Clone Name | rbastl02f04 |
---|---|
Clone Library Name | barley_pub |
>ASPM_FELCA (P62288) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3461 Score = 33.1 bits (74), Expect = 0.33 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +3 Query: 150 YNIRRQNKRW-IMNQ*RELIQLYISINNSGRLRMHTHCR*NLSTKALALFIQSQIRSTNL 326 Y + Q K+W IM + LIQ+Y GR + + L TKA + IQS RS + Sbjct: 1982 YRMHVQQKKWDIMKKAARLIQMYYRAYRIGRRQRQLY----LKTKAAIVIIQSAYRSMRV 2037 Query: 327 TTQLSE 344 ++ E Sbjct: 2038 RKKIKE 2043
>E2AK3_RAT (Q9Z1Z1) Eukaryotic translation initiation factor 2-alpha kinase 3| precursor (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase) Length = 1108 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/67 (28%), Positives = 31/67 (46%) Frame = -3 Query: 451 SRRTPNRLPPAPPRY*SC*LVSMIYYYVFLLGTRSVSDNWVVRLVERI*DWMNRASALVE 272 +R T +RL P+ P+ +Y Y+ + R E + DWMNR ++ + Sbjct: 860 TRNTVDRLQPSSPK---------VYLYIQMQLCRK----------ENLKDWMNRRCSMED 900 Query: 271 RFHRQCV 251 R HR C+ Sbjct: 901 REHRVCL 907
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/65 (26%), Positives = 27/65 (41%) Frame = +1 Query: 259 VDETSRPRRSLYSSNLKSAPPISPPNYQKQSVCLARIHNNKSWILISTTSISVALAATDL 438 V+E S L SS+ + P P N + +H N+ L+ +S ++ DL Sbjct: 134 VEECSNAANLLSSSSSRGDIPCIPKNQEPTDAKALNVHENE---LLKDNKVSKQISKDDL 190 Query: 439 ACVGC 453 C C Sbjct: 191 LCSAC 195
>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)| (Dynamin-like protein 3) Length = 920 Score = 29.3 bits (64), Expect = 4.8 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -3 Query: 448 RRTPNRLPPAPPR 410 R TPNRLPPAPP+ Sbjct: 901 RTTPNRLPPAPPQ 913
>FTR_METFE (Q49168) Formylmethanofuran--tetrahydromethanopterin| formyltransferase (EC 2.3.1.101) (H4MPT formyltransferase) Length = 297 Score = 28.9 bits (63), Expect = 6.3 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +2 Query: 128 ERPQKTLIQHQASK*KMDHEPIERIDSTI 214 +RP T+I SK K+DHE +ER+ TI Sbjct: 68 QRPGFTIIICNPSKKKLDHELLERVGMTI 96
>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)| (Dynamin-like protein 6) Length = 914 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = -3 Query: 448 RRTPNRLPPAPP 413 R TPNRLPPAPP Sbjct: 895 RTTPNRLPPAPP 906
>Y4KS_RHISN (P55537) Hypothetical 33.2 kDa protein y4kS| Length = 301 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -1 Query: 180 SIFYFDA*CCISVFWGLSWVTL 115 SI Y + CC+S+ WGL TL Sbjct: 166 SIAYANVFCCLSLLWGLDMATL 187
>Y2150_BRAJA (Q45222) Hypothetical protein blr2150 (ORF8)| Length = 300 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -1 Query: 180 SIFYFDA*CCISVFWGLSWVTL 115 SI Y + CC+S+ WGL TL Sbjct: 165 SIAYANVFCCLSLLWGLDMATL 186 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,068,274 Number of Sequences: 219361 Number of extensions: 1310548 Number of successful extensions: 2796 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2796 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)