ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl02e01 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 107 bits (268), Expect = 1e-23 Identities = 52/68 (76%), Positives = 56/68 (82%) Frame = -3 Query: 469 KALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTAR 290 KALE FKRF +L IE +VV MN DP+LKNR GPAKFPYMLLYPNTSDH G A GLTA+ Sbjct: 795 KALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAK 854 Query: 289 GIPNSISI 266 GIPNSISI Sbjct: 855 GIPNSISI 862
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 104 bits (260), Expect = 1e-22 Identities = 52/69 (75%), Positives = 55/69 (79%) Frame = -3 Query: 472 AKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTA 293 AKALEAFKRFGA+L IE +VVAMN DP KNR GP FPY LLYPNTSD G A GL+A Sbjct: 802 AKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSA 861 Query: 292 RGIPNSISI 266 RGIPNSISI Sbjct: 862 RGIPNSISI 870
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 99.8 bits (247), Expect = 3e-21 Identities = 48/68 (70%), Positives = 55/68 (80%) Frame = -3 Query: 469 KALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTAR 290 KALEAFKRF +L IE +V+ MN DP LKNR GPA FPY L++PNTSD+ G AEG+TAR Sbjct: 796 KALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITAR 855 Query: 289 GIPNSISI 266 GIPNSISI Sbjct: 856 GIPNSISI 863
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 99.4 bits (246), Expect = 4e-21 Identities = 49/69 (71%), Positives = 56/69 (81%) Frame = -3 Query: 472 AKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTA 293 A+ALEAF+RF +L IE +VV MN D LKNR GPA+FPYMLLYPNTSD TG A G+TA Sbjct: 798 ARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITA 857 Query: 292 RGIPNSISI 266 +GIPNSISI Sbjct: 858 KGIPNSISI 866
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 90.5 bits (223), Expect = 2e-18 Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 1/70 (1%) Frame = -3 Query: 472 AKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQ-AEGLT 296 AKAL+AFKRFG++L IE ++ MN + LKNR GP K PYMLLYPNTSD T + +GLT Sbjct: 808 AKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLT 867 Query: 295 ARGIPNSISI 266 A GIPNSISI Sbjct: 868 AMGIPNSISI 877
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 83.2 bits (204), Expect = 3e-16 Identities = 43/68 (63%), Positives = 49/68 (72%) Frame = -3 Query: 469 KALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTAR 290 KALEAFKRFG+KL GIE ++ A NSDP L+NRTGP + PY LL H EGLT + Sbjct: 803 KALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL------HRSSEEGLTFK 856 Query: 289 GIPNSISI 266 GIPNSISI Sbjct: 857 GIPNSISI 864
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 81.3 bits (199), Expect = 1e-15 Identities = 43/69 (62%), Positives = 49/69 (71%) Frame = -3 Query: 472 AKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTA 293 A LEAFKRFG KLE IEK+++ N D L+NR GPAK PY LLYP++ EGLT Sbjct: 791 AGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSE------EGLTF 844 Query: 292 RGIPNSISI 266 RGIPNSISI Sbjct: 845 RGIPNSISI 853
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 77.4 bits (189), Expect = 2e-14 Identities = 39/68 (57%), Positives = 47/68 (69%) Frame = -3 Query: 469 KALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTAR 290 KAL+AFKRFG KL+ IE++++ N D L+NR GP K PY +L P D EGLT R Sbjct: 800 KALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCED-----EGLTFR 854 Query: 289 GIPNSISI 266 GIPNSISI Sbjct: 855 GIPNSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 76.3 bits (186), Expect = 4e-14 Identities = 39/68 (57%), Positives = 49/68 (72%) Frame = -3 Query: 469 KALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTAR 290 +ALEAFK+FG KL IEK++ N+D +L+NR GP + PY LLYP++ EGLT R Sbjct: 800 RALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSK------EGLTFR 853 Query: 289 GIPNSISI 266 GIPNSISI Sbjct: 854 GIPNSISI 861
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 74.3 bits (181), Expect = 1e-13 Identities = 38/65 (58%), Positives = 45/65 (69%) Frame = -3 Query: 460 EAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIP 281 EAFKRFG KL IE+++ N+D L+NR GP K PY LLYP++ EGLT RGIP Sbjct: 808 EAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSE------EGLTCRGIP 861 Query: 280 NSISI 266 NSISI Sbjct: 862 NSISI 866
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 73.9 bits (180), Expect = 2e-13 Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%) Frame = -3 Query: 472 AKALEAFKRFGAKLEGIEKQVVAMNSDPQLK-NRTGPAKFPYMLLYPNTSDHTGQAEGLT 296 +KAL+AF++FG KL+ IE+++V N+DP L+ NR GP + PY LLYP++ EGLT Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSE------EGLT 829 Query: 295 ARGIPNSISI 266 RGIPNSISI Sbjct: 830 FRGIPNSISI 839
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 73.9 bits (180), Expect = 2e-13 Identities = 37/69 (53%), Positives = 49/69 (71%) Frame = -3 Query: 472 AKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTA 293 +KAL+AF++FG KL+ IE+++ N+D L NR GP + PY LL+PN +EGLT Sbjct: 804 SKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPN-------SEGLTC 856 Query: 292 RGIPNSISI 266 RGIPNSISI Sbjct: 857 RGIPNSISI 865
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 72.0 bits (175), Expect = 7e-13 Identities = 38/68 (55%), Positives = 47/68 (69%) Frame = -3 Query: 469 KALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTAR 290 +ALEAFKRFG KL IE ++ N+D +L+NR GP + PY LL P++ EGLT R Sbjct: 796 RALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSK------EGLTFR 849 Query: 289 GIPNSISI 266 GIPNSISI Sbjct: 850 GIPNSISI 857
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 71.2 bits (173), Expect = 1e-12 Identities = 38/63 (60%), Positives = 44/63 (69%) Frame = -3 Query: 472 AKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTA 293 A LEAFKRFG KL IEK++V N+D L+NRTGPAK PY LLYP++ EGLT Sbjct: 685 AGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSE------EGLTF 738 Query: 292 RGI 284 RGI Sbjct: 739 RGI 741
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 70.5 bits (171), Expect = 2e-12 Identities = 36/69 (52%), Positives = 48/69 (69%) Frame = -3 Query: 472 AKALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTA 293 +KAL+AF++FG KL IE ++ N+DP L +R GP + PY LL+P++ EGLT Sbjct: 802 SKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSK------EGLTF 855 Query: 292 RGIPNSISI 266 RGIPNSISI Sbjct: 856 RGIPNSISI 864
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 69.3 bits (168), Expect = 5e-12 Identities = 35/68 (51%), Positives = 46/68 (67%) Frame = -3 Query: 469 KALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTAR 290 +ALEAF++FG K++ IEK + N D LKNRTG K PY LL+P++ G+T R Sbjct: 798 EALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG------GVTGR 851 Query: 289 GIPNSISI 266 GIPNS+SI Sbjct: 852 GIPNSVSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 66.2 bits (160), Expect = 4e-11 Identities = 34/66 (51%), Positives = 41/66 (62%) Frame = -3 Query: 463 LEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 284 L AF RFG KL IEKQ++ N D L NR+GP PY LL+P + GLT +GI Sbjct: 802 LAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG------GLTGKGI 855 Query: 283 PNSISI 266 PNS+SI Sbjct: 856 PNSVSI 861
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 65.9 bits (159), Expect = 5e-11 Identities = 33/66 (50%), Positives = 42/66 (63%) Frame = -3 Query: 463 LEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 284 L AF+RFG L IE +++ MNS KNR+GP PY LL+P + EGLT +GI Sbjct: 800 LVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSE------EGLTGKGI 853 Query: 283 PNSISI 266 PNS+SI Sbjct: 854 PNSVSI 859
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 65.5 bits (158), Expect = 7e-11 Identities = 34/66 (51%), Positives = 42/66 (63%) Frame = -3 Query: 463 LEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 284 L AF+RFG KL IEKQ++ N + L NRTGP PY LL+P + GLT +GI Sbjct: 801 LAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG------GLTGKGI 854 Query: 283 PNSISI 266 PNS+SI Sbjct: 855 PNSVSI 860
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 49.7 bits (117), Expect = 4e-06 Identities = 24/67 (35%), Positives = 38/67 (56%) Frame = -3 Query: 466 ALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARG 287 AL A + F A + E+++ N+DP +NR G PY L+ P++ G+T RG Sbjct: 839 ALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSS------GPGITCRG 892 Query: 286 IPNSISI 266 +PNS++I Sbjct: 893 VPNSVTI 899
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 48.5 bits (114), Expect = 9e-06 Identities = 27/64 (42%), Positives = 37/64 (57%) Frame = -3 Query: 457 AFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPN 278 AF++F +L+ E + N++P+ KNR G PY LL P + G+T RGIPN Sbjct: 839 AFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSE------PGVTGRGIPN 892 Query: 277 SISI 266 SISI Sbjct: 893 SISI 896
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 47.0 bits (110), Expect = 3e-05 Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = -3 Query: 460 EAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTG----QAEGLTA 293 +AF+ F I +QV N+DP KNR G PY+LL P+ D T + + Sbjct: 868 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVME 927 Query: 292 RGIPNSISI 266 GIPNSISI Sbjct: 928 MGIPNSISI 936
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 45.4 bits (106), Expect = 7e-05 Identities = 26/64 (40%), Positives = 34/64 (53%) Frame = -3 Query: 457 AFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPN 278 A+ F A+L+ IE + N D +LKNR G PY L+ P + G+T GIPN Sbjct: 867 AYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------SGVTGMGIPN 920 Query: 277 SISI 266 S SI Sbjct: 921 STSI 924
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/64 (40%), Positives = 34/64 (53%) Frame = -3 Query: 457 AFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPN 278 A+ F A+L+ IE + N D +LKNR G PY L+ P + G+T GIPN Sbjct: 884 AYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------AGVTGMGIPN 937 Query: 277 SISI 266 S SI Sbjct: 938 STSI 941
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/67 (38%), Positives = 35/67 (52%) Frame = -3 Query: 466 ALEAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARG 287 A+ A F A + E+ + N+D KNR G PY LL P++ G+T RG Sbjct: 858 AVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSS------PPGVTCRG 911 Query: 286 IPNSISI 266 +PNSISI Sbjct: 912 VPNSISI 918
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 43.5 bits (101), Expect = 3e-04 Identities = 28/64 (43%), Positives = 36/64 (56%) Frame = -3 Query: 457 AFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPN 278 AF+RF KL+ +E + N + LKNR G Y LL P TS+H G+T G+P Sbjct: 839 AFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKP-TSEH-----GVTGMGVPY 892 Query: 277 SISI 266 SISI Sbjct: 893 SISI 896
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 43.5 bits (101), Expect = 3e-04 Identities = 26/65 (40%), Positives = 36/65 (55%) Frame = -3 Query: 460 EAFKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIP 281 +AF+ F K+ I +QV N D +NR G PY+LL P + + A+ + GIP Sbjct: 869 KAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP-LNGNPMDAKTVMEMGIP 927 Query: 280 NSISI 266 NSISI Sbjct: 928 NSISI 932
>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 582 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/40 (50%), Positives = 23/40 (57%) Frame = +2 Query: 245 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 364 T DVL DG VR G +G+SR+V V EQH ELG Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 2.4 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -2 Query: 368 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 279 A P H A P L H +G HRQGHPE Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 2.4 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -2 Query: 368 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 279 A P H A P L H +G HRQGHPE Sbjct: 231 APNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>UD12_MOUSE (P70691) UDP-glucuronosyltransferase 1-2 precursor (EC 2.4.1.17)| (UDPGT) (UGT1*0) (UGT1-02) (UGT1.2) (UGT1A2) (Bilirubin specific) Length = 533 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +3 Query: 372 VRFLSCGSEFMATTCFSMPSSFAPNRLNASS 464 +R LSCG E+ AT C PSS+ PN L S Sbjct: 172 LRSLSCGIEYEATQC-PNPSSYIPNLLTRLS 201
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 29.3 bits (64), Expect = 5.4 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = -2 Query: 392 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHIHL 264 P+ PHR +P H P+H PH H Q HP H H+ Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425
>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (Motch B) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2470 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 7/53 (13%) Frame = -3 Query: 193 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSVHRRVQK 56 C+C C ++ C++N G CT GL G + L AG+ V+ V K Sbjct: 704 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDK 756
>SPIKE_CVBM (P15777) Spike glycoprotein precursor (Peplomer protein) (E2)| [Contains: Spike protein S1 (90B); Spike protein S2 (90A)] Length = 1363 Score = 29.3 bits (64), Expect = 5.4 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Frame = +3 Query: 228 KSMRSRRRTCSDQMDMLFGMPLA---VSPSACPVWSEVFG*SSMYGNLAGPVRFLSCGSE 398 +S R T + + + +P A VS W+ FG + + PV + Sbjct: 414 QSFNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNRRFGFTEQFVFKPQPVGVFTHHDV 473 Query: 399 FMATTCFSMPSSFAPNRLNAS 461 A CF PS+F P +L+ S Sbjct: 474 VYAQHCFKAPSNFCPCKLDGS 494
>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (hN2) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2471 Score = 28.9 bits (63), Expect = 7.1 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%) Frame = -3 Query: 193 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSVHRRVQK 56 C+C C ++ C++N G CT GL G + L AG+ ++ V K Sbjct: 706 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDK 758
>FRIZ3_DROME (O77438) Protein frizzled-3 precursor (dFz3)| Length = 581 Score = 28.9 bits (63), Expect = 7.1 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Frame = -3 Query: 349 MLLYPNTSDHTGQ--AEGLTARGIPNSISI*SEHVRR---RDLMLLCYPCLLTPELACVC 185 M PN + HT Q AE A+ +P S S R L LC P + P AC Sbjct: 55 MTALPNLAGHTNQLEAELQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKL 114 Query: 184 VCDRELCRCMNN 149 +C+ CM N Sbjct: 115 LCETVRGECMEN 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,583,028 Number of Sequences: 219361 Number of extensions: 1382214 Number of successful extensions: 3887 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3857 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
