Clone Name | rbastl02e12 |
---|---|
Clone Library Name | barley_pub |
>SUBL_ARATH (O65351) Subtilisin-like protease precursor (EC 3.4.21.-)| (Cucumisin-like serine protease) Length = 757 Score = 33.5 bits (75), Expect = 0.22 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%) Frame = -1 Query: 414 TRTVTNIASDENYTVSCNAPY-GVAVSTAPAQF-FIPSGQKQ--LVTFIVNATMSNSFAS 247 TRTVT++ Y+V + GV +S PA F + +K+ VTF V+++ + S Sbjct: 676 TRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSSKPSGSNS 735 Query: 246 FGDVEFYGDRGHRVVIPFTV 187 FG +E + D H V P + Sbjct: 736 FGSIE-WSDGKHVVGSPVAI 754
>PLSC_YEAST (P33333) Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase| (EC 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT) Length = 303 Score = 29.3 bits (64), Expect = 4.2 Identities = 17/63 (26%), Positives = 27/63 (42%) Frame = +1 Query: 52 GRHASKMYTKQTQLGKSWSFYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIE 231 G A K+ + K + I+ T+P A + + H ++K + PVP V I Sbjct: 228 GEFAEKVRDQMVDTLKEIGYSPAINDTTLPPQAIEYAALQHDKKVNKKIKNEPVPSVSIS 287 Query: 232 LDV 240 DV Sbjct: 288 NDV 290
>YT32_STRFR (P20185) Hypothetical 32.6 kDa protein in transposon Tn4556| Length = 305 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -3 Query: 307 RAEAARDIHRECHHE*LFCELRGRRVLWGQGAPGG 203 R AAR H+ CH L R R LW G GG Sbjct: 245 RRAAARVRHQRCHRAGLRSPPRTREPLWSLGPSGG 279
>TAF4_DROME (P47825) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 110 kDa subunit) (p110) (TAFII-110) (110 kDa TBP-associated factor) Length = 921 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = -1 Query: 420 TITRTVTNIASDENYTVSCNAP--YGVAVSTAPAQFFIPSGQKQLVTFIVNATMSNSFAS 247 T+T+T+TN +++ N T + N P + + T PA + + IVN+ S+ +A+ Sbjct: 172 TVTQTITNTSNNSNTTSTTNHPTTTQIRLQTVPAAASM-TNTTATSNIIVNSVASSGYAN 230
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = +1 Query: 106 SFYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIELDVP 243 S +L++ + A + T+HS H DDH V + DVP Sbjct: 131 SLFLELVSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVP 176
>ADHA_CLOAB (Q04944) NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) (BDH| I) Length = 389 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +1 Query: 142 ASAFQLSGTLHSLGHDRKWDDHPV 213 AS+ ++G L SLG DRKW HP+ Sbjct: 247 ASSLAINGLL-SLGKDRKWSCHPM 269 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,090,873 Number of Sequences: 219361 Number of extensions: 1161047 Number of successful extensions: 3364 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3294 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3364 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)