ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl02f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009374.1| Triticum aestivum clone wlm96.pk029.g10:fis, full... 331 1e-87
2dbj|AK059666.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
3gb|AY110231.1| Zea mays CL852_1 mRNA sequence 50 0.006
4ref|NM_125737.3| Arabidopsis thaliana EMB2746; catalytic AT5G634... 46 0.089
5dbj|AK221272.1| Arabidopsis thaliana mRNA for putative protein, ... 46 0.089
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
7gb|BT004210.1| Arabidopsis thaliana clone RAFL16-01-C03 (R50172)... 46 0.089
8dbj|AK176547.1| Arabidopsis thaliana mRNA for putative protein, ... 46 0.089
9dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
10gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, comp... 42 1.4
11emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in ... 42 1.4
12gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell... 42 1.4
13gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76... 42 1.4
14gb|AC005740.1| Homo sapiens chromosome 5p, BAC clone 50g21 (LBNL... 40 5.5
15gb|AC124993.19| Mus musculus chromosome 15, clone RP23-150J21, c... 40 5.5
16ref|XM_460729.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 5.5
17gb|AF165424.6| Homo sapiens chromosome 8 clone CTB-402F2 map q21... 40 5.5
18gb|AC122185.4| Mus musculus BAC clone RP23-18J13 from chromosome... 40 5.5
19gb|AF091137.1| Trichosurus vulpecula polymeric-immunoglobulin re... 40 5.5
20ref|XM_665916.1| Plasmodium berghei strain ANKA hypothetical pro... 40 5.5
21gb|AC136712.9| Mus musculus chromosome 3, clone RP23-36H15, comp... 40 5.5
22emb|AL356486.12| Human DNA sequence from clone RP11-721F14 on ch... 40 5.5
23emb|AL034345.3|HS207H1 Human DNA sequence from clone RP1-207H1 o... 40 5.5
24emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 40 5.5
25gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, com... 40 5.5
26gb|AC103760.2| Homo sapiens chromosome 8, clone CTD-2284J15, com... 40 5.5
27gb|AC022402.5| Homo sapiens chromosome 06 clone RP11-70I3, compl... 40 5.5
28gb|AC098933.2| Homo sapiens chromosome 1 clone RP11-417N7, compl... 40 5.5
29gb|AC011366.6| Homo sapiens chromosome 5 clone CTC-568L21, compl... 40 5.5
30gb|AC018711.4| Homo sapiens BAC clone RP11-324K4 from 1, complet... 40 5.5
31gb|AC092272.2| Homo sapiens chromosome 5 clone CTC-339E17, compl... 40 5.5
32gb|AY014830.1| Mus musculus lysyl hydroxylase 3 (Plod3) gene, co... 40 5.5
33gb|AC093422.3| Homo sapiens chromosome 1 clone RP11-383G10, comp... 40 5.5
34emb|BX465866.13| Mouse DNA sequence from clone RP23-128L16 on ch... 40 5.5
35gb|AC026756.15|AC026756 Homo sapiens chromosome 13 clone RP11-28... 40 5.5
36gb|AC008844.5|AC008844 Homo sapiens chromosome 5 clone CTD-2157L... 40 5.5
37emb|BX548065.6| Mouse DNA sequence from clone RP23-163B21 on chr... 40 5.5
38gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complet... 40 5.5
39gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complet... 40 5.5
40emb|AJ879075.1| Uncultured bacterium adh gene, ORF1, ORF2 and ORF3 40 5.5
41dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 5.5 
>gb|BT009374.1| Triticum aestivum clone wlm96.pk029.g10:fis, full insert mRNA
            sequence
          Length = 1635

 Score =  331 bits (167), Expect = 1e-87
 Identities = 328/380 (86%), Gaps = 20/380 (5%)
 Strand = Plus / Minus

                                                                        
Query: 47   taatgttccaacagaactgactaatcaattgttagatctagtt---------acaaaaac 97
            ||||||| ||||  ||||||||||||||||| |||||||||||         ||||||||
Sbjct: 1490 taatgttgcaacttaactgactaatcaattgatagatctagttgctgatcccacaaaaac 1431

                                                                        
Query: 98   taacacaacaacatggtagactggtaaacctagtttcacttaactaccccaggcatctca 157
            |||    |||||||||| || |||||||||||||||||||||||||||||| ||||||||
Sbjct: 1430 taa---tacaacatggtggattggtaaacctagtttcacttaactaccccaagcatctca 1374

                                                                        
Query: 158  tgcaatggcaaagaatgatacgaagcgattacttcct---gaggctactgatcttgtcat 214
            ||||||||||||||||||   ||   |||||||||||   ||||||  |||||||||| |
Sbjct: 1373 tgcaatggcaaagaatgacgtgataggattacttcctggagaggctgttgatcttgtcgt 1314

                                                                        
Query: 215  tgattcacgggctaccttacaatatgctgatctccaaattactatcgctaagc----tat 270
             ||||||||||||||| |||||||  ||||||||||||| |||||||||||||    |||
Sbjct: 1313 cgattcacgggctacc-tacaatacactgatctccaaataactatcgctaagcaatttat 1255

                                                                        
Query: 271  tacgggtctgtttcatttggttgccatttccccttcgcatgataaaaaaccatccatggc 330
            ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1254 tacagatctgtttcatttggttgccatttccccttcgcatgataaaaaactatccatggc 1195

                                                                        
Query: 331  taaaaaataaggccatgtttgcatgctttcgccatccttcttgctctcctcgtatttctg 390
              |||||||  ||||||| |||||| ||||  ||||||||||||||||||||||||||||
Sbjct: 1194 cgaaaaatattgccatgtctgcatgttttcttcatccttcttgctctcctcgtatttctg 1135

                                
Query: 391  aagcaatgatgtccacacag 410
            ||||||||||||||||||||
Sbjct: 1134 aagcaatgatgtccacacag 1115
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>dbj|AK059666.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F01, full
           insert sequence
          Length = 1335

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                       
Query: 283 tcatttggttgccatttccccttcgcatgataaaaaaccatccatggctaaaaaataagg 342
           ||||| ||||||||||||||||| || ||||||||  |  |||||| | || ||||| ||
Sbjct: 995 tcattgggttgccatttccccttggcttgataaaaccctgtccatgtccaagaaatacgg 936

                                                                       
Query: 343 ccatgtttgcatgctttcgccatccttcttgctctcctcgtatttctgaagcaatgatgt 402
           ||| || |  | ||||||  |||| |||||||||||||| |||||||||| |||||||||
Sbjct: 935 ccacgtctttacgctttcctcatctttcttgctctcctcatatttctgaaccaatgatgt 876

              
Query: 403 cca 405
           |||
Sbjct: 875 cca 873
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>gb|AY110231.1| Zea mays CL852_1 mRNA sequence
          Length = 1931

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 365  tccttcttgctctcctcgtatttctgaagcaatgatgtcca 405
            ||||||||||| ||||||||||||||||  || ||||||||
Sbjct: 1648 tccttcttgctttcctcgtatttctgaactaacgatgtcca 1608



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tttggttgccatttcccctt 305
            ||||||||||||||||||||
Sbjct: 1727 tttggttgccatttcccctt 1708
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>ref|NM_125737.3| Arabidopsis thaliana EMB2746; catalytic AT5G63420 (EMB2746) mRNA,
            complete cds
          Length = 3026

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 370  cttgctctcctcgtatttctgaa 392
            |||||||||||||||||||||||
Sbjct: 2781 cttgctctcctcgtatttctgaa 2759
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>dbj|AK221272.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone:
            RAFL24-15-P14
          Length = 3036

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 370  cttgctctcctcgtatttctgaa 392
            |||||||||||||||||||||||
Sbjct: 2781 cttgctctcctcgtatttctgaa 2759
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 283      tcatttggttgccatttccccttcgcatgataaaa 317
                ||||| ||||||||||||||||| || ||||||||
Sbjct: 20032905 tcattgggttgccatttccccttggcttgataaaa 20032871



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 378      cctcgtatttctgaagcaatgatgtcca 405
                |||| |||||||||| ||||||||||||
Sbjct: 20032474 cctcatatttctgaaccaatgatgtcca 20032447
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>gb|BT004210.1| Arabidopsis thaliana clone RAFL16-01-C03 (R50172) unknown protein
            (At5g63420) mRNA, complete cds
          Length = 3042

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 370  cttgctctcctcgtatttctgaa 392
            |||||||||||||||||||||||
Sbjct: 2781 cttgctctcctcgtatttctgaa 2759
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>dbj|AK176547.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone:
            RAFL25-06-L06
          Length = 2942

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 370  cttgctctcctcgtatttctgaa 392
            |||||||||||||||||||||||
Sbjct: 2742 cttgctctcctcgtatttctgaa 2720
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>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0014M17
          Length = 156778

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 283    tcatttggttgccatttccccttcgcatgataaaa 317
              ||||| ||||||||||||||||| || ||||||||
Sbjct: 137026 tcattgggttgccatttccccttggcttgataaaa 136992



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 378    cctcgtatttctgaagcaatgatgtcca 405
              |||| |||||||||| ||||||||||||
Sbjct: 136595 cctcatatttctgaaccaatgatgtcca 136568
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>gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, complete sequence
          Length = 206029

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 281   tttcatttggttgccatttcc 301
             |||||||||||||||||||||
Sbjct: 44174 tttcatttggttgccatttcc 44154
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>emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in linkage group 9, complete
              sequence
          Length = 243063

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 303    cttcgcatgataaaaaaccatccat 327
              ||||||||||||||||| |||||||
Sbjct: 206585 cttcgcatgataaaaaaacatccat 206561
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>gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell Park Cancer Institute
              Drosophila BAC library) complete sequence
          Length = 169138

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     ttacaaaaactaacacaacaa 108
              |||||||||||||||||||||
Sbjct: 117354 ttacaaaaactaacacaacaa 117334
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>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete
              sequence
          Length = 294272

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     ttacaaaaactaacacaacaa 108
              |||||||||||||||||||||
Sbjct: 185073 ttacaaaaactaacacaacaa 185053
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>gb|AC005740.1| Homo sapiens chromosome 5p, BAC clone 50g21 (LBNL H154), complete
              sequence
          Length = 186780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 281    tttcatttggttgccatttcccct 304
              |||||||||||| |||||||||||
Sbjct: 163636 tttcatttggtttccatttcccct 163659
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>gb|AC124993.19| Mus musculus chromosome 15, clone RP23-150J21, complete sequence
          Length = 214304

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    cttaactaccccaggcatct 155
              ||||||||||||||||||||
Sbjct: 185093 cttaactaccccaggcatct 185074
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>ref|XM_460729.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F09350g)
            partial mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   actaatcaattgttagatct 85
            ||||||||||||||||||||
Sbjct: 1456 actaatcaattgttagatct 1475
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>gb|AF165424.6| Homo sapiens chromosome 8 clone CTB-402F2 map q21.3, complete sequence
          Length = 111736

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 295   catttccccttcgcatgataaaaa 318
             ||||||||||| ||||||||||||
Sbjct: 69141 catttccccttggcatgataaaaa 69118
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>gb|AC122185.4| Mus musculus BAC clone RP23-18J13 from chromosome 15, complete sequence
          Length = 202485

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 85     tagttacaaaaactaacacaacaacatg 112
              |||| ||||||||||| |||||||||||
Sbjct: 175482 tagtaacaaaaactaagacaacaacatg 175455
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>gb|AF091137.1| Trichosurus vulpecula polymeric-immunoglobulin receptor precursor
           (PIGR) mRNA, complete cds
          Length = 2848

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 gctttcgccatccttcttgc 374
           ||||||||||||||||||||
Sbjct: 661 gctttcgccatccttcttgc 642
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>ref|XM_665916.1| Plasmodium berghei strain ANKA hypothetical protein (PB401420.00.0)
           partial mRNA
          Length = 597

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 atggcaaagaatgatacgaa 181
           ||||||||||||||||||||
Sbjct: 1   atggcaaagaatgatacgaa 20
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>gb|AC136712.9| Mus musculus chromosome 3, clone RP23-36H15, complete sequence
          Length = 201139

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    taaaaaataaggccatgttt 350
              ||||||||||||||||||||
Sbjct: 151329 taaaaaataaggccatgttt 151310
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>emb|AL356486.12| Human DNA sequence from clone RP11-721F14 on chromosome 13 Contains the
             GPR80 gene for G protein-coupled receptor 80, complete
             sequence
          Length = 67645

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   gccatccttcttgctctcct 380
             ||||||||||||||||||||
Sbjct: 18411 gccatccttcttgctctcct 18392
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>emb|AL034345.3|HS207H1 Human DNA sequence from clone RP1-207H1 on chromosome 6p21.1-21.31
            Contains part of the DNAH8 gene for dynein axonemal heavy
            polypeptide 8, the 3' part of a novel gene and a 40S
            ribosomal protein S2 (RPS2) pseudogene, complete sequence
          Length = 84756

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   tctagttacaaaaactaaca 102
            ||||||||||||||||||||
Sbjct: 7335 tctagttacaaaaactaaca 7354
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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     actaatcaattgttagatct 85
              ||||||||||||||||||||
Sbjct: 741539 actaatcaattgttagatct 741520
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>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence
          Length = 195633

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    aaggccatgtttgcatgctt 358
              ||||||||||||||||||||
Sbjct: 191133 aaggccatgtttgcatgctt 191114
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>gb|AC103760.2| Homo sapiens chromosome 8, clone CTD-2284J15, complete sequence
          Length = 112655

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   catttccccttcgcatgataaaaa 318
             ||||||||||| ||||||||||||
Sbjct: 54013 catttccccttggcatgataaaaa 54036
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>gb|AC022402.5| Homo sapiens chromosome 06 clone RP11-70I3, complete sequence
          Length = 164270

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tctagttacaaaaactaaca 102
              ||||||||||||||||||||
Sbjct: 113199 tctagttacaaaaactaaca 113218
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>gb|AC098933.2| Homo sapiens chromosome 1 clone RP11-417N7, complete sequence
          Length = 179414

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ttggttgccatttccccttc 306
             ||||||||||||||||||||
Sbjct: 10473 ttggttgccatttccccttc 10492
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>gb|AC011366.6| Homo sapiens chromosome 5 clone CTC-568L21, complete sequence
          Length = 177954

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   aataaggccatgtttgcatg 355
             ||||||||||||||||||||
Sbjct: 27711 aataaggccatgtttgcatg 27692
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>gb|AC018711.4| Homo sapiens BAC clone RP11-324K4 from 1, complete sequence
          Length = 167334

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ttggttgccatttccccttc 306
             ||||||||||||||||||||
Sbjct: 47475 ttggttgccatttccccttc 47456
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>gb|AC092272.2| Homo sapiens chromosome 5 clone CTC-339E17, complete sequence
          Length = 145668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    aataaggccatgtttgcatg 355
              ||||||||||||||||||||
Sbjct: 134993 aataaggccatgtttgcatg 134974
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>gb|AY014830.1| Mus musculus lysyl hydroxylase 3 (Plod3) gene, complete cds
          Length = 15549

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  ttggttgccatttccccttc 306
            ||||||||||||||||||||
Sbjct: 2373 ttggttgccatttccccttc 2354
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>gb|AC093422.3| Homo sapiens chromosome 1 clone RP11-383G10, complete sequence
          Length = 180872

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    ttggttgccatttccccttc 306
              ||||||||||||||||||||
Sbjct: 140486 ttggttgccatttccccttc 140505
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>emb|BX465866.13| Mouse DNA sequence from clone RP23-128L16 on chromosome X, complete
            sequence
          Length = 62496

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  ccttacaatatgctgatctc 248
            ||||||||||||||||||||
Sbjct: 1147 ccttacaatatgctgatctc 1166
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>gb|AC026756.15|AC026756 Homo sapiens chromosome 13 clone RP11-286P8, complete sequence
          Length = 156555

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    gccatccttcttgctctcct 380
              ||||||||||||||||||||
Sbjct: 126868 gccatccttcttgctctcct 126887
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>gb|AC008844.5|AC008844 Homo sapiens chromosome 5 clone CTD-2157L4, complete sequence
          Length = 113759

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   aataaggccatgtttgcatg 355
             ||||||||||||||||||||
Sbjct: 36611 aataaggccatgtttgcatg 36592
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>emb|BX548065.6| Mouse DNA sequence from clone RP23-163B21 on chromosome X, complete
              sequence
          Length = 225082

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    ccttacaatatgctgatctc 248
              ||||||||||||||||||||
Sbjct: 224229 ccttacaatatgctgatctc 224248
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>gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complete sequence
          Length = 195371

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    ttggttgccatttccccttc 306
              ||||||||||||||||||||
Sbjct: 174128 ttggttgccatttccccttc 174109
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>gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complete sequence
          Length = 177652

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    ttggttgccatttccccttc 306
              ||||||||||||||||||||
Sbjct: 158452 ttggttgccatttccccttc 158471
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>emb|AJ879075.1| Uncultured bacterium adh gene, ORF1, ORF2 and ORF3
          Length = 5163

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 aaagaatgatacgaagcgat 186
           ||||||||||||||||||||
Sbjct: 541 aaagaatgatacgaagcgat 560
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>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7
          Length = 239057

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    taaaaaataaggccatgttt 350
              ||||||||||||||||||||
Sbjct: 119307 taaaaaataaggccatgttt 119288


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,605,662
Number of Sequences: 3902068
Number of extensions: 3605662
Number of successful extensions: 59069
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58966
Number of HSP's gapped (non-prelim): 100
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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