaacaaacaaaaaag 82244
>gb|AC155637.4| Mus musculus 10 BAC RP24-227O16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159189 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaacaagcaaacaaacaaaaaa 127 |||||||||||||||||||||| Sbjct: 107443 gaacaagcaaacaaacaaaaaa 107422
>gb|AC108782.9| Mus musculus chromosome 8, clone RP23-350C11, complete sequence Length = 221428 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 168326 aacaagcaaacaaacaaaaaag 168347
>dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1171G1 Length = 187189 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 42931 aacaagcaaacaaacaaaaaag 42952
>emb|AL627212.21| Mouse DNA sequence from clone RP23-145E1 on chromosome 4, complete sequence Length = 207362 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 40162 aacaagcaaacaaacaaaaaag 40183
>emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on chromosome X, complete sequence Length = 187999 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 109 caagcaaacaaacaaaaaagga 130 |||||||||||||||||||||| Sbjct: 98327 caagcaaacaaacaaaaaagga 98306
>emb|BX005233.10| Mouse DNA sequence from clone RP23-214I11 on chromosome X, complete sequence Length = 189118 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 166501 aacaagcaaacaaacaaaaaag 166522
>gb|AC133497.4| Mus musculus BAC clone RP24-390A22 from 8, complete sequence Length = 158740 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 90755 aacaagcaaacaaacaaaaaag 90776
>gb|AC147366.5| Mus musculus BAC clone RP23-386J3 from 15, complete sequence Length = 175781 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 51087 aacaagcaaacaaacaaaaaag 51066
>emb|CT033847.5| Mouse DNA sequence from clone RP24-225N8 on chromosome 17, complete sequence Length = 171164 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 64466 aacaagcaaacaaacaaaaaag 64487
>emb|CT030683.6| Mouse DNA sequence from clone RP23-22O8 on chromosome 9, complete sequence Length = 126280 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 37267 aacaagcaaacaaacaaaaaag 37288
>gb|AC002109.1|AC002109 Genomic sequence from Mouse 9, complete sequence Length = 160048 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 117200 aacaagcaaacaaacaaaaaag 117179
>gb|AC069561.37| Mus musculus strain C57BL/6J chromosome 9 clone rp23-263o15, complete sequence Length = 201162 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 62031 aacaagcaaacaaacaaaaaag 62052
>emb|AL831786.7| Mouse DNA sequence from clone RP23-177C18 on chromosome 4, complete sequence Length = 80871 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 66568 aacaagcaaacaaacaaaaaag 66547
>emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chromosome 2, complete sequence Length = 186882 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 100172 aacaagcaaacaaacaaaaaag 100151
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete sequence Length = 191255 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 69021 aacaagcaaacaaacaaaaaag 69000
>emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chromosome X, complete sequence Length = 203581 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 141964 aacaagcaaacaaacaaaaaag 141985
>emb|AL670231.7| Mouse DNA sequence from clone RP23-329G7 on chromosome 4, complete sequence Length = 229957 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggaggggta 136 ||||| |||||||||||| ||||||||||| Sbjct: 200577 aacaaacaaacaaacaaacaaggaggggta 200548
>emb|AL929375.5| Mouse DNA sequence from clone RP23-49G18 on chromosome 2, complete sequence Length = 54202 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaacaagcaaacaaacaaaaaa 127 |||||||||||||||||||||| Sbjct: 22864 gaacaagcaaacaaacaaaaaa 22885
>emb|AL731717.11| Mouse DNA sequence from clone RP23-92C4 on chromosome X, complete sequence Length = 234900 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 70722 aacaagcaaacaaacaaaaaag 70701
>emb|AL833775.7| Mouse DNA sequence from clone RP23-135L5 on chromosome 4, complete sequence Length = 194640 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggagg 132 ||||| |||||||||||||||||||| Sbjct: 151905 aacaaacaaacaaacaaaaaaggagg 151880
>dbj|AP004288.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1735D4 Length = 212373 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 134297 aacaagcaaacaaacaaaaaag 134318 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 89432 aacaagcaaacaaacaaaaaa 89412
>emb|AL732428.7| Mouse DNA sequence from clone RP23-347P2 on chromosome 2, complete sequence Length = 123627 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 7123 aacaagcaaacaaacaaaaaag 7144
>emb|AL627078.10| Mouse DNA sequence from clone RP23-138K13 on chromosome 4, complete sequence Length = 90129 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaag 128 |||||||||||||||||||||| Sbjct: 61542 aacaagcaaacaaacaaaaaag 61521
>gb|AC117731.14| Mus musculus chromosome 8, clone RP24-128L11, complete sequence Length = 171484 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 151564 aacaagcaaacaaacaaaaaa 151584
>gb|AC153080.4| Colobus guereza clone CH272-279A15, complete sequence Length = 141541 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 115062 aacaagcaaacaaacaaaaaa 115042
>gb|AC162384.6| Mus musculus 10 BAC RP24-292K6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172853 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 161993 aacaagcaaacaaacaaaaaa 162013
>gb|AC102039.8| Mus musculus chromosome 5, clone RP23-262L7, complete sequence Length = 168142 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 61888 aacaagcaaacaaacaaaaaa 61908
>gb|AC102612.14| Mus musculus chromosome 9, clone RP23-417D20, complete sequence Length = 202804 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 18994 aacaagcaaacaaacaaaaaa 19014
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 161535 aacaagcaaacaaacaaaaaa 161555
>gb|AC153380.1| Mus musculus BAC RP23-256G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160046 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 125884 aacaagcaaacaaacaaaaaa 125864
>gb|AC123629.10| Mus musculus chromosome 13, clone RP24-344N4, complete sequence Length = 177594 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 166041 aacaagcaaacaaacaaaaaa 166061
>gb|AC152753.1| Mus musculus chromosome 17 clone RP23-65L9, complete sequence Length = 211853 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaaggag 131 ||||| ||||||||||||||||||| Sbjct: 82614 aacaaacaaacaaacaaaaaaggag 82590
>gb|AC121261.9| Mus musculus chromosome 7, clone RP24-69L13, complete sequence Length = 163319 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 63147 aacaagcaaacaaacaaaaaa 63167
>gb|AC110525.10| Mus musculus chromosome 8, clone RP23-82N11, complete sequence Length = 153281 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 126434 aacaagcaaacaaacaaaaaa 126454
>gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome 16, complete sequence Length = 212628 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 188341 aacaagcaaacaaacaaaaaa 188321
>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence Length = 215980 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 164483 aacaagcaaacaaacaaaaaa 164503
>gb|AC145600.6| Mus musculus BAC clone RP24-220P24 from chromosome y, complete sequence Length = 171542 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 155190 aacaagcaaacaaacaaaaaa 155170
>gb|AC167812.4| Mus musculus BAC clone RP24-299F5 from chromosome 18, complete sequence Length = 193523 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 51168 aacaagcaaacaaacaaaaaa 51148
>ref|NM_001031595.1| Gallus gallus zinc finger protein, subfamily 1A, 5 (ZNFN1A5), mRNA Length = 5155 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 4409 aacaagcaaacaaacaaaaaa 4389
>gb|AC168308.2| Mus musculus chromosome 18, clone wi1-1401I7, complete sequence Length = 39007 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 17325 aacaagcaaacaaacaaaaaa 17305
>ref|NM_020443.2| Homo sapiens neuron navigator 1 (NAV1), mRNA Length = 11365 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 6548 aacaagcaaacaaacaaaaaa 6568
>gb|AC163447.5| Mus musculus chromosome 7, clone RP24-314E16, complete sequence Length = 135851 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 106976 aacaagcaaacaaacaaaaaa 106956
>gb|AC102794.8| Mus musculus chromosome 3, clone RP23-235G13, complete sequence Length = 166028 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 118299 aacaagcaaacaaacaaaaaa 118319 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaagga 130 ||||| |||||||||||||||||| Sbjct: 115822 aacaaacaaacaaacaaaaaagga 115799
>gb|AC107634.8| Mus musculus chromosome 5, clone RP23-19G21, complete sequence Length = 201345 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 23428 aacaagcaaacaaacaaaaaa 23448
>gb|AC113177.16| Mus musculus chromosome 15, clone RP23-447G7, complete sequence Length = 179268 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 124155 aacaagcaaacaaacaaaaaa 124135
>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence Length = 177245 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 169469 aacaagcaaacaaacaaaaaa 169489
>gb|AC102168.9| Mus musculus chromosome 7, clone RP23-452N21, complete sequence Length = 171392 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 7255 aacaagcaaacaaacaaaaaa 7235
>gb|AC158499.5| Mus musculus chromosome 18, clone RP23-466O5, complete sequence Length = 164645 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 46480 aacaagcaaacaaacaaaaaa 46460
>gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, complete sequence Length = 219244 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 130365 aacaagcaaacaaacaaaaaa 130385
>gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, complete sequence Length = 213778 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 147416 aacaagcaaacaaacaaaaaa 147436
>gb|AC146536.3| Dasypus novemcinctus clone VMRC5-215B23, complete sequence Length = 113776 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 39213 aacaagcaaacaaacaaaaaa 39233
>gb|AC005213.1| Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H120), complete sequence Length = 102431 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 94525 aacaagcaaacaaacaaaaaa 94545
>gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, complete sequence Length = 242587 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 gaacaagcaaacaaacaaaaa 126 ||||||||||||||||||||| Sbjct: 130701 gaacaagcaaacaaacaaaaa 130681
>gb|AC101715.8| Mus musculus chromosome 1, clone RP23-283P17, complete sequence Length = 148387 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 105999 aacaagcaaacaaacaaaaaa 106019
>gb|AC161262.2| Mus musculus BAC clone RP23-325G1 from chromosome 9, complete sequence Length = 204750 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 187049 aacaagcaaacaaacaaaaaa 187069
>gb|AC161416.2| Mus musculus BAC clone RP23-306A2 from chromosome 1, complete sequence Length = 196764 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 59000 aacaagcaaacaaacaaaaaa 58980
>gb|AC159635.2| Mus musculus BAC clone RP24-111I3 from chromosome 12, complete sequence Length = 168623 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 167273 aacaagcaaacaaacaaaaaa 167253
>gb|AC153977.4| Mus musculus 10 BAC RP24-270K22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163035 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 126552 aacaagcaaacaaacaaaaaa 126532
>gb|AC102654.7| Mus musculus chromosome 1, clone RP23-2K13, complete sequence Length = 245404 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 61650 aacaagcaaacaaacaaaaaa 61670
>gb|AC151571.1| Latimeria menadoensis clone VMRC4-140H19, complete sequence Length = 187392 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 56070 aacaagcaaacaaacaaaaaa 56090
>gb|AC120875.12| Mus musculus chromosome 1, clone RP23-317M5, complete sequence Length = 195159 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 55717 aacaagcaaacaaacaaaaaa 55697
>gb|AY267034.1| Mus musculus cadherin 7 precursor, mRNA, complete cds Length = 3408 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 2813 aacaagcaaacaaacaaaaaa 2793
>gb|AC124323.10| Mus musculus chromosome 19, clone RP24-444B6, complete sequence Length = 150803 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 70059 aacaagcaaacaaacaaaaaa 70039
>gb|AC137978.8| Mus musculus chromosome 1, clone RP24-468M12, complete sequence Length = 181633 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 136757 aacaagcaaacaaacaaaaaa 136737
>gb|AC113104.15| Mus musculus chromosome 18, clone RP23-321L15, complete sequence Length = 207418 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 191304 aacaagcaaacaaacaaaaaa 191284
>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence Length = 210819 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 5846 aacaagcaaacaaacaaaaaa 5826
>gb|AC117994.12| Mus musculus chromosome 6, clone RP23-25K2, complete sequence Length = 237945 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 193941 aacaagcaaacaaacaaaaaa 193921
>gb|AC091333.6| Mus musculus chromosome 7, clone RP23-325M1, complete sequence Length = 192111 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 62677 aacaagcaaacaaacaaaaaa 62657
>gb|AC117570.11| Mus musculus chromosome 9, clone RP23-18M12, complete sequence Length = 238598 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 1758 aacaagcaaacaaacaaaaaa 1738
>gb|AC102342.10| Mus musculus chromosome 18, clone RP23-250K3, complete sequence Length = 168009 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 62581 aacaagcaaacaaacaaaaaa 62601
>ref|XM_429676.1| PREDICTED: Gallus gallus LOC419550 (LOC419550), mRNA Length = 655 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 119 aacaagcaaacaaacaaaaaa 139
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 24514 aacaagcaaacaaacaaaaaa 24494
>gb|AF241726.3| Homo sapiens chromosome X, clones RP5-819E23 and RP1-137P19, Map p11.4, complete sequences Length = 244978 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 35628 aacaagcaaacaaacaaaaaa 35648
>gb|AC101983.16| Mus musculus chromosome 6, clone RP24-352A8, complete sequence Length = 153860 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 95932 aacaagcaaacaaacaaaaaa 95912
>gb|AC101794.5| Mus musculus chromosome 1, clone RP24-188N24, complete sequence Length = 136946 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 34660 aacaagcaaacaaacaaaaaa 34680
>gb|AC118047.7| Mus musculus chromosome 3, clone RP24-219P20, complete sequence Length = 159930 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 91664 aacaagcaaacaaacaaaaaa 91684
>gb|AC135672.4| Mus musculus BAC clone RP23-449K22 from chromosome 9, complete sequence Length = 162356 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 121390 aacaagcaaacaaacaaaaaa 121410
>gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome 5, complete sequence Length = 234652 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 225760 aacaagcaaacaaacaaaaaa 225740
>ref|NM_204181.1| Gallus gallus cholinergic receptor, nicotinic, alpha 7 (CHRNA7), mRNA Length = 2696 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 1591 aacaagcaaacaaacaaaaaa 1571
>gb|AC123747.26| Mus musculus chromosome 3, clone RP24-123I12, complete sequence Length = 188946 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 90331 aacaagcaaacaaacaaaaaa 90311
>gb|AC102497.7| Mus musculus chromosome 18, clone RP24-570C15, complete sequence Length = 165977 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 161927 aacaagcaaacaaacaaaaaa 161907
>gb|AC111059.9| Mus musculus chromosome 15, clone RP24-495D8, complete sequence Length = 124519 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 8842 aacaagcaaacaaacaaaaaa 8822
>gb|AC100212.8| Mus musculus chromosome 18, clone RP23-60D22, complete sequence Length = 225698 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 189836 aacaagcaaacaaacaaaaaa 189816
>gb|AC107274.11| Rattus norvegicus 18 BAC CH230-207M17 (Children's Hospital Oakland Research Institute) complete sequence Length = 217066 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 1638 aacaagcaaacaaacaaaaaa 1618
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 197131 aacaagcaaacaaacaaaaaa 197111
>gb|AC112938.11| Mus musculus chromosome 5, clone RP24-72E12, complete sequence Length = 235924 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 160207 aacaagcaaacaaacaaaaaa 160187
>gb|AC121785.3| Mus musculus BAC clone RP23-382K4 from chromosome 3, complete sequence Length = 197272 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 65707 aacaagcaaacaaacaaaaaa 65727
>gb|AC127546.4| Mus musculus BAC clone RP24-485N8 from chromosome 7, complete sequence Length = 151861 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 53135 aacaagcaaacaaacaaaaaa 53115
>gb|AC139376.3| Mus musculus BAC clone RP24-420A20 from chromosome 10, complete sequence Length = 184039 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 110468 aacaagcaaacaaacaaaaaa 110448
>gb|AC127572.3| Mus musculus BAC clone RP24-231A11 from chromosome Y, complete sequence Length = 134145 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aacaagcaaacaaacaaaaaa 127 ||||||||||||||||||||| Sbjct: 61308 aacaagcaaacaaacaaaaaa 61328 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,008,426 Number of Sequences: 3902068 Number of extensions: 4008426 Number of successful extensions: 554593 Number of sequences better than 10.0: 1906 Number of HSP's better than 10.0 without gapping: 1900 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 530781 Number of HSP's gapped (non-prelim): 23811 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
