>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 108/129 (83%)
 Strand = Plus / Plus

                                                                           
Query: 321     cgccattcttctgaaaacagcaatctgggaagcataaccaggttcgtcgctcgagccgcc 380
               ||||||||||||||| ||||| |||||||||||  | || ||||| ||||  || |||||
Sbjct: 3461920 cgccattcttctgaagacagcgatctgggaagcgaagcctggttcatcgcctgatccgcc 3461979

                                                                           
Query: 381     aacaccactgaactccacactgtagttgtggcttgcagcgaggccagtagcccaccgctg 440
               ||| ||||||||||| || |||||||||||  || | ||||| || ||||||||  ||||
Sbjct: 3461980 aacgccactgaactcgacgctgtagttgtgcttttctgcgagtccggtagcccagtgctg 3462039

                        
Query: 441     gaactggga 449
               |||||||||
Sbjct: 3462040 gaactggga 3462048



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 241     gatgcgttaggccattcccagagaacttcataaggttgatgc 282
               ||||| || ||||||||||||||||  |||||||||||||||
Sbjct: 3461843 gatgcatttggccattcccagagaagctcataaggttgatgc 3461884

>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0428D12
          Length = 141678

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 108/129 (83%)
 Strand = Plus / Plus

                                                                          
Query: 321    cgccattcttctgaaaacagcaatctgggaagcataaccaggttcgtcgctcgagccgcc 380
              ||||||||||||||| ||||| |||||||||||  | || ||||| ||||  || |||||
Sbjct: 101740 cgccattcttctgaagacagcgatctgggaagcgaagcctggttcatcgcctgatccgcc 101799

                                                                          
Query: 381    aacaccactgaactccacactgtagttgtggcttgcagcgaggccagtagcccaccgctg 440
              ||| ||||||||||| || |||||||||||  || | ||||| || ||||||||  ||||
Sbjct: 101800 aacgccactgaactcgacgctgtagttgtgcttttctgcgagtccggtagcccagtgctg 101859

                       
Query: 441    gaactggga 449
              |||||||||
Sbjct: 101860 gaactggga 101868



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 241    gatgcgttaggccattcccagagaacttcataaggttgatgc 282
              ||||| || ||||||||||||||||  |||||||||||||||
Sbjct: 101663 gatgcatttggccattcccagagaagctcataaggttgatgc 101704

>dbj|AK111609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102N10, full
            insert sequence
          Length = 3167

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 108/129 (83%)
 Strand = Plus / Minus

                                                                        
Query: 321  cgccattcttctgaaaacagcaatctgggaagcataaccaggttcgtcgctcgagccgcc 380
            ||||||||||||||| ||||| |||||||||||  | || ||||| ||||  || |||||
Sbjct: 2881 cgccattcttctgaagacagcgatctgggaagcgaagcctggttcatcgcctgatccgcc 2822

                                                                        
Query: 381  aacaccactgaactccacactgtagttgtggcttgcagcgaggccagtagcccaccgctg 440
            ||| ||||||||||| || |||||||||||  || | ||||| || ||||||||  ||||
Sbjct: 2821 aacgccactgaactcgacgctgtagttgtgcttttctgcgagtccggtagcccagtgctg 2762

                     
Query: 441  gaactggga 449
            |||||||||
Sbjct: 2761 gaactggga 2753



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 241  gatgcgttaggccattcccagagaacttcataaggttgatgc 282
            ||||| || ||||||||||||||||  |||||||||||||||
Sbjct: 2958 gatgcatttggccattcccagagaagctcataaggttgatgc 2917

>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007,
             complete sequence
          Length = 92741

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 379   ccaacaccactgaactccacactgtagttgtg 410
             ||||| |||||||||||||||||||| |||||
Sbjct: 15912 ccaaccccactgaactccacactgtaattgtg 15943

>gb|AY105677.1| Zea mays PCO139619 mRNA sequence
          Length = 545

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 327 tcttctgaaaacagcaatctgggaagc 353
           ||||||||||||||| |||||||||||
Sbjct: 498 tcttctgaaaacagcgatctgggaagc 472



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 418 gcgaggccagtagcccaccgctggaactg 446
           ||||||||||||||||| | |||||||||
Sbjct: 407 gcgaggccagtagcccagcactggaactg 379

>emb|X14603.1|NCQA Neurospora crassa qa gene cluster
          Length = 18120

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 161  aagaaccagtctcatcatctc 181
            |||||||||||||||||||||
Sbjct: 5134 aagaaccagtctcatcatctc 5114

>gb|AC093637.5| Homo sapiens BAC clone RP11-239C17 from 4, complete sequence
          Length = 111211

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 320  tcgccattcttctgaaaacag 340
            |||||||||||||||||||||
Sbjct: 8528 tcgccattcttctgaaaacag 8508

>gb|AC092581.2| Homo sapiens BAC clone RP11-16I14 from 4, complete sequence
          Length = 162075

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 382   acaccactgaactccacactg 402
             |||||||||||||||||||||
Sbjct: 78385 acaccactgaactccacactg 78405

>gb|M10139.1|NEUQA4 N.crassa qa-4 gene encoding 3-dehydroshikimate dehydratase, complete
            cds
          Length = 2596

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 161  aagaaccagtctcatcatctc 181
            |||||||||||||||||||||
Sbjct: 1035 aagaaccagtctcatcatctc 1055

>emb|AL357974.16| Human DNA sequence from clone RP11-398M15 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 93165

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   gatgcgttaggccattccca 260
             ||||||||||||||||||||
Sbjct: 58523 gatgcgttaggccattccca 58542

>emb|AL845255.2| Mouse DNA sequence from clone RP23-298K19 on chromosome 4 Contains a K+
              channel tetramerisation domain protein pseudogene and a
              novel gene, complete sequence
          Length = 199040

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 139    actatcaaactgacaagttagtaa 162
              ||||||| ||||||||||||||||
Sbjct: 178236 actatcatactgacaagttagtaa 178259

>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    ccagagaacttcataaggtt 277
              ||||||||||||||||||||
Sbjct: 413634 ccagagaacttcataaggtt 413615


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,903,372
Number of Sequences: 3902068
Number of extensions: 2903372
Number of successful extensions: 50975
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50944
Number of HSP's gapped (non-prelim): 31
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)