>DCUP_YERPE (Q8ZAQ7) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)|
          Length = 355

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = -1

Query: 386 DVQQRKLFRVCITVTVL*TDI----PLLALHLYIAMGHGPRFM-PYSPRRDIHKL 237
           +V  + L R  +   +L +DI      + L LY   G GPRF  P + R D+ KL
Sbjct: 58  EVTMQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKL 112

>NU5M_CHIMO (Q94RJ2) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 612

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -1

Query: 332 TDIPLLALHLYIAMGHGPRFMPYSPRRDIHKL 237
           T I  L L  +  MGH PRF+P SP  + HKL
Sbjct: 421 TAIYSLRLISFTMMGH-PRFLPVSPINENHKL 451

>ATP6_ALBCO (P48893) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 214

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +3

Query: 228 LTTQFMDVPSRAIWHKPWSMSHGNVQMES*QRYVSLQYCNSDTHTKKFSLLYI 386
           LT  F+ V    IW+K WSM   N+      +Y++    N+ T+    SLL I
Sbjct: 19  LTPMFLSV--FMIWNKTWSMDQNNI-----IKYLAASNWNNSTYNLTKSLLTI 64

>COX10_YARLI (Q6C0L2) Protoheme IX farnesyltransferase, mitochondrial precursor|
           (EC 2.5.1.-) (Heme O synthase)
          Length = 471

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 123 CRDCCVYSVC-WWHVFAAKMCNKLMMWWSF 37
           C     Y+V  WW V  + + N  M WW+F
Sbjct: 374 CVGLSYYNVTDWWFVLDSSVLNAWMAWWAF 403

>MRP4_ARATH (Q7DM58) Multidrug resistance-associated protein 4 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 4)
            (ATP-energized glutathione S-conjugate pump 4)
          Length = 1516

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = +3

Query: 201  VGNDQPYVELTTQFMDVPSRAIWHKPWSMS------HGNVQME 311
            V N    VE   QF D+PS + W +  ++       HGNV +E
Sbjct: 1235 VENKMVSVERIKQFTDIPSESEWERKETLPPSNWPFHGNVHLE 1277

>MURD_SYNEL (Q8DMN8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 454

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
 Frame = +2

Query: 245 GCPVSGYMA*---TLVHVPWQC---TDGELTTVCQSTVL*Q 349
           G PV G +A    TL H+PW C   T+G+ TT   +  + Q
Sbjct: 94  GIPVRGEVAIAWQTLAHLPWVCITGTNGKTTTTALTAAIFQ 134


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,523,512
Number of Sequences: 219361
Number of extensions: 1019968
Number of successful extensions: 1918
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)