Clone Name | rbastl02d09 |
---|---|
Clone Library Name | barley_pub |
>VG12_SHV21 (P24915) Hypothetical gene 12 protein| Length = 169 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -3 Query: 361 ILFVVCFRYSACSLCSCMK*WTTMYYWDSPLLVDEKYHSFY 239 I+ VC C LC + T+ W S +L E Y++FY Sbjct: 76 IVLCVCVSTLLCILCILLDICLTIRLWQSSVLCYEVYNTFY 116
>NIN_HUMAN (Q8N4C6) Ninein (hNinein)| Length = 2090 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 297 VHHFIHEHKEQAEYLKQTTNKIEVMKAPKL 386 VHH I E K++ +YL+ T +E +KA ++ Sbjct: 1380 VHHVIEECKQENQYLEGNTQLLEKVKAHEI 1409
>YWV1_CAEEL (Q11075) Hypothetical protein B0403.1| Length = 198 Score = 28.9 bits (63), Expect = 3.0 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 409 FSKHVFYVSFGAFITSILFVVCFRYSACSL 320 F KH+ YVS AF+ + CFR++ SL Sbjct: 23 FQKHIEYVSNSAFLKCRQLLRCFRFTNVSL 52
>Y098_NPVOP (O10343) Hypothetical 36.0 kDa protein (ORF99)| Length = 313 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 376 AFITSILFVVCFRYSACSLCSCMK*WTTMYYWDSPLL 266 AF T +L VC ++ +C+K W T++ + PLL Sbjct: 83 AFKTPVLGHVCVLQHKPAMYACLKEWYTLFEFQVPLL 119
>CID16_SCHPO (O13798) Caffeine-induced protein 16| Length = 1202 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 286 YWDSPLLVDEKYHSFYCVT*WCNIYHFY 203 YW S L+D+ +H+F WC + FY Sbjct: 1026 YWASNRLIDKTHHAFPSSYTWCIMVIFY 1053
>RNFC_BUCAI (P57215) Electron transport complex protein rnfC| Length = 473 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/53 (37%), Positives = 28/53 (52%) Frame = +2 Query: 53 IDSASKNSLKIKLVNNFKNLVIQKK*PKGKLNTEVETLTGSG*EKYTAHSIEM 211 I S SK IK + FK +I+KK P G V++LTG + HSI++ Sbjct: 178 IQSISKIQHLIKNKSLFKICIIKKKYPAGSSKVLVKSLTGKE-VPHGKHSIDI 229
>YNO4_YEAST (P53907) Hypothetical 84.2 kDa protein in MFA2-MEP2 intergenic| region Length = 740 Score = 27.3 bits (59), Expect = 8.8 Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 21/143 (14%) Frame = +2 Query: 8 ELCRLLTFYLTNPSQIDSASKNSLKIKLVNNFKNLVIQKK*PKGKLNTEVETLTGSG*EK 187 + C L T L N + DS+S+ + N+ I +K +LN+ E + +G Sbjct: 418 DFCGLFTSKLRNFFKTDSSSRKN---------SNMDIGQKMRSKELNSVQEEIDDNGSTT 468 Query: 188 YTAHSIEMINITPLGHAIKRMIFFIHQKW-------GIPVIHCSPS------FHTRAQRT 328 T S+ +P H++ IH+ + I + C S F + T Sbjct: 469 NTNTSVLSSTFSPTAHSVLTAQTSIHENFRSRSNSNPIDPLRCDRSVLKINNFEPVYEGT 528 Query: 329 SRVSKTNN--------KQNRGNE 373 R + +N+ K NRGNE Sbjct: 529 GRSTISNSAERTNREEKLNRGNE 551
>CCL11_HORSE (Q9TTQ4) Eotaxin precursor (Small inducible cytokine A11) (CCL11)| Length = 100 Score = 27.3 bits (59), Expect = 8.8 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 Query: 136 RQAKY*SRDPNRKWVREIYSSLDRNDK 216 +QAK DP +KWV++ LD N + Sbjct: 67 KQAKKICADPKQKWVQDAMKYLDENSR 93
>IF2_STRT2 (Q5M5V5) Translation initiation factor IF-2| Length = 943 Score = 27.3 bits (59), Expect = 8.8 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Frame = +2 Query: 314 RAQRTSRVSKTNNKQ---NRGNESPKANIENMF 403 R QR S +K NK+ NRGN +PK E F Sbjct: 323 RNQRNSNWNKNKNKKGKNNRGNSAPKPVTERKF 355
>IF2_STRT1 (Q5M1B9) Translation initiation factor IF-2| Length = 943 Score = 27.3 bits (59), Expect = 8.8 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Frame = +2 Query: 314 RAQRTSRVSKTNNKQ---NRGNESPKANIENMF 403 R QR S +K NK+ NRGN +PK E F Sbjct: 323 RNQRNSNWNKNKNKKGKNNRGNSAPKPVTERKF 355
>KLOTB_HUMAN (Q86Z14) Beta klotho (BetaKlotho) (Klotho beta-like protein)| Length = 1044 Score = 27.3 bits (59), Expect = 8.8 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3 Query: 295 TMYYWDSPLLVDEKY 251 T+Y+WD PL + EKY Sbjct: 192 TLYHWDLPLALQEKY 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,380,278 Number of Sequences: 219361 Number of extensions: 943673 Number of successful extensions: 2474 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2474 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)