ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl02e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464852.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-04
2ref|XM_506764.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 3e-04
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
4gb|AF139211.2| Oryza sativa pre-mRNA splicing factor mRNA, compl... 54 3e-04
5dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
6dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
7dbj|AK099051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
8dbj|AK062577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
9dbj|AB110200.1| Oryza sativa (japonica cultivar-group) mRNA for ... 50 0.005
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
11dbj|AK065531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.005
13emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396... 50 0.005
14gb|BT016700.1| Zea mays clone Contig533 mRNA sequence 48 0.018
15gb|AY105970.1| Zea mays PCO109569 mRNA sequence 48 0.018
16ref|XM_657747.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.28
17gb|AC102240.12| Mus musculus chromosome 18, clone RP24-122C12, c... 42 1.1
18gb|AC157910.4| Mus musculus chromosome 18, clone RP24-372A6, com... 42 1.1
19gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's H... 42 1.1
20gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Ho... 42 1.1
21emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4,... 42 1.1
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
23gb|AY190949.1| Drosophila pseudoobscura clone DPSF01_8_J08 (D142... 42 1.1
24emb|CT027572.9| Zebrafish DNA sequence from clone CH73-52E5 in l... 42 1.1
25gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cance... 40 4.4
26gb|AC007548.10| Drosophila melanogaster clone BACR48M17, complet... 40 4.4
27gb|AC018631.3| Drosophila melanogaster clone BACR03I06, complete... 40 4.4
28gb|AC010211.10| Drosophila melanogaster clone BACR26C09, complet... 40 4.4
29gb|AC124360.5| Mus musculus BAC clone RP24-502M22 from chromosom... 40 4.4
30emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chro... 40 4.4
31emb|BX571697.3| Zebrafish DNA sequence from clone DKEY-201M8 in ... 40 4.4
32gb|AC092190.1|AC092190 Drosophila melanogaster, chromosome X, re... 40 4.4
33gb|AC133961.3| Homo sapiens BAC clone RP13-494C23 from 4, comple... 40 4.4
34gb|AC009316.3| Homo sapiens BAC clone RP11-562F14 from 2, comple... 40 4.4
35gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 ... 40 4.4
36gb|AE003574.6| Drosophila melanogaster chromosome X, section 73 ... 40 4.4
37gb|AE002665.5| Drosophila melanogaster chromosome 3L, section 83... 40 4.4
38dbj|AP000929.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.4
39dbj|AP003781.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.4
40gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 ... 40 4.4
41emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on ch... 40 4.4
42gb|CP000211.1| Drosophila melanogaster genomic scaffold 21100002... 40 4.4
43gb|CP000192.1| Drosophila melanogaster genomic scaffold 21100002... 40 4.4
44emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ... 40 4.4
45gb|AC171730.1| Lycopersicon esculentum chromosome 01 clone C01HB... 40 4.4 
>ref|XM_464852.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1176

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 284 gacctggagcgggatccagggggcgaccctgaggatggcctgg 326
           ||||||||||||||||| || ||||| ||||||||| ||||||
Sbjct: 893 gacctggagcgggatcctggaggcgatcctgaggattgcctgg 851
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>ref|XM_506764.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1113_G05.32
           mRNA
          Length = 1265

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 284 gacctggagcgggatccagggggcgaccctgaggatggcctgg 326
           ||||||||||||||||| || ||||| ||||||||| ||||||
Sbjct: 892 gacctggagcgggatcctggaggcgatcctgaggattgcctgg 850
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 284     gacctggagcgggatccagggggcgaccctgaggatggcctgg 326
               ||||||||||||||||| || ||||| ||||||||| ||||||
Sbjct: 8553331 gacctggagcgggatcctggaggcgatcctgaggattgcctgg 8553373
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>gb|AF139211.2| Oryza sativa pre-mRNA splicing factor mRNA, complete cds
          Length = 1190

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 284 gacctggagcgggatccagggggcgaccctgaggatggcctgg 326
           ||||||||||||||||| || ||||| ||||||||| ||||||
Sbjct: 893 gacctggagcgggatcctggaggcgatcctgaggattgcctgg 851
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>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0009N02
          Length = 121142

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 284   gacctggagcgggatccagggggcgaccctgaggatggcctgg 326
             ||||||||||||||||| || ||||| ||||||||| ||||||
Sbjct: 22654 gacctggagcgggatcctggaggcgatcctgaggattgcctgg 22696
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>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1113_G05
          Length = 131445

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 284    gacctggagcgggatccagggggcgaccctgaggatggcctgg 326
              ||||||||||||||||| || ||||| ||||||||| ||||||
Sbjct: 102601 gacctggagcgggatcctggaggcgatcctgaggattgcctgg 102643
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>dbj|AK099051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151F04, full
           insert sequence
          Length = 1177

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 284 gacctggagcgggatccagggggcgaccctgaggatggcctgg 326
           ||||||||||||||||| || ||||| ||||||||| ||||||
Sbjct: 893 gacctggagcgggatcctggaggcgatcctgaggattgcctgg 851
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>dbj|AK062577.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D09, full
           insert sequence
          Length = 1265

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 284 gacctggagcgggatccagggggcgaccctgaggatggcctgg 326
           ||||||||||||||||| || ||||| ||||||||| ||||||
Sbjct: 892 gacctggagcgggatcctggaggcgatcctgaggattgcctgg 850
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>dbj|AB110200.1| Oryza sativa (japonica cultivar-group) mRNA for pre-mRNA splicing
           factor, partial cds, clone: pNS-C4A21
          Length = 1003

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 278 tcgggggacctggagcgggatccagggggcgaccctgagga 318
           |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 676 tcggcggacctagagcgggatcctggaggcgaccctgagga 636
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 278      tcgggggacctggagcgggatccagggggcgaccctgagga 318
                |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 23623686 tcggcggacctagagcgggatcctggaggcgaccctgagga 23623726



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 278      tcgggggacctggagcgggatccagggggcgaccctgagga 318
                |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 23618180 tcggcggacctagagcgggatcctggaggcgaccctgagga 23618220
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>dbj|AK065531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034H02, full
           insert sequence
          Length = 1250

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 278 tcgggggacctggagcgggatccagggggcgaccctgagga 318
           |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 853 tcggcggacctagagcgggatcctggaggcgaccctgagga 813
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 278      tcgggggacctggagcgggatccagggggcgaccctgagga 318
                |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 23551877 tcggcggacctagagcgggatcctggaggcgaccctgagga 23551917



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 278      tcgggggacctggagcgggatccagggggcgaccctgagga 318
                |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 23546371 tcggcggacctagagcgggatcctggaggcgaccctgagga 23546411
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>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157690

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 278   tcgggggacctggagcgggatccagggggcgaccctgagga 318
             |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 88230 tcggcggacctagagcgggatcctggaggcgaccctgagga 88190



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 278   tcgggggacctggagcgggatccagggggcgaccctgagga 318
             |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 82724 tcggcggacctagagcgggatcctggaggcgaccctgagga 82684
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>gb|BT016700.1| Zea mays clone Contig533 mRNA sequence
          Length = 1081

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 276 cgtcgggggacctggagcgggatccagg 303
           |||||| |||||||||||||||||||||
Sbjct: 829 cgtcggcggacctggagcgggatccagg 802
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>gb|AY105970.1| Zea mays PCO109569 mRNA sequence
          Length = 1186

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 276 cgtcgggggacctggagcgggatccagg 303
           |||||| |||||||||||||||||||||
Sbjct: 960 cgtcggcggacctggagcgggatccagg 933
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>ref|XM_657747.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5235.2), mRNA
          Length = 1410

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 109 aggttccaacagcaacaagcag 130
           ||||||||||||||||||||||
Sbjct: 544 aggttccaacagcaacaagcag 523
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>gb|AC102240.12| Mus musculus chromosome 18, clone RP24-122C12, complete sequence
          Length = 172481

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 225    ggcaactgcaaaggatgtaac 245
              |||||||||||||||||||||
Sbjct: 171399 ggcaactgcaaaggatgtaac 171379
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>gb|AC157910.4| Mus musculus chromosome 18, clone RP24-372A6, complete sequence
          Length = 180725

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 225   ggcaactgcaaaggatgtaac 245
             |||||||||||||||||||||
Sbjct: 97833 ggcaactgcaaaggatgtaac 97813
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>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 256354

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 94    atgctacagtccttaaggttc 114
             |||||||||||||||||||||
Sbjct: 67793 atgctacagtccttaaggttc 67773
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>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 237247

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    atgctacagtccttaaggttc 114
             |||||||||||||||||||||
Sbjct: 45973 atgctacagtccttaaggttc 45993
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>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21,
             complete sequence
          Length = 166475

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   aacagcaacaagcaggagcaa 136
             |||||||||||||||||||||
Sbjct: 77734 aacagcaacaagcaggagcaa 77754
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 116     aacagcaacaagcaggagcaa 136
               |||||||||||||||||||||
Sbjct: 7056543 aacagcaacaagcaggagcaa 7056563
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>gb|AY190949.1| Drosophila pseudoobscura clone DPSF01_8_J08 (D1424) genomic sequence
          Length = 42117

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    aaaggcttttctccaaataaa 31
             |||||||||||||||||||||
Sbjct: 19722 aaaggcttttctccaaataaa 19742
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>emb|CT027572.9| Zebrafish DNA sequence from clone CH73-52E5 in linkage group 2,
             complete sequence
          Length = 30251

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    catggtacataaatatgacag 86
             |||||||||||||||||||||
Sbjct: 26644 catggtacataaatatgacag 26664
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>gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 226269

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 54    acactccatacacatggtacataa 77
             |||| |||||||||||||||||||
Sbjct: 26945 acacaccatacacatggtacataa 26922
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>gb|AC007548.10| Drosophila melanogaster clone BACR48M17, complete sequence
          Length = 160022

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     taaatatgacagacacccca 94
              ||||||||||||||||||||
Sbjct: 156543 taaatatgacagacacccca 156524
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>gb|AC018631.3| Drosophila melanogaster clone BACR03I06, complete sequence
          Length = 169851

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    taaatatgacagacacccca 94
             ||||||||||||||||||||
Sbjct: 68667 taaatatgacagacacccca 68648
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>gb|AC010211.10| Drosophila melanogaster clone BACR26C09, complete sequence
          Length = 177855

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     taaatatgacagacacccca 94
              ||||||||||||||||||||
Sbjct: 136868 taaatatgacagacacccca 136849
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>gb|AC124360.5| Mus musculus BAC clone RP24-502M22 from chromosome 10, complete
             sequence
          Length = 184346

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 55    cactccatacacatggtacataaa 78
             |||| |||||||||||||||||||
Sbjct: 92292 cactgcatacacatggtacataaa 92269
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>emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chromosome 1 Contains the
             5' end of the SLICK gene for a sodium- and
             chloride-activated ATP-sensitive potassium channel,
             complete sequence
          Length = 185560

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tccaaataaagtacatggaaattg 45
             |||||||||| |||||||||||||
Sbjct: 94190 tccaaataaattacatggaaattg 94167
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>emb|BX571697.3| Zebrafish DNA sequence from clone DKEY-201M8 in linkage group 6,
             complete sequence
          Length = 83282

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    tacataaatatgacagacacccca 94
             ||||||||||||||||| ||||||
Sbjct: 21168 tacataaatatgacagagacccca 21191
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>gb|AC092190.1|AC092190 Drosophila melanogaster, chromosome X, region 20C-20D, BAC clone
              BACR08A09, complete sequence
          Length = 172266

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     taaatatgacagacacccca 94
              ||||||||||||||||||||
Sbjct: 114491 taaatatgacagacacccca 114472
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>gb|AC133961.3| Homo sapiens BAC clone RP13-494C23 from 4, complete sequence
          Length = 177787

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    tgacagacaccccatgctac 100
             ||||||||||||||||||||
Sbjct: 80891 tgacagacaccccatgctac 80910
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>gb|AC009316.3| Homo sapiens BAC clone RP11-562F14 from 2, complete sequence
          Length = 146204

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    tgacagacaccccatgctac 100
             ||||||||||||||||||||
Sbjct: 99961 tgacagacaccccatgctac 99942
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>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete
              sequence
          Length = 585533

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     taaatatgacagacacccca 94
              ||||||||||||||||||||
Sbjct: 353367 taaatatgacagacacccca 353386
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>gb|AE003574.6| Drosophila melanogaster chromosome X, section 73 of 74 of the complete
              sequence
          Length = 273468

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     taaatatgacagacacccca 94
              ||||||||||||||||||||
Sbjct: 251717 taaatatgacagacacccca 251736
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>gb|AE002665.5| Drosophila melanogaster chromosome 3L, section 83 of 83 of the complete
              sequence
          Length = 491220

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     taaatatgacagacacccca 94
              ||||||||||||||||||||
Sbjct: 101269 taaatatgacagacacccca 101288
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>dbj|AP000929.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-778B17, complete
              sequence
          Length = 197195

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     aataaagtacatggaaattg 45
              ||||||||||||||||||||
Sbjct: 196508 aataaagtacatggaaattg 196527
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>dbj|AP003781.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-49K4, complete
              sequence
          Length = 177748

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     aataaagtacatggaaattg 45
              ||||||||||||||||||||
Sbjct: 165676 aataaagtacatggaaattg 165695
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>gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 of 118 of the complete
              sequence
          Length = 292632

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     taaatatgacagacacccca 94
              ||||||||||||||||||||
Sbjct: 138209 taaatatgacagacacccca 138228
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>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete
             sequence
          Length = 198426

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   aacaagcaatacaacacaac 172
             ||||||||||||||||||||
Sbjct: 71663 aacaagcaatacaacacaac 71682
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>gb|CP000211.1| Drosophila melanogaster genomic scaffold 211000022280777
          Length = 214697

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     taaatatgacagacacccca 94
              ||||||||||||||||||||
Sbjct: 211468 taaatatgacagacacccca 211487
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>gb|CP000192.1| Drosophila melanogaster genomic scaffold 211000022280527
          Length = 181593

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    taaatatgacagacacccca 94
             ||||||||||||||||||||
Sbjct: 89910 taaatatgacagacacccca 89929
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>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     tacataaatatgacagacacccca 94
              ||||||||||||||||| ||||||
Sbjct: 167982 tacataaatatgacagagacccca 168005
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>gb|AC171730.1| Lycopersicon esculentum chromosome 01 clone C01HBa0256E08, complete
              sequence
          Length = 147630

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aatcaactcaaaggcttttc 21
              ||||||||||||||||||||
Sbjct: 133511 aatcaactcaaaggcttttc 133492


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,874,763
Number of Sequences: 3902068
Number of extensions: 2874763
Number of successful extensions: 53505
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53381
Number of HSP's gapped (non-prelim): 124
length of query: 331
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 309
effective length of database: 17,147,199,772
effective search space: 5298484729548
effective search space used: 5298484729548
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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