>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7)|
            (Alanine--tRNA ligase) (AlaRS)
          Length = 1003

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -2

Query: 393  VLDWLTPSIAPXXXXXXXXXXXXXXXXGSDASRVKEAMELATQIASMKLS 244
            V +WLT ++ P                G+DAS+V+ A+++A+  ASMKL+
Sbjct: 954  VTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASMKLN 1003

>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
 Frame = -1

Query: 397 QGVGLAYTFNRTTQGKRRRRQEWSCPGP-------GK*CFSGQGGNGACY 269
           +G G   + +R  Q  RRR Q  SC G        G  C    GG+G C+
Sbjct: 63  EGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112

>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (CaVT.3)
          Length = 2201

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = -1

Query: 226 SSYILTGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 47
           S +++  CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 384 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 440

Query: 46  CYI*R 32
           C+I R
Sbjct: 441 CHILR 445

>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (Ca(v)3.3)
          Length = 2223

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = -1

Query: 226 SSYILTGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 47
           S +++  CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 386 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 442

Query: 46  CYI*R 32
           C+I R
Sbjct: 443 CHILR 447

>K0286_MOUSE (Q6ZQE4) Protein KIAA0286|
          Length = 437

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = -1

Query: 331 WSCPGPGK*CFSGQGGNGACYPDSFDEAELIC*DWSSYILTGCLMVVLTLLSQIVMREHK 152
           WS  GPG  C+   GG GA               W   ++ GC++     ++ ++++E +
Sbjct: 10  WSAVGPGPRCWGAGGGGGA--------------TWLLLVVAGCVVCGSADVNVVMLQESQ 55

Query: 151 I 149
           +
Sbjct: 56  V 56

>POLG_HCVEU (O39927) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3017

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/20 (50%), Positives = 17/20 (85%)
 Frame = -3

Query: 71  LQFGLSNGVLYLTNECNNST 12
           L +G S+G+ +LTN+C+NS+
Sbjct: 191 LTYGNSSGLYHLTNDCSNSS 210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,908,024
Number of Sequences: 219361
Number of extensions: 1087091
Number of successful extensions: 2203
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2202
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)