>gb|BT016334.1| Zea mays clone Contig167 mRNA sequence
          Length = 1269

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 303 ctgccatgttgcggattacatagggcaggatgcctccatggttgtagtaggcca 356
           |||||| ||||||||| ||||| || |||||||||||||||||| |||| ||||
Sbjct: 879 ctgccaagttgcggatgacataagggaggatgcctccatggttgaagtacgcca 826

>gb|BT024088.1| Zea mays clone EL01N0553G09 mRNA sequence
          Length = 1988

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 303  ctgccatgttgcggattacatagggcaggatgcctccatggttgtagtaggcca 356
            |||||| ||||||||| ||||| || |||||||||||||||||| |||| ||||
Sbjct: 1636 ctgccaagttgcggatgacataagggaggatgcctccatggttgaagtacgcca 1583

>gb|AY104770.1| Zea mays PCO074909 mRNA sequence
          Length = 3628

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 303  ctgccatgttgcggattacatagggcaggatgcctccatggttgtagtaggcca 356
            |||||| ||||||||| ||||| || |||||||||||||||||| |||| ||||
Sbjct: 3024 ctgccaagttgcggatgacataagggaggatgcctccatggttgaagtacgcca 2971

>ref|XM_480473.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2697

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 305  gccatgttgcggattacatagggcaggatgcctccatggttgtagtaggcca 356
            |||| ||||||||| || || || |||||||||||||||||| |||| ||||
Sbjct: 2687 gccaggttgcggatgacgtatgggaggatgcctccatggttgaagtatgcca 2636

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                   
Query: 305     gccatgttgcggattacatagggcaggatgcctccatggttgtagtaggcca 356
               |||| ||||||||| || || || |||||||||||||||||| |||| ||||
Sbjct: 5321761 gccaggttgcggatgacgtatgggaggatgcctccatggttgaagtatgcca 5321812

>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0610E02
          Length = 135816

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                  
Query: 305    gccatgttgcggattacatagggcaggatgcctccatggttgtagtaggcca 356
              |||| ||||||||| || || || |||||||||||||||||| |||| ||||
Sbjct: 113349 gccaggttgcggatgacgtatgggaggatgcctccatggttgaagtatgcca 113400

>dbj|AK059070.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H03, full
           insert sequence
          Length = 514

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 305 gccatgttgcggattacatagggcaggatgcctccatggttgtagtaggcca 356
           |||| ||||||||| || || || |||||||||||||||||| |||| ||||
Sbjct: 73  gccaggttgcggatgacgtatgggaggatgcctccatggttgaagtatgcca 22

>dbj|AB236788.1| Trifolium pratense RNA for putative cytoplasmic aconitate
           hydratase, partial cds, clone: C1842
          Length = 1248

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 320 acatagggcaggatgcctccatggtt 345
           |||||||| |||||||||||||||||
Sbjct: 923 acatagggaaggatgcctccatggtt 898

>gb|AC017067.4|AC017067 Homo sapiens BAC clone RP11-370B11 from 9, complete sequence
          Length = 191373

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    gtttttagcacaaagcaatgt 42
             |||||||||||||||||||||
Sbjct: 32401 gtttttagcacaaagcaatgt 32381

>gb|AY104037.1| Zea mays PCO139346 mRNA sequence
          Length = 2256

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 323  tagggcaggatgcctccatggttgtagta 351
            ||||| |||||||||||||||||| ||||
Sbjct: 1718 tagggaaggatgcctccatggttgaagta 1690

>gb|AC104540.9| Mus musculus chromosome 5, clone RP23-301P15, complete sequence
          Length = 221681

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aaatgaacacatgtttcata 109
             ||||||||||||||||||||
Sbjct: 17637 aaatgaacacatgtttcata 17656

>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ccagttcaaatatgttttta 28
              ||||||||||||||||||||
Sbjct: 987023 ccagttcaaatatgttttta 987042

>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15,
              complete sequence
          Length = 179357

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     aagatttgctcaaaatgaac 97
              ||||||||||||||||||||
Sbjct: 112361 aagatttgctcaaaatgaac 112342

>gb|AC158149.3| Mus musculus chromosome 5, clone RP24-296L6, complete sequence
          Length = 155517

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     aaatgaacacatgtttcata 109
              ||||||||||||||||||||
Sbjct: 122262 aaatgaacacatgtttcata 122281

>emb|BX914212.8| Zebrafish DNA sequence from clone CH211-105P7 in linkage group 18,
             complete sequence
          Length = 67940

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   tgtttcataaccacaaccaa 120
             ||||||||||||||||||||
Sbjct: 22022 tgtttcataaccacaaccaa 22003

>emb|CR385067.9| Zebrafish DNA sequence from clone CH211-79A21 in linkage group 12,
              complete sequence
          Length = 203410

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     aagatttgctcaaaatgaac 97
              ||||||||||||||||||||
Sbjct: 103961 aagatttgctcaaaatgaac 103980

>emb|BX897688.7| Zebrafish DNA sequence from clone DKEY-127J5, complete sequence
          Length = 70570

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    actgaagatttgctcaaaatgaac 97
             |||||||||||| |||||||||||
Sbjct: 57923 actgaagatttgttcaaaatgaac 57946

>gb|AC091135.9| Homo sapiens chromosome 18, clone RP11-289E15, complete sequence
          Length = 166207

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   atttctgagctcctgccatgttgc 314
             |||||||| |||||||||||||||
Sbjct: 23473 atttctgaactcctgccatgttgc 23496

>gb|AC146884.3| Callithrix jacchus clone CH259-252N7, complete sequence
          Length = 219392

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ccagttcaaatatgttttta 28
              ||||||||||||||||||||
Sbjct: 111685 ccagttcaaatatgttttta 111704

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     cataaggccacaacataatg 205
               ||||||||||||||||||||
Sbjct: 5020365 cataaggccacaacataatg 5020384

>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1172G12
          Length = 171974

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   cataaggccacaacataatg 205
             ||||||||||||||||||||
Sbjct: 62479 cataaggccacaacataatg 62498

>emb|BX005271.9| Zebrafish DNA sequence from clone CH211-145F15 in linkage group 5,
             complete sequence
          Length = 162019

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    actgaagatttgctcaaaatgaac 97
             |||||||||||| |||||||||||
Sbjct: 22223 actgaagatttgttcaaaatgaac 22246

>emb|BX323582.13| Zebrafish DNA sequence from clone CH211-143E19 in linkage group 18,
             complete sequence
          Length = 80226

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tgtttcataaccacaaccaa 120
             ||||||||||||||||||||
Sbjct: 38806 tgtttcataaccacaaccaa 38825

>gb|AC148186.3| Saimiri boliviensis boliviensis clone CH254-359M10, complete sequence
          Length = 189199

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ccagttcaaatatgttttta 28
             ||||||||||||||||||||
Sbjct: 69105 ccagttcaaatatgttttta 69124

>gb|AC150597.4| Aotus nancymaae clone CH258-191N23, complete sequence
          Length = 97432

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ccagttcaaatatgttttta 28
             ||||||||||||||||||||
Sbjct: 31726 ccagttcaaatatgttttta 31745


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,287,771
Number of Sequences: 3902068
Number of extensions: 3287771
Number of successful extensions: 57725
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57649
Number of HSP's gapped (non-prelim): 76
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)